mRNA_P-wetherbeei_contig160.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig160.4.1
Unique NamemRNA_P-wetherbeei_contig160.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: D8LBP8_ECTSI (Nudix (Nucleoside diphosphate linked moiety X)-type motif 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP8_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 7.120e-94
Identity = 148/265 (55.85%), Postives = 187/265 (70.57%), Query Frame = 2
Query:  173 STGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSS----DITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPAAVELIESEHESIVPGRPPFKLYHR 955
            +T +  G+P PL + + KFNSAT+D+ ++QVEDT DFALKL+AT+  LR  GKAALWLKVP DF H+I +AS YG +LHHT P  + M +WL E+VP+KVP + THHVGVAGCV+N  DEVLLV++        WKFPGGLA+ GE +GEAA REV EETG+  EF+SVL++RHQH+MQFGNSDL+F+CR+         DI  C HEIA+A W+P+   +  T  + ML  VA ML  P   EL  S HES +P R P+ LYHR
Sbjct:   72 TTISNVGLPVPLPFEQSKFNSATVDIAKIQVEDTADFALKLFATVDKLRKDGKAALWLKVPTDFCHFISIASHYGFQLHHTQPKYLMMYLWLPEDVPDKVPPYGTHHVGVAGCVMNSQDEVLLVKDKHK--GAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPEDTGALDINKCNHEIADACWMPLDQFKKQTRHS-MLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYHR 333          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A836C878_9STRA (Nucleoside diphosphate linked moiety X-type motif 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C878_9STRA)

HSP 1 Score: 273 bits (699), Expect = 3.060e-83
Identity = 138/267 (51.69%), Postives = 181/267 (67.79%), Query Frame = 2
Query:  188 KGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVAS-FYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSD----------ITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS-PAAVELIESEHESIVPGRPPFKLYH 952
            +G+P+   Y+EG++NSA+I+  +++ +DT DFA KL AT+ HL+   K+A+WLKVP+D+AHY+PVA+   G R HH  PD + MV WL + VP+KVP FATHHVGVAGCV++    VL+V+E    P   WKFPGGLAE GEDLG AAAREV EETG+ + F  +L  R QH MQFGNSDL+F+CRM   + +          +  CAHEIAEARW+P+     A   +PM+G VA+ML   P   EL E   ESI   RPP+K+Y+
Sbjct:   59 EGLPDLFPYKEGQYNSASINAGKVRAQDTADFAAKLSATVAHLQREEKSAVWLKVPMDYAHYLPVAARAAGFRPHHALPDAVLMVRWLLDGVPDKVPPFATHHVGVAGCVLDARGRVLVVKERH--PRALWKFPGGLAEAGEDLGAAAAREVEEETGVRSAFAGLLAFRQQHAMQFGNSDLYFICRMTRRTGEXXXXXXXXQELRPCAHEIAEARWMPLEEF-AAQNTHPMMGVVAKMLMEGPQNHELKEETQESIFGSRPPYKMYY 322          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A4D9D5W2_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5W2_9STRA)

HSP 1 Score: 229 bits (583), Expect = 9.990e-67
Identity = 112/271 (41.33%), Postives = 164/271 (60.52%), Query Frame = 2
