mRNA_P-wetherbeei_contig1598.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1598.1.1
Unique NamemRNA_P-wetherbeei_contig1598.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI001CC9E7EA (glycosyl hydrolase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CC9E7EA)

HSP 1 Score: 191 bits (484), Expect = 3.500e-55
Identity = 114/252 (45.24%), Postives = 149/252 (59.13%), Query Frame = 1
Query:    1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPT---------QSARGMKFYPMIW-----AEKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRG+ Y    +E + AL+  +S++YNWSP          QSA G+ F PM+W     A++  A  P      LLGFNEPNF  Q+ +TPSRAAALWP +  +A+    ++ SPAVNYCG +C+ +      DP+ +LD FFA C       CKVDY+A H Y C+V  L     R+ KY KP+ LTEF+C D+P    +   Q +YM AAV YLE  P V  YAWF+G++ E P INL G   QLT LG+LY
Sbjct:   25 KRGLGYGYHSAEDMLALSRGMSWWYNWSPKPDSGAAGVYQSA-GVAFVPMVWGGTPNADQVAAAIPAG-AQYLLGFNEPNFRSQANMTPSRAAALWPILEEVARRKNLKLVSPAVNYCG-DCVSEGGVTYSDPVTYLDAFFAACTN-----CKVDYIAVHWYACDVGALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAIQKQYMTAAVNYLENEPAVFRYAWFSGRNNEIPHINLLGNSGQLTELGQLY 268          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A1I2ARD7_9DELT (Glycosyl hydrolase catalytic core n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ARD7_9DELT)

HSP 1 Score: 186 bits (473), Expect = 1.880e-54
Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 1
Query:    1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQS-------ARGMKFYPMIWAEKDLAR-PPLQK-TDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKDPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRGIAY     +++AALA  VS++YNW+           A  ++F PM+W    L + PP+ +    LL FNEPNFG Q+ LTP  AAALWP V  +A + G  I SPA+NYCG +C + DP  W D FFA C       C+VD++A H Y C    L        KY +P+ LTEFSCLD   ++ + Q +YM+ A+ YLE  P V  YAWF+G+    P+++L GE   LT LG+ Y
Sbjct:   82 KRGIAYGYHSHADLAALAPGVSWWYNWAVPPDPDVGDYQALNVEFVPMLWGGGSLDQDPPIPEGARYLLAFNEPNFGAQADLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGDCNKTDPFEWFDEFFAACP-----GCRVDHLAVHWYACTRDALTWYIGEMKKYERPIWLTEFSCLDAEDKSVAVQKQYMQEALEYLEAEPSVARYAWFSGRWEATPTVDLLGESGALTELGQQY 315          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: Q098D0_STIAD (F5/8 type C domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) TaxID=378806 RepID=Q098D0_STIAD)

HSP 1 Score: 189 bits (479), Expect = 2.460e-54
Identity = 111/256 (43.36%), Postives = 150/256 (58.59%), Query Frame = 1
Query:    1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQSAR--------GMKFYPMIW-----AEKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKS 699
            KRGI+Y     +++ AL+  +S++YNWSP   A         G+ F PM+W     A++  A+ P      LLGFNEPNF  Q+ +TPSRAA+LWP +  +A+    ++ SPAVNYCG +C+ +      DP+ +LD FFA C       CKVDYVA H Y C+V  L+     + KY KP+ LTEF+C D P    +   Q +YM  AV YLE  P V  Y+WF+G++ E P+INL G   QLT LG+LY  L S
Sbjct:   35 KRGISYGYHSAADMTALSAGISWWYNWSPQPEAGAASVAPSVGVSFVPMVWGGTPNADQLAAQIPAG-AQYLLGFNEPNFKSQANMTPSRAASLWPVLEDVARRKNLKLVSPAVNYCG-DCVSEGGTTFTDPVAYLDAFFAACTN-----CKVDYVAVHWYACDVSALSWYIGLFKKYNKPIWLTEFACGDRPHNEITLAVQKKYMTDAVNYLENEPAVFRYSWFSGRNSEIPNINLLGNSGQLTELGQLYVSLPS 283          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI001951F8FD (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001951F8FD)

