prot_P-wetherbeei_contig16008.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16008.2.1
Unique Nameprot_P-wetherbeei_contig16008.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length99
Homology
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BLAST of mRNA_P-wetherbeei_contig16008.2.1 vs. uniprot
Match: UPI00040EBB1C (helix-turn-helix domain-containing protein n=1 Tax=Dyadobacter alkalitolerans TaxID=492736 RepID=UPI00040EBB1C)

HSP 1 Score: 60.1 bits (144), Expect = 9.290e-10
Identity = 26/77 (33.77%), Postives = 51/77 (66.23%), Query Frame = 0 
Query:   13 VANKIELLSKALRDLTIRDIFAEVLDSKEASRYLKISWRYLQVLKEKKEIPYSQHGTIVRYRKADLDRGLDKHRVSG 89
            +  ++  L+K +      DI+ E+LD+KEA+RYLK+  R ++ L+++K + + Q G ++RY+++DL + + +H V G
Sbjct:   15 ITQELSRLTKFIMSQQKEDIYNEILDAKEAARYLKVCTRQVENLRKQKRLSFIQDGKMIRYKRSDLQKYIAEHYVKG 91
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16008.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00040EBB1C9.290e-1033.77helix-turn-helix domain-containing protein n=1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16008contigP-wetherbeei_contig16008:1073..1369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16008.2.1mRNA_P-wetherbeei_contig16008.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16008 1073..1369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16008.2.1 ID=prot_P-wetherbeei_contig16008.2.1|Name=mRNA_P-wetherbeei_contig16008.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
MQMTVQLPEVSEVANKIELLSKALRDLTIRDIFAEVLDSKEASRYLKISW
RYLQVLKEKKEIPYSQHGTIVRYRKADLDRGLDKHRVSGGTTNLGNGS*
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