Query:  167 GFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS------PAAVELIESEHESIVPGRPPFKLYHRPL 961
            G   G +  + EPL      FN+  +D + ++V DT+DF  +L  T+Q LR  G++++W++V     H + V   +G + HH  P+++ M +WLQ    NKVP +ATH VGVAG   N   EVLLV+E     +G WK PGG   PGE+ G AA REV EETG+ + F+ +L +RHQH+  FG  D++ V R++AL+ ++  C+ EI +ARWVP+   +   A +P+L  VA +         P   +++E EH SI+PGRPP+KLYH PL
Sbjct:   15 GGQDGNKTFLGEPLEVTPMPFNAVMLDTDNMRVTDTSDFTTRLLVTVQQLRREGRSSMWVRVHALNGHLLGVLGTFGFKCHHCEPESVIMNLWLQPGKENKVPPYATHLVGVAGFCQNKKGEVLLVKEGSKNLSG-WKLPGGYINPGEEFGAAAVREVEEETGVRSSFEGLLALRHQHQQSFGVDDIYVVTRLQALTDELRLCSSEIQDARWVPLKQFQD-EASHPILRTVAELTRGWGQGEGPVRGDIVEREHPSILPGRPPYKLYHAPL 283          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: K8Z7W9_NANGC (Nucleoside diphosphate-linked moiety x motif 6 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z7W9_NANGC)

HSP 1 Score: 227 bits (579), Expect = 6.500e-65
Identity = 120/292 (41.10%), Postives = 173/292 (59.25%), Query Frame = 2
Query:  122 STGTRLLQTSHPCRRGFST--GAEKG----MPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLAS------PAAVELIESEHESIVPGRPPFKLYHRPL 961
            +T TR +    P RR FS   G + G    + EPL      FN+  +D + ++V DT+DF  +L  T+Q LR  G++++W++V     H + V   +G + HH  P+++ M +WLQ    NKVP +ATH VGVAG   N   EVLLV+E     +G WK PGG   PGE+ G AA REV EETG+ + F+ +L +RHQH+  FG  D++ V R++AL+ ++  C+ EI +ARWVP+   +   A +P+L  VA +         P    ++E EH SI+PGRPP+KLYH PL
Sbjct:   91 ATITRYMAGMQP-RRAFSGQGGGQDGNKTFLGEPLEVTPMPFNAVMLDTDNMRVTDTSDFTTRLLVTVQQLRREGRSSMWVRVHALNGHLLGVLGTFGFKCHHCEPESVIMNLWLQPGKENKVPPYATHLVGVAGFCQNKKGEVLLVKEGSKNLSG-WKLPGGYINPGEEFGAAAVREVEEETGVRSSFEGLLALRHQHQQSFGVDDIYVVTRLQALTDELRLCSSEIQDARWVPLKQFQD-EASHPILRTVAELTRGWGEGEGPVRGVIVEREHPSILPGRPPYKLYHAPL 379          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A7S2MDL7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDL7_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.510e-58
Identity = 104/235 (44.26%), Postives = 145/235 (61.70%), Query Frame = 2
Query:  269 DTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADE-------VLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPAAVELIESEHESIVPGRPPFKLYH 952
            DT+DF + L ++++     GK A WL VPLDFAHYI VA+  G R HH   DT  MV+W++ N P+++P FATH VGV G VV    +       VL++REA      ++K PGGL +  ED G+AA REVREETG+ AEF  +LT+RHQH MQFG SD++ +  +RA S D+    +E+ +ARW+ ++  R  +    +   +        AV L E E +S+VPGR P+KLY+