HSP 1 Score: 188 bits (478), Expect = 3.150e-54
Identity = 109/250 (43.60%), Postives = 145/250 (58.00%), Query Frame = 1
Query:    1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRG+ Y    +E + AL+  +S++YNWSPT  A         G+ F PM+W        LA         LLGFNEPNF  QS +TPS+AAA WP +  +A+    ++ +PAVNYCG +C+ +      DP+ +LD FFA C       CKVDY+A H Y C++  L     R+ KY KP+ LTEF+C D+P    +   Q +YM  AVTYLE  P V  YAWF+G++ E P+INL G   QLT LG+LY
Sbjct:   30 KRGLGYGYHSAEDMKALSKGMSWWYNWSPTPEAGAASVYTSVGVSFVPMVWGGTPNADQLAAAIPAGAQYLLGFNEPNFIYQSNMTPSQAAARWPVLEEVARRRNLKLVAPAVNYCG-DCVSEGGVTYSDPVTYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVTYLENEPAVFRYAWFSGRNNEIPNINLLGASGQLTELGQLY 273          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A085VZK6_9DELT (Putative secreted protein n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085VZK6_9DELT)

HSP 1 Score: 185 bits (470), Expect = 4.330e-53
Identity = 109/259 (42.08%), Postives = 147/259 (56.76%), Query Frame = 1
Query:    1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSA--------RGMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKSCTTD 711
            KRG+ Y    ++ + AL+  +S++YNWSPT  A         G+ F PM+W        LA      T  LLGFNEPNF  Q+ +TPSRAA LWP +  +A+  G ++ +PAVNYCG +C+ +      DP+ +LD FFA C      +C+VDY+A H Y C++  L      + KY KP+ LTEF+C D P    +   Q +YM  AV YLE  P V  YAWF+G++ E P+INL G   QLT LG+LY  L    T 
Sbjct:   25 KRGLGYGYHSAQDMQALSRGMSWWYNWSPTPEAGAAGVYQSAGVAFVPMVWGGTPNADQLAASIPAGTQYLLGFNEPNFRSQANMTPSRAAQLWPILEDVARRKGLKLVAPAVNYCG-DCVSEGGVTFSDPVTYLDAFFAACP-----SCQVDYIAVHWYACDLGALQWYIGLFKKYNKPIWLTEFACGDRPHDQITLALQKQYMTDAVNYLENEPAVFRYAWFSGRNNEIPNINLLGNSGQLTELGQLYVSLPFAGTS 277          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI00193C4176 (Discoidin domain-containing protein n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193C4176)

HSP 1 Score: 185 bits (470), Expect = 4.990e-53
Identity = 110/255 (43.14%), Postives = 145/255 (56.86%), Query Frame = 1
Query:    1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLYKVLKS 699
            KRG+AY    +E + AL+  +S++YNW+ T  A         G+ F PM+W        LA       + LLGFNEPNF  Q+  TPS+AAALWP +  +A+    ++ SPAVNYCG  C+ +      DP+ +LD FFA C       CKVDY+A H Y C++  L     R+ KY KP+ LTEF+C D+P    +   Q +YM  AV YLE  P V  YAWF+G++ E P INL G   QLT LG+LY  L S
Sbjct:   31 KRGVAYGYHSAEDMKALSVGMSWWYNWASTPDAGAAGVYASLGVSFAPMVWGGTPNADQLAAAIPAGAEYLLGFNEPNFRWQANKTPSQAAALWPILEEVARRRNLKLVSPAVNYCG-ECVSEGGVTYSDPVAYLDAFFAACTN-----CKVDYIAVHWYACDLSALQWYIGRFKKYNKPIWLTEFACGDMPHDQITLAVQKKYMTDAVNYLENEPAVFRYAWFSGRNNEIPHINLLGASGQLTELGQLYVSLPS 279          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: S9QRC8_9DELT (Putative secreted protein n=4 Tax=Cystobacter TaxID=42 RepID=S9QRC8_9DELT)

