mRNA_P-wetherbeei_contig16055.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16055.1.1
Unique NamemRNA_P-wetherbeei_contig16055.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A812XMA3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XMA3_SYMMI)

HSP 1 Score: 160 bits (406), Expect = 7.870e-47
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 1
Query:   34 DIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            D+V L YD LV G DLSD I  AF  D LG+L V GVP L+E R  LLPL+   ANL  +++ +Y HA S +SFGWSHGKE L+G  DLSKGS+YANPQ+DRPVDDE++IA +P F HPN+W
Sbjct:   15 DVVVLQYDKLVAGEDLSDQIEMAFSVDGLGVLTVEGVPGLEEARNGLLPLAREFANLPDDIKDKYVHAESYYSFGWSHGKEKLDGNFDLSKGSYYANPQHDRPVDDEDLIAKFPAFLHPNIW 136          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A7S4BCQ1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCQ1_CHRCT)

HSP 1 Score: 153 bits (386), Expect = 8.160e-44
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 1
Query:   34 DIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            DIV L Y+DL+ G DL+ +I RAFG D +GIL VAGVP + + R RLLPL+HR A L  + + +YEHA S ++ GWS G+E L+GRPD+SKGS+YANP  D+P DD   IAA+P FA PN+W
Sbjct:   13 DIVVLQYEDLLAGSDLTAEIERAFGYDGMGILTVAGVPGISDARDRLLPLAHRFAMLPEKTKAKYEHAGSFYAVGWSFGREKLQGRPDVSKGSYYANPLQDKPFDDAATIAAHPAFAEPNIW 134          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A7S2G9H5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9H5_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.190e-43
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 1
Query:   34 DIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            +IV L+Y DL  G DL+  I  AF SD LGIL V+ +P L   R RLLPL+ R A L  EV+  +EH  S ++FGWSHG+E L+G+PDL+KGS+YANPQYDRPVDDE +I  YP F HPN+W
Sbjct:   33 NIVCLSYKDLKSGVDLTSQIEEAFSSDGLGILTVSDIPHLSVCRSRLLPLARRFAMLPGEVKESFEHPESFYAFGWSHGREKLQGKPDLAKGSYYANPQYDRPVDDESLIQQYPAFIHPNIW 154          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A7S4EZ27_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ27_CHRCT)

HSP 1 Score: 153 bits (386), Expect = 8.400e-43
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 1
Query:   34 DIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            DIV L Y+DL+ G DL+ +I RAFG D +GIL VAGVP + + R RLLPL+HR A L  + + +YEHA S ++ GWS G+E L+GRPD+SKGS+YANP  D+P DD   IAA+P FA PN+W
Sbjct:   13 DIVVLQYEDLLAGSDLTAEIERAFGYDGMGILTVAGVPGISDARDRLLPLAHRFAMLPEKTKAKYEHAGSFYAVGWSFGREKLQGRPDVSKGSYYANPLQDKPFDDAATIAAHPAFAEPNIW 134          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A2P6N312_9EUKA (DIOX_N domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N312_9EUKA)

HSP 1 Score: 153 bits (386), Expect = 1.540e-42
Identity = 73/127 (57.48%), Postives = 88/127 (69.29%), Query Frame = 1
Query:   22 STATDIVTLAYDDLVK-GFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            S   ++V + Y+ L     D+SD I +AFG D +GIL V GVPT  E RR LLPLS + A L  EV+ +  HA S FSFGWSHGKE LEG+PD SKGS+Y NP YDRP DDE +I  +PTFAHPN+W
Sbjct:   12 SAVEEVVVIQYEQLTDPSSDVSDLIEKAFGPDGIGILAVRGVPTFPEKRRALLPLSRQFALLPDEVKEKTVHASSCFSFGWSHGKEKLEGKPDYSKGSYYNNPVYDRPFDDENIIKEHPTFAHPNIW 138          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A7S2SF68_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SF68_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.510e-42
Identity = 70/124 (56.45%), Postives = 89/124 (71.77%), Query Frame = 1
Query:   28 ATDIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            +T +V L +  L +G DLSD +ARA+  D LGIL V+ +P L+E R  LLPL+ R A L    + +YEH  S +SFGWSHGKE L+G+PDL+KGSFYANPQYDRPVDDE +I  +  F HPN+W
Sbjct:   39 STGLVNLDFAALSRGDDLSDAVARAYSYDGLGILTVSNIPGLEERRAALLPLAKRFAELPETTKAKYEHPESFYSFGWSHGKEKLQGKPDLAKGSFYANPQYDRPVDDEALIQQFTPFIHPNIW 162          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A7S2N0B3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N0B3_9EUKA)