Sbjct:    1 DTSDFGMSLVSSLKAFNSAGKLATWLVVPLDFAHYISVAALSGFRFHHAEGDTATMVLWMRPNEPSRIPPFATHQVGVGGLVVRGGPDDNPEDPHVLVIREAGRNYT-NFKLPGGLCDVAEDFGDAAVREVREETGVEAEFSRILTMRHQHGMQFGRSDIYCIALLRATSVDVAIDTNELEDARWMKLSEFRENSPHEMVEHAIQAATGEGGAVGLQEKELKSVVPGRVPYKLYY 234          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A835YXX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX9_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.190e-55
Identity = 121/298 (40.60%), Postives = 161/298 (54.03%), Query Frame = 2
Query:  128 GTRLLQTSHPCRRGFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREA------RTLPAGSWKFPGGLAEPGEDLGEAAAREV-----REETGITAEFQSVLTIRHQHKMQFGNSD-LFFVCRMRALSSDITACAHEIAE-------ARWVPMAHLRG-ATADNPMLGKVARMLASPAA-VELIESEHESIVPGRPPFKL-YHR 955
            G RL+ +S P           GMP+P  Y EG++NSAT++  ++  EDT DFA  L+ATI HLR   K ALWL+VP+DFAHY+P+A  YG + HHT  + + MV+WL+ +V N++P FATHHV V+  V N    VL+VR              S+ FPGGLAE GEDL +AAAR V     R   G    F+ VL +R  H    G +  L F+C + A                     A+WVP++ LR    A + +   VA++L   A   E+    H S VPGRPP+ L YHR
Sbjct:   52 GARLMSSSIPTM--------TGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHR 341          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: A0A6P5M2G6_PHACI (Nucleoside diphosphate-linked moiety X motif 6 n=3 Tax=Phascolarctos cinereus TaxID=38626 RepID=A0A6P5M2G6_PHACI)

HSP 1 Score: 187 bits (474), Expect = 2.130e-50
Identity = 109/278 (39.21%), Postives = 154/278 (55.40%), Query Frame = 2
Query:  164 RGFSTGAEKGMPEPLHYREGKFNSATIDVNELQVEDTTD---FALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASP-----AAVELIESEHESIVPGRPPFKLYHRPLAD 967
            R  S+    G P  L     +F   T+ + +LQ  D+ D   F   L A+IQ  R  G+ A+WL VP+  + +I  A+  GLR HH   D   M +WL E  P+++P +ATH VGVAG V ++    +LV + R     +WKFPGGL+EPGED+G+ A REV EETGI +EF+S+L+IR QH     FG SD++ +CR+R LS  I+ C HE  +  W+ +  L       P+  KVA +L          V++   E  S+  G   +KLYHR L +
Sbjct:   43 RALSSSPSPG-PGGLRGEVDRFGGVTVRLGQLQPADSVDPATFRTWLQASIQQWRAEGRIAVWLHVPIFHSQFISPAASLGLRFHHAEADASLMTLWLGEG-PSRLPGYATHQVGVAGAVFDEDTGKVLVVQDRNKMKNAWKFPGGLSEPGEDIGDTAIREVLEETGIKSEFKSLLSIRQQHGAPNAFGKSDMYIICRLRPLSFHISFCPHECLKCEWMNLTDLAQTDDTTPITHKVANLLLYGHREGFEKVDIAMQELPSVYVGLF-YKLYHRELPE 317          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI00142569A1 (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142569A1)

HSP 1 Score: 182 bits (463), Expect = 1.820e-49
Identity = 86/202 (42.57%), Postives = 131/202 (64.85%), Query Frame = 2
Query:  200 EPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAEARWV 805
