mRNA_P-wetherbeei_contig1598.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI001CC9E7EA (glycosyl hydrolase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CC9E7EA) HSP 1 Score: 191 bits (484), Expect = 3.500e-55 Identity = 114/252 (45.24%), Postives = 149/252 (59.13%), Query Frame = 1
Query: 1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPT---------QSARGMKFYPMIW-----AEKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRG+ Y +E + AL+ +S++YNWSP QSA G+ F PM+W A++ A P LLGFNEPNF Q+ +TPSRAAALWP + +A+ ++ SPAVNYCG +C+ + DP+ +LD FFA C CKVDY+A H Y C+V L R+ KY KP+ LTEF+C D+P + Q +YM AAV YLE P V YAWF+G++ E P INL G QLT LG+LY
Sbjct: 25 KRGLGYGYHSAEDMLALSRGMSWWYNWSPKPDSGAAGVYQSA-GVAFVPMVWGGTPNADQVAAAIPAG-AQYLLGFNEPNFRSQANMTPSRAAALWPILEEVARRKNLKLVSPAVNYCG-DCVSEGGVTYSDPVTYLDAFFAACTN-----CKVDYIAVHWYACDVGALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAIQKQYMTAAVNYLENEPAVFRYAWFSGRNNEIPHINLLGNSGQLTELGQLY 268
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A1I2ARD7_9DELT (Glycosyl hydrolase catalytic core n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ARD7_9DELT) HSP 1 Score: 186 bits (473), Expect = 1.880e-54 Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 1
Query: 1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQS-------ARGMKFYPMIWAEKDLAR-PPLQK-TDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKDPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRGIAY +++AALA VS++YNW+ A ++F PM+W L + PP+ + LL FNEPNFG Q+ LTP AAALWP V +A + G I SPA+NYCG +C + DP W D FFA C C+VD++A H Y C L KY +P+ LTEFSCLD ++ + Q +YM+ A+ YLE P V YAWF+G+ P+++L GE LT LG+ Y
Sbjct: 82 KRGIAYGYHSHADLAALAPGVSWWYNWAVPPDPDVGDYQALNVEFVPMLWGGGSLDQDPPIPEGARYLLAFNEPNFGAQADLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGDCNKTDPFEWFDEFFAACP-----GCRVDHLAVHWYACTRDALTWYIGEMKKYERPIWLTEFSCLDAEDKSVAVQKQYMQEALEYLEAEPSVARYAWFSGRWEATPTVDLLGESGALTELGQQY 315
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: Q098D0_STIAD (F5/8 type C domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) TaxID=378806 RepID=Q098D0_STIAD) HSP 1 Score: 189 bits (479), Expect = 2.460e-54 Identity = 111/256 (43.36%), Postives = 150/256 (58.59%), Query Frame = 1
Query: 1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQSAR--------GMKFYPMIW-----AEKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKS 699
KRGI+Y +++ AL+ +S++YNWSP A G+ F PM+W A++ A+ P LLGFNEPNF Q+ +TPSRAA+LWP + +A+ ++ SPAVNYCG +C+ + DP+ +LD FFA C CKVDYVA H Y C+V L+ + KY KP+ LTEF+C D P + Q +YM AV YLE P V Y+WF+G++ E P+INL G QLT LG+LY L S
Sbjct: 35 KRGISYGYHSAADMTALSAGISWWYNWSPQPEAGAASVAPSVGVSFVPMVWGGTPNADQLAAQIPAG-AQYLLGFNEPNFKSQANMTPSRAASLWPVLEDVARRKNLKLVSPAVNYCG-DCVSEGGTTFTDPVAYLDAFFAACTN-----CKVDYVAVHWYACDVSALSWYIGLFKKYNKPIWLTEFACGDRPHNEITLAVQKKYMTDAVNYLENEPAVFRYSWFSGRNSEIPNINLLGNSGQLTELGQLYVSLPS 283
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI001951F8FD (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001951F8FD) HSP 1 Score: 188 bits (478), Expect = 3.150e-54 Identity = 109/250 (43.60%), Postives = 145/250 (58.00%), Query Frame = 1