HSP 1 Score: 185 bits (469), Expect = 8.060e-53
Identity = 108/250 (43.20%), Postives = 143/250 (57.20%), Query Frame = 1
Query:    1 KRGIAYDLKRSE-VAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNASQ--QARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRG+AY    +E + AL+  +S++YNW+ T  A         G+ F PM+W        LA      T  LLGFNEPNF  Q+  TPS AAALWP +  +A+    ++ SPAVNYCG +C+ +      DP+V+LD FFA+C       C+VDYVA H Y C++  L      + KY KP+ LTEF+C D P    +   Q +YM  AVTYLE  P V  Y+WF+ ++ E P+INL G   QLT LG LY
Sbjct:   32 KRGVAYGYHSAEDMKALSKGISWWYNWASTPEAGAASVASSVGVSFVPMVWGGTPNADQLAASIPAGTQYLLGFNEPNFKSQARKTPSEAAALWPILEDVARRKNLKLASPAVNYCG-DCVSEGGVTFTDPVVYLDAFFAKCTN-----CQVDYVAVHWYACDLSALKWYIGLFKKYNKPIWLTEFACGDRPHDQITLDVQKKYMTDAVTYLESEPAVFRYSWFSARNNEIPNINLLGASGQLTELGNLY 275          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI0018CB9D21 (glycoside hydrolase family protein n=1 Tax=Hymenobacter guriensis TaxID=2793065 RepID=UPI0018CB9D21)

HSP 1 Score: 183 bits (465), Expect = 1.140e-52
Identity = 106/250 (42.40%), Postives = 146/250 (58.40%), Query Frame = 1
Query:    1 KRGIAYDLKRS-EVAALAGPVSFFYNWSPTQS--------ARGMKFYPMIWA----EKDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEK------DPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRG+AY    + ++  LA  +S++YNW+PT          + G++F PM+W       DL       T  LLGFNEPNF  Q+ + P+ AAA W  + + A+  G ++ SPAVNYCG +C+ +      DP+ +LD FFA C       CKVDY+A H Y C++  L     R+ KY KP+ LTEF+C D+P    +  +Q  YMKAAV YLE  P V  YAWF+G++ E  +INL G+  QLT LG+LY
Sbjct:   31 KRGLAYGQHTAADLRVLAPGISWWYNWAPTPENAVKDMYRSAGVEFVPMVWGGTPKANDLVFTLPYDTKTLLGFNEPNFLTQANIPPTVAAARWKELEQTARQRGLKLASPAVNYCG-DCVTENGQKFTDPVDYLDAFFAACPT-----CKVDYIAVHWYACDLGALQWYIGRFKKYDKPIWLTEFACGDLPHAQITLAKQKDYMKAAVNYLENEPGVARYAWFSGRNGEISNINLLGDYGQLTELGQLY 274          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: A0A126PGZ9_9BACT (Carbohydrate-binding protein n=2 Tax=Hymenobacter sp. PAMC 26628 TaxID=1484118 RepID=A0A126PGZ9_9BACT)

HSP 1 Score: 184 bits (467), Expect = 1.460e-52
Identity = 108/255 (42.35%), Postives = 149/255 (58.43%), Query Frame = 1
Query:    1 KRGIAYDLKRS-EVAALAGPVSFFYNWS--PTQSARGM------KFYPMIWAEK---------DLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKD------PIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFG-ERQLTPLGKLY 684
            KRG+AYD K + ++ ALA   S++YN++  P  S  G+       + P+ W  +          LA      T  LLGFNEPNF  QS LTP++AAA+WP +  +A+    ++ SPA+NYCG NC++++      P  +LD FFA C       C+VDY+A H+YVCE QYL Q+     KY KP+ LTEF+C D P    +   Q +YM  AV YLE  P +  YAWF+G++ E P+INL G + QLT LG+ Y
Sbjct:   35 KRGLAYDYKSAADLQALAPGTSWWYNYTSVPDASVAGVYGGLAVDYVPIQWGSRLNNGPVTADQLAANIPAGTQYLLGFNEPNFLSQSNLTPTQAAAIWPVLQEVARRKNLKLVSPALNYCG-NCVQENGVTYYSPTQYLDAFFAACPN-----CQVDYIALHTYVCEEQYLRQKVAEVKKYNKPIWLTEFACGDAPAAQITLATQKKYMLDAVNYLENEPAIFRYAWFSGRNNEIPNINLLGADGQLTALGQQY 283          
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Match: UPI0018CCA256 (glycosyl hydrolase n=1 Tax=Hymenobacter terrenus TaxID=1629124 RepID=UPI0018CCA256)