            E  + ++ ++N   I++ E + +    F  +L  +++     G   +WLK+ ++ A +I VA+ +G   HH   D + M+ WL  + PN++P + TH+VGVAG VVN+ ++VL+V+E R     +WK PGG+A+PGEDLG  A REV EETGI AEF S+L  R QH  +FG SDL+FVC M+AL+S+I +C HEI++  W+
Sbjct:    2 ETFNGKKDQYNGIIINIKEHKCDSEKIFNDRLKRSLEEWNTSGIRGVWLKIAIECAAFIAVAAKHGFVFHHAQTDYVMMIKWLPTDEPNQLPGYTTHYVGVAGFVVNENNQVLVVKE-RFYKKANWKLPGGMADPGEDLGVTAKREVFEETGIEAEFISLLAFRQQHGFRFGQSDLYFVCEMKALNSEIASCQHEISDCMWM 202          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI000F555542 (nucleoside diphosphate-linked moiety X motif 6-like n=2 Tax=Pocilloporidae TaxID=46729 RepID=UPI000F555542)

HSP 1 Score: 182 bits (462), Expect = 5.300e-49
Identity = 106/266 (39.85%), Postives = 157/266 (59.02%), Query Frame = 2
Query:  206 LHYREGKFNSATIDVNELQVEDTT-DFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVN-DADEVLLVREARTLPAGS------WKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLRGATADNPMLGKVARMLASPA------AVELIESEHESIVPGRPPFKLYHR 955
            LH+ E  FN  T+++++L  + +  +F++KL  +IQ  R   K ++W+KVP+  ++ IPVA  +G   HH   D   ++ WL +   NKVP +ATH VGV+G V+N + +EVL+V++   L  G       WKFPGGL++ GE + E A REV EETGI AEF+S+L  R QHKM+  F  SD++ VCRM  LS  I+ C  EIA+ +W+ ++ L   T   P L K+A  LA         +V+++ +   S V     F L+HR
Sbjct:   31 LHWNEAYFNGVTVNLDQLGEQCSPGEFSVKLTRSIQQWRKERKKSVWMKVPIVQSYLIPVAFEHGFSYHHAVGDHAMLLKWLPKKEHNKVPPYATHQVGVSGLVLNREKNEVLVVQDKNLLKIGRRLKRPVWKFPGGLSDEGESIEETAVREVWEETGIRAEFKSILLFRQQHKMKNAFDKSDVYVVCRMEPLSFGISHCEDEIAQCQWMELSTLLTHTDTTP-LTKLAARLAKHGLKNGFESVDIVANSMRSWVNPSQTFSLFHR 295          
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Match: UPI001458116F (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458116F)

HSP 1 Score: 181 bits (460), Expect = 8.420e-49
Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 2
Query:  224 KFNSATIDVNELQVE-DTTDFALKLYATIQHLRGRGKAALWLKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHHVGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVREETGITAEFQSVLTIRHQHKMQ--FGNSDLFFVCRMRALSSDITACAHEIAEARWVPMAHLR-GATADNPMLGKVARMLASPAA-----VELIESEHESIVPGRPPFKLYHRPL 961
            +FN  T+DV ++ V     +F   L+ ++Q  R +   A WLK+P+ +  +IP+A+  G + HH   +   + +W++EN  +K P FATH VGVAG V  +  + +LV + R      WKF GGL++ GED+G+ A REV EETG+  EFQSV+++R QH     FG SD FFVCRMR LS DI  C  EI+  +W+ +  L  G+ +  P+  ++  +           V+L   + ESI  G   +KLYHRP 
Sbjct:   37 RFNGITVDVKQVSVSLPDEEFHSLLHNSLQVWRSKEINAAWLKIPIQYGRFIPIAAKLGFQFHHAEENNCLLKLWMKENGEDKTPRFATHQVGVAGFVFREDTQSVLVVKDRKSKFSYWKFAGGLSDLGEDIGDTAVREVFEETGVKTEFQSVMSVRQQHNQPGAFGRSDFFFVCRMRPLSYDINPCNEEISACQWMNIQELHEGSKSVAPITRRILDLALYGLKEGFHNVDLYAEDMESIYRGLR-YKLYHRPF 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig160.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBP8_ECTSI7.120e-9455.85Nudix (Nucleoside diphosphate linked moiety X)-typ... [more]