Query: 1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRG+ Y +E + AL+ +S++YNWSPT A G+ F PM+W LA LLGFNEPNF QS +TPS+AAA WP + +A+ ++ +PAVNYCG +C+ + DP+ +LD FFA C CKVDY+A H Y C++ L R+ KY KP+ LTEF+C D+P + Q +YM AVTYLE P V YAWF+G++ E P+INL G QLT LG+LY
Sbjct: 30 KRGLGYGYHSAEDMKALSKGMSWWYNWSPTPEAGAASVYTSVGVSFVPMVWGGTPNADQLAAAIPAGAQYLLGFNEPNFIYQSNMTPSQAAARWPVLEEVARRRNLKLVAPAVNYCG-DCVSEGGVTYSDPVTYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVTYLENEPAVFRYAWFSGRNNEIPNINLLGASGQLTELGQLY 273
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A085VZK6_9DELT (Putative secreted protein n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085VZK6_9DELT) HSP 1 Score: 185 bits (470), Expect = 4.330e-53 Identity = 109/259 (42.08%), Postives = 147/259 (56.76%), Query Frame = 1
Query: 1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSA--------RGMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKSCTTD 711
KRG+ Y ++ + AL+ +S++YNWSPT A G+ F PM+W LA T LLGFNEPNF Q+ +TPSRAA LWP + +A+ G ++ +PAVNYCG +C+ + DP+ +LD FFA C +C+VDY+A H Y C++ L + KY KP+ LTEF+C D P + Q +YM AV YLE P V YAWF+G++ E P+INL G QLT LG+LY L T
Sbjct: 25 KRGLGYGYHSAQDMQALSRGMSWWYNWSPTPEAGAAGVYQSAGVAFVPMVWGGTPNADQLAASIPAGTQYLLGFNEPNFRSQANMTPSRAAQLWPILEDVARRKGLKLVAPAVNYCG-DCVSEGGVTFSDPVTYLDAFFAACP-----SCQVDYIAVHWYACDLGALQWYIGLFKKYNKPIWLTEFACGDRPHDQITLALQKQYMTDAVNYLENEPAVFRYAWFSGRNNEIPNINLLGNSGQLTELGQLYVSLPFAGTS 277
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI00193C4176 (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193C4176) HSP 1 Score: 185 bits (470), Expect = 4.990e-53 Identity = 110/255 (43.14%), Postives = 145/255 (56.86%), Query Frame = 1
Query: 1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKS 699
KRG+AY +E + AL+ +S++YNW+ T A G+ F PM+W LA + LLGFNEPNF Q+ TPS+AAALWP + +A+ ++ SPAVNYCG C+ + DP+ +LD FFA C CKVDY+A H Y C++ L R+ KY KP+ LTEF+C D+P + Q +YM AV YLE P V YAWF+G++ E P INL G QLT LG+LY L S
Sbjct: 31 KRGVAYGYHSAEDMKALSVGMSWWYNWASTPDAGAAGVYASLGVSFAPMVWGGTPNADQLAAAIPAGAEYLLGFNEPNFRWQANKTPSQAAALWPILEEVARRRNLKLVSPAVNYCG-ECVSEGGVTYSDPVAYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVNYLENEPAVFRYAWFSGRNNEIPHINLLGASGQLTELGQLYVSLPS 279
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: S9QRC8_9DELT (Putative secreted protein n=4 Tax=Cystobacter TaxID=42 RepID=S9QRC8_9DELT) HSP 1 Score: 185 bits (469), Expect = 8.060e-53 Identity = 108/250 (43.20%), Postives = 143/250 (57.20%), Query Frame = 1
Query: 1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRG+AY +E + AL+ +S++YNW+ T A G+ F PM+W LA T LLGFNEPNF Q+ TPS AAALWP + +A+ ++ SPAVNYCG +C+ + DP+V+LD FFA+C C+VDYVA H Y C++ L + KY KP+ LTEF+C D P + Q +YM AVTYLE P V Y+WF+ ++ E P+INL G QLT LG LY
Sbjct: 32 KRGVAYGYHSAEDMKALSKGISWWYNWASTPEAGAASVASSVGVSFVPMVWGGTPNADQLAASIPAGTQYLLGFNEPNFKSQARKTPSEAAALWPILEDVARRKNLKLASPAVNYCG-DCVSEGGVTFTDPVVYLDAFFAKCTN-----CQVDYVAVHWYACDLSALKWYIGLFKKYNKPIWLTEFACGDRPHDQITLDVQKKYMTDAVTYLESEPAVFRYSWFSARNNEIPNINLLGASGQLTELGNLY 275
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI0018CB9D21 (glycoside hydrolase family protein n=1 Tax=Hymenobacter guriensis TaxID=2793065 RepID=UPI0018CB9D21) HSP 1 Score: 183 bits (465), Expect = 1.140e-52 Identity = 106/250 (42.40%), Postives = 146/250 (58.40%), Query Frame = 1
