prot_P-wetherbeei_contig15997.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15997.1.1
Unique Nameprot_P-wetherbeei_contig15997.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length51
Homology
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: F1VYT1_9BURK (Secretion protein HlyD n=1 Tax=Oxalobacteraceae bacterium IMCC9480 TaxID=937450 RepID=F1VYT1_9BURK)

HSP 1 Score: 75.1 bits (183), Expect = 1.030e-16
Identity = 32/47 (68.09%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            M++GS+ A+VT+VD+VIDAASGTFGVRLEL NPG ++PAG++C V+F
Sbjct:   24 MMSGSYSAKVTVVDRVIDAASGTFGVRLELRNPGNKIPAGMRCNVKF 70          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: UPI001E5613D3 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Aquincola tertiaricarbonis TaxID=391953 RepID=UPI001E5613D3)

HSP 1 Score: 73.6 bits (179), Expect = 3.770e-16
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    2 VAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            ++G   A VT+VD+V+D+ASGTFGVRLELPNP G +PAG+KCRVRF
Sbjct:   21 LSGRHAALVTVVDRVVDSASGTFGVRLELPNPNGELPAGVKCRVRF 66          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A1Q7EGN2_9BACT (Efflux transporter periplasmic adaptor subunit n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7EGN2_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 4.130e-16
Identity = 34/46 (73.91%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    2 VAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            V+G + ARVT+VD+V+DAASGTFGVRLE+PNPG R+PAG+KC+VRF
Sbjct:  224 VSGLYAARVTVVDRVVDAASGTFGVRLEMPNPGYRLPAGLKCKVRF 269          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: UPI001CF8B20D (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Quatrionicoccus australiensis TaxID=138118 RepID=UPI001CF8B20D)

HSP 1 Score: 77.8 bits (190), Expect = 6.280e-16
Identity = 34/47 (72.34%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    1 MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            +++G ++ARV+ +DKVIDAASGTFGVRLELPN GGR+PAGIKC VR 
Sbjct:  228 LISGVYKARVSAIDKVIDAASGTFGVRLELPNRGGRIPAGIKCNVRI 274          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A848HBA3_9BURK (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Ramlibacter agri TaxID=2728837 RepID=A0A848HBA3_9BURK)

HSP 1 Score: 76.6 bits (187), Expect = 1.500e-15
Identity = 35/46 (76.09%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    2 VAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            VAG++R+ V++VD+VIDAASGTFGVRLELPN  GRVPAG++CRVRF
Sbjct:  221 VAGTYRSTVSVVDRVIDAASGTFGVRLELPNREGRVPAGMRCRVRF 266          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A519J5Y7_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A519J5Y7_9GAMM)

HSP 1 Score: 75.5 bits (184), Expect = 1.910e-15
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRFSA 49
            M++G+  A V +VD+VIDAASGTFGVRLELPNPG ++PAGI+C VRF++
Sbjct:  167 MMSGNHTATVKVVDRVIDAASGTFGVRLELPNPGNKIPAGIRCNVRFAS 215          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A845TPJ5_9BURK (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A845TPJ5_9BURK)

HSP 1 Score: 75.1 bits (183), Expect = 2.680e-15
Identity = 32/47 (68.09%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    1 MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            M++GS+ A+VT+VD+VIDAASGTFGVRLEL NPG ++PAG++C V+F
Sbjct:  167 MMSGSYSAKVTVVDRVIDAASGTFGVRLELRNPGNKIPAGMRCNVKF 213          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A4Q5P9A0_9BURK (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q5P9A0_9BURK)

HSP 1 Score: 74.7 bits (182), Expect = 3.770e-15
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            M+ GS  A V +VD+VIDAASGTFGVRLELPNPG ++PAGI+C VRF
Sbjct:  167 MMNGSHTATVKVVDRVIDAASGTFGVRLELPNPGNKIPAGIRCNVRF 213          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: UPI001F1A45CE (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Pelomonas sp. P7 TaxID=2906763 RepID=UPI001F1A45CE)

HSP 1 Score: 75.5 bits (184), Expect = 4.120e-15
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    4 GSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRF 47
            G + A VT+VD+V+DAASGTFGVRLELPNP G +PAGIKCR RF
Sbjct:  225 GRYTATVTIVDRVVDAASGTFGVRLELPNPKGEIPAGIKCRARF 268          
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Match: A0A1F7N731_9BACT (HlyD_D23 domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium RIFCSPHIGHO2_02_FULL_73_26 TaxID=1802102 RepID=A0A1F7N731_9BACT)

HSP 1 Score: 75.5 bits (184), Expect = 4.430e-15
Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    2 VAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRFSAK 50
            V GS+RARVT+VD+V+DAASGTF VRLEL NP  R+PAG+KC+VRF ++
Sbjct:  226 VGGSYRARVTVVDRVVDAASGTFAVRLELANPQYRLPAGLKCKVRFPSR 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15997.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F1VYT1_9BURK1.030e-1668.09Secretion protein HlyD n=1 Tax=Oxalobacteraceae ba... [more]
UPI001E5613D33.770e-1669.57efflux RND transporter periplasmic adaptor subunit... [more]
A0A1Q7EGN2_9BACT4.130e-1673.91Efflux transporter periplasmic adaptor subunit n=2... [more]
UPI001CF8B20D6.280e-1672.34efflux RND transporter periplasmic adaptor subunit... [more]
A0A848HBA3_9BURK1.500e-1576.09Efflux RND transporter periplasmic adaptor subunit... [more]
A0A519J5Y7_9GAMM1.910e-1567.35Efflux RND transporter periplasmic adaptor subunit... [more]
A0A845TPJ5_9BURK2.680e-1568.09Efflux RND transporter periplasmic adaptor subunit... [more]
A0A4Q5P9A0_9BURK3.770e-1572.34Efflux RND transporter periplasmic adaptor subunit... [more]
UPI001F1A45CE4.120e-1575.00efflux RND transporter periplasmic adaptor subunit... [more]
A0A1F7N731_9BACT4.430e-1569.39HlyD_D23 domain-containing protein n=1 Tax=Candida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.170coord: 3..50
e-value: 2.5E-7
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15997contigP-wetherbeei_contig15997:23..175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15997.1.1mRNA_P-wetherbeei_contig15997.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15997 2..175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15997.1.1 ID=prot_P-wetherbeei_contig15997.1.1|Name=mRNA_P-wetherbeei_contig15997.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=51bp
MVAGSFRARVTLVDKVIDAASGTFGVRLELPNPGGRVPAGIKCRVRFSAK
*
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