A0A836C878_9STRA3.060e-8351.69Nucleoside diphosphate linked moiety X-type motif ... [more]
A0A4D9D5W2_9STRA9.990e-6741.33Nudix hydrolase domain-containing protein n=1 Tax=... [more]
K8Z7W9_NANGC6.500e-6541.10Nucleoside diphosphate-linked moiety x motif 6 n=2... [more]
A0A7S2MDL7_9STRA1.510e-5844.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YXX9_9STRA2.190e-5540.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6P5M2G6_PHACI2.130e-5039.21Nucleoside diphosphate-linked moiety X motif 6 n=3... [more]
UPI00142569A11.820e-4942.57nucleoside diphosphate-linked moiety X motif 6-lik... [more]
UPI000F5555425.300e-4939.85nucleoside diphosphate-linked moiety X motif 6-lik... [more]
UPI001458116F8.420e-4938.82nucleoside diphosphate-linked moiety X motif 6-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig160contigP-wetherbeei_contig160:5095..9930 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBP8
Preferred nameNUDT6
PFAMsNUDIX
Model size1870
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0008083,GO:0008150,GO:0009966,GO:0010469,GO:0010646,GO:0023051,GO:0030545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0065007,GO:0065009,GO:0098772
Exons6
Evalue5.64e-99
EggNOG OGsKOG0648@1|root,KOG0648@2759|Eukaryota
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-27_003180.1
Description8-hydroxy-dADP phosphatase activity
Cds size780
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig160.4.1prot_P-wetherbeei_contig160.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig160 7760..9737 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186074.1446395-UTR-P-wetherbeei_contig160:5094..51811683186074.1446395-UTR-P-wetherbeei_contig160:5094..5181Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig160 5095..5181 -
1683186074.1565073-UTR-P-wetherbeei_contig160:6949..77591683186074.1565073-UTR-P-wetherbeei_contig160:6949..7759Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig160 6950..7759 -
1683186074.2097123-UTR-P-wetherbeei_contig160:9737..99301683186074.2097123-UTR-P-wetherbeei_contig160:9737..9930Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig160 9738..9930 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186074.170296-CDS-P-wetherbeei_contig160:7759..79341683186074.170296-CDS-P-wetherbeei_contig160:7759..7934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig160 7760..7934 -