Query: 1 KRGIAYDLKRS-EVAALAGPVSFFYNWSPTQS--------ARGMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRG+AY + ++ LA +S++YNW+PT + G++F PM+W DL T LLGFNEPNF Q+ + P+ AAA W + + A+ G ++ SPAVNYCG +C+ + DP+ +LD FFA C CKVDY+A H Y C++ L R+ KY KP+ LTEF+C D+P + +Q YMKAAV YLE P V YAWF+G++ E +INL G+ QLT LG+LY
Sbjct: 31 KRGLAYGQHTAADLRVLAPGISWWYNWAPTPENAVKDMYRSAGVEFVPMVWGGTPKANDLVFTLPYDTKTLLGFNEPNFLTQANIPPTVAAARWKELEQTARQRGLKLASPAVNYCG-DCVTENGQKFTDPVDYLDAFFAACPT-----CKVDYIAVHWYACDLGALQWYIGRFKKYDKPIWLTEFACGDLPHAQITLAKQKDYMKAAVNYLENEPGVARYAWFSGRNGEISNINLLGDYGQLTELGQLY 274
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A126PGZ9_9BACT (Carbohydrate-binding protein n=2 Tax=Hymenobacter sp. PAMC 26628 TaxID=1484118 RepID=A0A126PGZ9_9BACT) HSP 1 Score: 184 bits (467), Expect = 1.460e-52 Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 1
Query: 1 KRGIAYDLKRS-EVAALAGPVSFFYNWS--PTQSARGM------KFYPMIWAEK---------DLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKD------PIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFG-ERQLTPLGKLY 684
KRG+AYD K + ++ ALA S++YN++ P S G+ + P+ W + LA T LLGFNEPNF QS LTP++AAA+WP + +A+ ++ SPA+NYCG NC++++ P +LD FFA C C+VDY+A H+YVCE QYL Q+ KY KP+ LTEF+C D P + Q +YM AV YLE P + YAWF+G++ E P+INL G + QLT LG+ Y
Sbjct: 35 KRGLAYDYKSAADLQALAPGTSWWYNYTSVPDASVAGVYGGLAVDYVPIQWGSRLNNGPVTADQLAANIPAGTQYLLGFNEPNFLSQSNLTPTQAAAIWPVLQEVARRKNLKLVSPALNYCG-NCVQENGVTYYSPTQYLDAFFAACPN-----CQVDYIALHTYVCEEQYLRQKVAEVKKYNKPIWLTEFACGDAPAAQITLATQKKYMLDAVNYLENEPAIFRYAWFSGRNNEIPNINLLGADGQLTALGQQY 283
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI0018CCA256 (glycosyl hydrolase n=1 Tax=Hymenobacter terrenus TaxID=1629124 RepID=UPI0018CCA256) HSP 1 Score: 184 bits (468), Expect = 2.030e-52 Identity = 109/260 (41.92%), Postives = 145/260 (55.77%), Query Frame = 1
Query: 1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWAE--------------KDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKD------PIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
KRG+AY +++ ALA +S++YNW+P A G+ + PM W +LA T+ LLGFNEPNF Q+ LTPS+AAALWP + +A+ ++ SPAVNYCG C+ ++ P +LD FFA C C+VDY+A H+YVCE +YL + KY KP+ LTEFSC D+P + Q Y+ AAV YLE P V YAWF+G+ + P INL G QLT LG+LY
Sbjct: 36 KRGLAYGYHSAADMQALAPGISWWYNWAPRPDAGVANLYQGLGIDYVPMQWGRYRDGNNQDGSTFSADELAANIPAGTNYLLGFNEPNFLSQANLTPSQAAALWPRLQEVARRKNLKLVSPAVNYCG-GCVSENGTTYYSPTQYLDAFFAACPT-----CQVDYIAVHTYVCEERYLRDKIAELKKYNKPIWLTEFSCGDIPTDQITLNTQKGYLAAAVNYLENEPAVFRYAWFSGRDNQIPFINLLGNSGQLTELGQLY 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1598.1.1 >prot_P-wetherbeei_contig1598.1.1 ID=prot_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp KRGIAYDLKRSEVAALAGPVSFFYNWSPTQSARGMKFYPMIWAEKDLARPback to top mRNA from alignment at P-wetherbeei_contig1598:830..1549- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1598.1.1 ID=mRNA_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:830..1549- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1598:830..1549- >mRNA_P-wetherbeei_contig1598.1.1 ID=mRNA_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:830..1549- (Phaeothamnion wetherbeei SAG_119_79)back to top |