HSP 1 Score: 145 bits (366), Expect = 2.310e-41
Identity = 67/120 (55.83%), Postives = 90/120 (75.00%), Query Frame = 1
Query:   40 VTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            + L+YD LV+  DLS DI RAFG+D +G+L V+GVP L E R +LLPLS R A+L  +VR  YE+  + +S GWSHG+E ++GR D +KGS+YANP +++PVDDE +I  YPTFA PN+W
Sbjct:    6 IELSYDALVRDDDLSADIERAFGTDGIGLLTVSGVPGLAEARAKLLPLSQRFASLPEDVRASYENPSAFYSRGWSHGREKVQGRFDFAKGSYYANPLHNKPVDDEALIKRYPTFAAPNVW 125          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: L8HGG8_ACACA (DIOX_N domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGG8_ACACA)

HSP 1 Score: 145 bits (366), Expect = 1.500e-39
Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 1
Query:   37 IVTLAYDDLVK-GFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            +V L Y DL +   DLS  I  A+G + LGIL V GVP   ++R  LLPL H+ A    EV+++ EH  S++SFGWSHGKE LEG+PD SKGS+Y NP YDRP DDEE+I  YP+F HPN+W
Sbjct:   19 VVVLNYSDLEQPNVDLSAAIEEAYGFNGLGILAVRGVPNFMQLRGELLPLIHKFATQPEEVKKKTEHLESSYSFGWSHGKEVLEGKPDFSKGSYYNNPVYDRPFDDEELIKKYPSFCHPNIW 140          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A8J6C695_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C695_DIALT)

HSP 1 Score: 142 bits (357), Expect = 3.090e-38
Identity = 70/123 (56.91%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   37 IVTLAYDDLVKGFDLSDDIARAFGSD-ALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEG-RPDLSKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW 399
            +VTL ++ L++G DLS  IA AFG+D +LGIL V+GVP L  +R RLLPL+   A L  +VR  +EHAPS ++ GWSHGKE L G  PDL+KGS+Y NP Y+RP DDE +IA +P+FA PN+W
Sbjct:    9 VVTLEFEALLRGDDLSARIAEAFGADESLGILTVSGVPGLTPLRERLLPLAREFARLPADVRAAHEHAPSFYAVGWSHGKEKLGGGAPDLAKGSYYNNPLYNRPFDDEALIARFPSFAAPNVW 131          
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Match: A0A662Y240_9STRA (DIOX_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y240_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.240e-37
Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query:   28 ATDIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPTLKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDLSKGSFYANPQYDRPVD-DEEVIAAYPTFAHPNMW 399
            A D+  +AY+DLV   DLS  I  AFG + +GIL+V+GVP L   R  LLPL+ + ANL  EV+ +   A + +S GWSHGKE+L+G+PD SKGS+Y NP+ +   D DE++IA YP+F HPN+W
Sbjct:   10 ARDVPVIAYEDLVAKADLSSVIEEAFGYEGMGILVVSGVPGLNPKRDDLLPLAFKFANLPDEVKEKCTLAEAYYSLGWSHGKENLQGKPDYSKGSYYNNPETNDLADGDEQLIAKYPSFYHPNIW 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812XMA3_SYMMI7.870e-4760.66Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S4BCQ1_CHRCT8.160e-4457.38Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2G9H5_9STRA1.190e-4358.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4EZ27_CHRCT8.400e-4357.38Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A2P6N312_9EUKA1.540e-4257.48DIOX_N domain-containing protein n=1 Tax=Planoprot... [more]
A0A7S2SF68_9STRA4.510e-4256.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2N0B3_9EUKA2.310e-4155.83Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
L8HGG8_ACACA1.500e-3955.74DIOX_N domain-containing protein n=1 Tax=Acanthamo... [more]
A0A8J6C695_DIALT3.090e-3856.91Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A662Y240_9STRA4.240e-3751.20DIOX_N domain-containing protein n=1 Tax=Nothophyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16055contigP-wetherbeei_contig16055:232..936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5762.XP_002674055.1
PFAMs2OG-FeII_Oxy,DIOX_N
Model size402
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.21e-36
EggNOG OGs28J4J@1|root,2QRGK@2759|Eukaryota
Cds size402
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186075.5767663-CDS-P-wetherbeei_contig16055:231..2951683186075.5767663-CDS-P-wetherbeei_contig16055:231..295Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16055 232..295 -
1683186075.587803-CDS-P-wetherbeei_contig16055:427..5741683186075.587803-CDS-P-wetherbeei_contig16055:427..574Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16055 428..574 -
1683186075.5985098-CDS-P-wetherbeei_contig16055:745..9361683186075.5985098-CDS-P-wetherbeei_contig16055:745..936Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16055 746..936 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16055.1.1prot_P-wetherbeei_contig16055.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16055 232..936 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16055.1.1