1683186074.178298-CDS-P-wetherbeei_contig160:8298..83871683186074.178298-CDS-P-wetherbeei_contig160:8298..8387Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig160 8299..8387 -
1683186074.1863317-CDS-P-wetherbeei_contig160:8582..88221683186074.1863317-CDS-P-wetherbeei_contig160:8582..8822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig160 8583..8822 -
1683186074.194072-CDS-P-wetherbeei_contig160:9221..94161683186074.194072-CDS-P-wetherbeei_contig160:9221..9416Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig160 9222..9416 -
1683186074.2016811-CDS-P-wetherbeei_contig160:9656..97371683186074.2016811-CDS-P-wetherbeei_contig160:9656..9737Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig160 9657..9737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig160.4.1

>prot_P-wetherbeei_contig160.4.1 ID=prot_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
MPEPLHYREGKFNSATIDVNELQVEDTTDFALKLYATIQHLRGRGKAALW
LKVPLDFAHYIPVASFYGLRLHHTTPDTIFMVMWLQENVPNKVPHFATHH
VGVAGCVVNDADEVLLVREARTLPAGSWKFPGGLAEPGEDLGEAAAREVR
EETGITAEFQSVLTIRHQHKMQFGNSDLFFVCRMRALSSDITACAHEIAE
ARWVPMAHLRGATADNPMLGKVARMLASPAAVELIESEHESIVPGRPPFK
LYHRPLADS*
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mRNA from alignment at P-wetherbeei_contig160:5095..9930-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig160.4.1 ID=mRNA_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4836bp|location=Sequence derived from alignment at P-wetherbeei_contig160:5095..9930- (Phaeothamnion wetherbeei SAG_119_79)
TTTCACGGCGGCAGGGCCGCGTCGATCGCTCGGCAACGCACCAGGAAATG TCCTTCCTCGTTGCATCACATCAACATGCGAGCTAAACACACCGCAGCTT CGCGTACTGCGCCGCCAATTGTCGACAGGGACGAGATTGCTTCAGACCTC GCATCCGTGCCGCCGGGGCTTTTCCACGGGCGCCGAAAAAGGGATGCCGG AGCCACTTCACTATCGTGAGGGCAAGTTTAACAGCGCGACCATCGATGTC AACGAGCTCCAAGTCGAGGACACGGTTAGTGTAGACCTGGCAGTACTTCT GATGATCGCTGGTTAGGCGGCGTATTCTTTCCAGTGACGTATCCTTTATT CCTTCGGTCGGTTCCGAAAAGGAAGAAGAGACGTCATTTGTTTTACGAAC AAGAAGTTGGCACGTGCCGTCCAAAAGCCGATCTGCTTTTGCCTGCGACC AACACAAATGATGAACTTATGCCTGTTGTGCGCGCCTCTGTTTCACTCCT CTCTGTCCCGCCAGACGGACTTCGCATTGAAGCTTTACGCGACCATCCAG CACCTGCGAGGCCGCGGCAAGGCAGCCCTGTGGCTGAAAGTACCGCTGGA CTTCGCCCATTACATCCCGGTCGCCAGCTTTTACGGCCTCCGCCTCCACC ACACGACGCCTGACACCATCTTCATGGTGATGTGGCTGCAGGAGAACGTC CCCAACAAGGTGTGTAGTTGGTTTTGCGGGGCTACCGCCCAGAAAACTGG GAAAGCGGGGGAAGCTGGAAGCGGCGACGAGAGCTCTTTTGCGGGAAGGC CAATCTCGTTGTGTTCCTGGCTCGCTTAGGCTTCTAGGTCGGCCGCAGAT CCTGCGGATCTATGAGTCCGAAGGCTCTGGTCTCTTGTCAGAGCTTGAGG AAGGTACTGCCGTTGCACACATCTGGGTCCGCATGGTTTTTTGCTGAGGC TTCCTGTTTCTGTGCCATGGGATCGAAGTGCGATACTTCCGCATTCCATG