HSP 1 Score: 184 bits (468), Expect = 2.030e-52
Identity = 109/260 (41.92%), Postives = 145/260 (55.77%), Query Frame = 1
Query:    1 KRGIAYDL-KRSEVAALAGPVSFFYNWSPTQSAR--------GMKFYPMIWAE--------------KDLARPPLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAVNYCGTNCIEKD------PIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQQAHRYLKYGKPLMLTEFSCLDVPGQNAS--QQARYMKAAVTYLEQNPHVTHYAWFTGKSVEFPSINLFGER-QLTPLGKLY 684
            KRG+AY     +++ ALA  +S++YNW+P   A         G+ + PM W                 +LA      T+ LLGFNEPNF  Q+ LTPS+AAALWP +  +A+    ++ SPAVNYCG  C+ ++      P  +LD FFA C       C+VDY+A H+YVCE +YL  +     KY KP+ LTEFSC D+P    +   Q  Y+ AAV YLE  P V  YAWF+G+  + P INL G   QLT LG+LY
Sbjct:   36 KRGLAYGYHSAADMQALAPGISWWYNWAPRPDAGVANLYQGLGIDYVPMQWGRYRDGNNQDGSTFSADELAANIPAGTNYLLGFNEPNFLSQANLTPSQAAALWPRLQEVARRKNLKLVSPAVNYCG-GCVSENGTTYYSPTQYLDAFFAACPT-----CQVDYIAVHTYVCEERYLRDKIAELKKYNKPIWLTEFSCGDIPTDQITLNTQKGYLAAAVNYLENEPAVFRYAWFSGRDNQIPFINLLGNSGQLTELGQLY 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1598.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CC9E7EA3.500e-5545.24glycosyl hydrolase n=1 Tax=Cystobacter gracilis Ta... [more]
A0A1I2ARD7_9DELT1.880e-5443.51Glycosyl hydrolase catalytic core n=1 Tax=Nannocys... [more]
Q098D0_STIAD2.460e-5443.36F5/8 type C domain protein n=1 Tax=Stigmatella aur... [more]
UPI001951F8FD3.150e-5443.60Discoidin domain-containing protein n=2 Tax=Archan... [more]
A0A085VZK6_9DELT4.330e-5342.08Putative secreted protein n=1 Tax=Hyalangium minut... [more]
UPI00193C41764.990e-5343.14Discoidin domain-containing protein n=2 Tax=Archan... [more]
S9QRC8_9DELT8.060e-5343.20Putative secreted protein n=4 Tax=Cystobacter TaxI... [more]
UPI0018CB9D211.140e-5242.40glycoside hydrolase family protein n=1 Tax=Hymenob... [more]
A0A126PGZ9_9BACT1.460e-5242.35Carbohydrate-binding protein n=2 Tax=Hymenobacter ... [more]
UPI0018CCA2562.030e-5241.92glycosyl hydrolase n=1 Tax=Hymenobacter terrenus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1598contigP-wetherbeei_contig1598:830..1549 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FKU0
Preferred nameTOS1
PFAMsDUF2401,DUF2403
Model size720
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000271,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0003843,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005975,GO:0005976,GO:0006073,GO:0006074,GO:0006075,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009272,GO:0009277,GO:0009987,GO:0010383,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0033692,GO:0034406,GO:0034407,GO:0034410,GO:0034411,GO:0034637,GO:0034645,GO:0035251,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0051273,GO:0051274,GO:0051278,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0071969,GO:0071970,GO:1901576
Exons1
Evalue1.87e-57
EggNOG OGs2CBPA@1|root,2QSI7@2759|Eukaryota
DescriptionPutative TOS1-like glycosyl hydrolase (DUF2401)
Cds size720
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186073.3048966-CDS-P-wetherbeei_contig1598:829..15491683186073.3048966-CDS-P-wetherbeei_contig1598:829..1549Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1598 830..1549 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1598.1.1prot_P-wetherbeei_contig1598.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1598 830..1549 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1598.1.1