>prot_P-wetherbeei_contig16055.1.1 ID=prot_P-wetherbeei_contig16055.1.1|Name=mRNA_P-wetherbeei_contig16055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
MLSSFVLSTATDIVTLAYDDLVKGFDLSDDIARAFGSDALGILIVAGVPT
LKEMRRRLLPLSHRLANLDPEVRRRYEHAPSTFSFGWSHGKESLEGRPDL
SKGSFYANPQYDRPVDDEEVIAAYPTFAHPNMW*
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mRNA from alignment at P-wetherbeei_contig16055:232..936-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16055.1.1 ID=mRNA_P-wetherbeei_contig16055.1.1|Name=mRNA_P-wetherbeei_contig16055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig16055:232..936- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGTCCTCATTCGTACTTAGCACAGCCACCGATATCGTCACCCTGGC GTACGACGACCTCGTGAAGGGGTTCGATCTCAGCGACGACATCGCTAGGG CCTTCGGGTCCGATGCACTCGGCATCTTGATCGTTGCGGGGGTTCCAACG CTGAAGGAGATGCGCAGAAGGCTTCTGCCGCTCTCTCACAGGTCTGTAAA ATGTGAAACAAAGGAGCTGCGAAAGTTTCTTCCCGACTCTTCCTAATATA AGACACCTCTCTTTCTTCCATTTGTGTCATGTCCCGATTCTTCACACGCC CTTTTCTTTTCTTTTCCAACGCCTGGCGTTCCCTCGCACTCCCCTTTCGT TCCAATTTGCAGGCTGGCAAACCTCGACCCGGAGGTGCGACGGCGTTATG AGCATGCGCCCTCGACCTTTAGTTTTGGATGGAGCCACGGCAAGGAGAGC CTTGAAGGGCGGCCGGACCTCTCGAAAGGCAGCTTTTACGCAAACCCCCA GTACGATAGGTGAGCAAGCACGCCGTCATTGTTCTTCTTAGGGTCTCCTC ATTCCTTCGATTGCCTTTCATTTAAAAACCAATGCCTTCCCTTTTCCGTT TTACGTTATTCTCAAATTTGAATCGGCGAATCTTGCCGCAGGCCCGTCGA CGATGAGGAGGTGATAGCAGCGTACCCGACGTTCGCACATCCCAACATGT GGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16055:232..936-

>mRNA_P-wetherbeei_contig16055.1.1 ID=mRNA_P-wetherbeei_contig16055.1.1|Name=mRNA_P-wetherbeei_contig16055.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig16055:232..936- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGTCCTCATTCGTACTTAGCACAGCCACCGATATCGTCACCCTGGC
GTACGACGACCTCGTGAAGGGGTTCGATCTCAGCGACGACATCGCTAGGG
CCTTCGGGTCCGATGCACTCGGCATCTTGATCGTTGCGGGGGTTCCAACG
CTGAAGGAGATGCGCAGAAGGCTTCTGCCGCTCTCTCACAGGCTGGCAAA
CCTCGACCCGGAGGTGCGACGGCGTTATGAGCATGCGCCCTCGACCTTTA
GTTTTGGATGGAGCCACGGCAAGGAGAGCCTTGAAGGGCGGCCGGACCTC
TCGAAAGGCAGCTTTTACGCAAACCCCCAGTACGATAGGCCCGTCGACGA
TGAGGAGGTGATAGCAGCGTACCCGACGTTCGCACATCCCAACATGTGGT
GA
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