TTGCAGCTTGCGCTTCTCGCAGGGGCTTGATCGGCGACCATTATTTTCCT TCTTTCAGATTGCAGCCGACCCAAATTCTCACCCTTCTCTTTCTTCCCTG CAAAACAGGTGCCGCACTTCGCGACGCACCACGTGGGGGTCGCCGGCTGC GTCGTGAACGACGCCGACGAGGTGCTGCTGGTGCGCGAGGCAAGAACGCT CCCGGCGGGTTCCTGGAAGTTCCCGGGAGGGCTCGCGGAGCCGGGGGAGG ATCTGGGGGAGGCGGCTGCGCGTGAGGTGCGGGAGGAAACGGGTATAACG GCCGAGTTCCAGAGCGTGCTGACCATCCGGCACCAGCATAAGATGCAGGT GAGGAGAGGAGAGAGGGCCTTCCAACCGCTGTGACTGTTACCATTTTGGC CGTTCATCTCCGGTCGGGCGATCGCTATGATCCTGCATGTAACCACCGCA GTCTTACCGTCCAATCCGTGTGCCCGTCCTTCACTGCGCCCTTTTCCTTT TCTCCCTCAATCGATTCTGCGTTGCCGCCTGCTCCGCGCTCAGTTCGGGA ACAGCGATCTGTTCTTCGTCTGCCGCATGCGGGCGCTCAGCAGCGACATC ACCGCCTGTGCACACGAAATCGCCGAGGCGCGGTGAGTCCACTTTCCCCT CATCGTGGTGGTGGTTCGAAAACATGTTATTTCTGGGCGAAATTGCCCTT GGAGGCGTTCAGTTGTCCTCCTTAACCTTCTTTCATTCATACGGTCGGTT ACGCGACGTTGCTTTCCCTCCGTAGTAGATTTGTCTCTTTGTTTTATCCG TCCCGTTGGCCCTTTTCTGCTCCGCCATGACCATGTCCACTCCTCTTTTC ATTTTCCACCCTTTACTTCTCCTCGCGCTGCTTACACACGCACGGATCCC TTCTCTCTGTCGTGGGGGTCCCAAACACCTCTCTCGTTCTTTCATATTTA TCTCTGCCCTGCTTCACTTTTCCTTTCGTCGTGTGACGGACGATAGGTGG GTGCCGATGGCGCACCTGCGGGGCGCGACGGCCGACAACCCGATGCTCGG CAAGGTGGCGCGAATGCTTGCATCGCCTGCCGCTGTCGAGCTCATCGAAT CGGAGCACGAGAGCATTGTGCCCGGCCGCCCGCCCTTCAAGCTCTACCAC CGCCCGCTGGCGGACAGCTAGCATCGCCGGAGCTGGGCGGTTTTTCCGGC TTCTCGCCCTTCAAACTATTACCAGTCGCAATGGAAAGCTAGTGTAGCAG GATCGGGCGGTCCTTTTCATCTGCCCTTCACTCAAGCTCTACTGCCGGCC GCTGGCAGAAAGCTAGTGTCGCAACAATTGGGTGGGATGGTCCGCTCCAG CTGCTCGGAAAAGAGCTGGTCGATAAGACCAGGCGGAATCCGGATGCACC GGGTCGCTCGAATACAATTCTGTATTTATCATGTAAACCTGTCTTACGAG GAGATCCTGCTACTGAATACTTCTAGGCTACTATAGTCGTTTCCACAAAA GCTTTTTGGCGCTCCTGTCCTGTGGCTCAGGTGTGAGGCCACCAATAGAA GTAGTAAGGGATACTGAATGAATGGCTGCCTCCACCGCAAATCCAGTGTG AAACGGCGGCAACGGCGCCGTTACAGTATCGGGCGGGGCGGATGGCCGTC AGCATATACCGTATTGGAACATGGAACCTCGCACTGTCTCTCGTTGCTGC CATGGGGAAGACATAGGGACAGACTTCAATCTCTTTATTCCAAACGTCTT GCAGATACGGCGAAAGTTGTAGCTCTTCTCACTACGAACCGTCCGAAGTA TGCGAAAACGAAGCCCTCATCCCCATACTCGACTACATACTCCAAGAAAC TGTGGCTTTTTTCTTCTTCTCTCTTCTTGCGACCGCAGCCCAGAGCGAAT CAGTCGACGAGTTGTGTTTGGCGGCCGCCCGCCAACGCCGCTCGGCGGCT GGCCGCGGATGCAGTGCGGTAGCCGTGGAGCTGCAAGAGCGAAAGGGATG GCGACAGGAAAACTGGGGGGATGACGTCAGTCGACTACTAAGGAAAATCT AGGGGAAAACGCATCACTTGTAGATAAGGTGGGTGAAGCATTCTGACATG CAGTCACAGTTCCAGATAGAGCTTGTATTTGGCAGGCTCACTTAATTCGT TTGTGAAAGGCAAAATACAGTGTATTACGTCTTGACTCCTCGAGCGCCAG CGGACGTGCGAATGAAGAATGGTTCCGCCGGACTCCTGGTTAACCCAGGC CTTGCCCTTAATCAGAAACCCATGTCGGTATCACAAGAAACACTACAACA GTTCCGCAGAGCGAACTCAATATCCCCCTCCTTTGCTCTCACATATACAA GGATCGGGTACATCGGGTCGAAGCCGGCCGTGCCGCGGGTCGCGATCGCC TCTGCGAACGCCTTCTCAGCGGCGCTCCATTTTGCTTCATGGAATTCGGT ACATGCAAGAAGCTTCAATGGCAGGCTGGATCGGTCCCATCCCGCAAAGA GGTGTGCAGCAACCGCTTTCGCTCCCGCGAGGTGGGAGACGCAGAGTCGT CACCGCGCCGTCGGCCGGCGGTCGGCTTTAACCAGGCGCACGTCGAGGGC TATCATCGCCTGCTGCCCAGAGAGACGCCGCCTGTTGGTTGGCGTAACAA GCAGCCGCATAGAGAGCTCCCAGAGCAACCAATTCCCGCGGCAGGTTGGA AACTCCTCTGTATCGAAGGAGCGGGCGCACCGCAAAACAAAACGCGCATG CAAAAGCCTGGAAGGCAGACGGAATAAGGAAGAACACATGAATCGCTCGC TGCCGCCGCAGTCCTCGATGCACGCACAGGCCGGTGGCAGCGGTCGTCCC CCAGGCGACTCTCGCCGGCGGCGAACCCCACGAGAACGCCTTCGCGTCGC ACCGCCGGCCGTGGCTCCCGCGTGGGACGACGAAGACGAACCGGTCGACA GCACGGCGGTACAGTTCTTCCTCACCGTCCGCCGCCATCCAAAAGTTGGC TACTAAGACCAGCGCCCCCTCCACGCCTTGGGTGTCGCCGCCGTGGATTT TCTCTCGAAGCGGGTGCGCGACGCCTCGGGAAACGAGCACGGCAGCGCGG GATGGTCTGAAGGGACGAGTTCGGCAGGAGGCGGTAGCTCAGCGGGAACG AATCGGGCGGCAACGAACAGAATGCACCAAGATGCGTCGCCGATTACATG ATTTCAGTGATTTGGCCGCTGGGACGGACAGACAGTTGCGGCTGTTTAGA CATCGTCCCGAACGGGAACTGCAAGCATTTGGTGGAGGTCGGGGAGAAAT GTAGGCGAGCCATGAAGCGAAAGAGGAAGAGCAGGCCGGGACTTGCTAGC GGCCTGCCATAATCTCTTGCGTGGCATGATGACATTGCACGACGCACAAT CTGGATACATGGAGATAACCAACAGGAGGGCTTTGCAGAAGCGTCCATGC CTTCCAGGAATGGAACCTCTACAGAGACTTCACGACCCTGCTGACTTTAT TTGTGCCCTTGCACTTCCGCCTGCAGAACGTACTGCGGTATTCGCGAGTC CAGTGGAGGGCCGGTGGAAACTTTTGAATGGAGAGGAAATGCTCATCCTT CCGGGAGACTACGTCCCGAAAGCTTGAAATGCAAGGACGGTGGTGCAAAG GCAAGGTCGAAGGTAAGATAATGAATGACACGGCGCGAGCAGCACATTTT TATGAGGTCTGGTAATGAGGAACGAAGGAATTCTGGCTTCTCTCTCACCG AATTTGGCGACATTCCGCACAGCGCAGTGCAGAAAGCACGGCGCTGCATG TACCCCAAGGGAAATGGCGCTGTCCCTCTTGTGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig160:5095..9930-

>mRNA_P-wetherbeei_contig160.4.1 ID=mRNA_P-wetherbeei_contig160.4.1|Name=mRNA_P-wetherbeei_contig160.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig160:5095..9930- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGAGCCACTTCACTATCGTGAGGGCAAGTTTAACAGCGCGACCAT
CGATGTCAACGAGCTCCAAGTCGAGGACACGACGGACTTCGCATTGAAGC
TTTACGCGACCATCCAGCACCTGCGAGGCCGCGGCAAGGCAGCCCTGTGG
CTGAAAGTACCGCTGGACTTCGCCCATTACATCCCGGTCGCCAGCTTTTA
CGGCCTCCGCCTCCACCACACGACGCCTGACACCATCTTCATGGTGATGT
GGCTGCAGGAGAACGTCCCCAACAAGGTGCCGCACTTCGCGACGCACCAC
GTGGGGGTCGCCGGCTGCGTCGTGAACGACGCCGACGAGGTGCTGCTGGT
GCGCGAGGCAAGAACGCTCCCGGCGGGTTCCTGGAAGTTCCCGGGAGGGC
TCGCGGAGCCGGGGGAGGATCTGGGGGAGGCGGCTGCGCGTGAGGTGCGG
GAGGAAACGGGTATAACGGCCGAGTTCCAGAGCGTGCTGACCATCCGGCA
CCAGCATAAGATGCAGTTCGGGAACAGCGATCTGTTCTTCGTCTGCCGCA
TGCGGGCGCTCAGCAGCGACATCACCGCCTGTGCACACGAAATCGCCGAG
GCGCGGTGGGTGCCGATGGCGCACCTGCGGGGCGCGACGGCCGACAACCC
GATGCTCGGCAAGGTGGCGCGAATGCTTGCATCGCCTGCCGCTGTCGAGC
TCATCGAATCGGAGCACGAGAGCATTGTGCCCGGCCGCCCGCCCTTCAAG
CTCTACCACCGCCCGCTGGCGGACAGCTAG
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