>prot_P-wetherbeei_contig1598.1.1 ID=prot_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=240bp
KRGIAYDLKRSEVAALAGPVSFFYNWSPTQSARGMKFYPMIWAEKDLARP
PLQKTDILLGFNEPNFGDQSALTPSRAAALWPNVVRIAKSIGARIGSPAV
NYCGTNCIEKDPIVWLDTFFAECKRLTGAACKVDYVAFHSYVCEVQYLNQ
QAHRYLKYGKPLMLTEFSCLDVPGQNASQQARYMKAAVTYLEQNPHVTHY
AWFTGKSVEFPSINLFGERQLTPLGKLYKVLKSCTTDLM*
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mRNA from alignment at P-wetherbeei_contig1598:830..1549-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1598.1.1 ID=mRNA_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:830..1549- (Phaeothamnion wetherbeei SAG_119_79)
AAACGAGGGATTGCATATGACTTGAAACGTTCAGAAGTTGCCGCGCTAGC TGGACCCGTGTCCTTCTTTTACAACTGGTCTCCGACGCAGTCTGCCCGTG GTATGAAGTTTTATCCCATGATATGGGCCGAAAAAGACCTTGCACGCCCG CCATTACAAAAAACCGACATCTTGCTTGGTTTTAACGAGCCAAATTTTGG TGACCAGAGCGCGTTGACTCCGTCGAGAGCCGCCGCGCTGTGGCCCAATG TTGTACGCATTGCAAAGTCCATTGGCGCTCGAATTGGATCGCCTGCCGTC AACTACTGCGGCACCAATTGTATTGAGAAGGACCCCATTGTGTGGCTGGA TACCTTTTTTGCAGAATGCAAGAGACTTACCGGAGCTGCGTGCAAAGTTG ACTACGTTGCGTTCCATTCCTATGTGTGTGAAGTTCAGTATTTAAACCAA CAGGCACATCGATATCTCAAGTACGGCAAGCCCTTGATGCTGACAGAATT TTCGTGTCTAGACGTTCCTGGACAGAATGCGTCCCAGCAGGCACGGTACA TGAAGGCCGCCGTAACCTACCTTGAACAGAATCCGCATGTGACGCATTAC GCCTGGTTTACTGGAAAGAGCGTCGAGTTTCCCAGTATCAACTTGTTCGG AGAAAGACAATTAACTCCCCTAGGTAAACTGTACAAGGTTTTGAAGAGTT GCACAACGGACCTGATGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1598:830..1549-

>mRNA_P-wetherbeei_contig1598.1.1 ID=mRNA_P-wetherbeei_contig1598.1.1|Name=mRNA_P-wetherbeei_contig1598.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig1598:830..1549- (Phaeothamnion wetherbeei SAG_119_79)
AAACGAGGGATTGCATATGACTTGAAACGTTCAGAAGTTGCCGCGCTAGC
TGGACCCGTGTCCTTCTTTTACAACTGGTCTCCGACGCAGTCTGCCCGTG
GTATGAAGTTTTATCCCATGATATGGGCCGAAAAAGACCTTGCACGCCCG
CCATTACAAAAAACCGACATCTTGCTTGGTTTTAACGAGCCAAATTTTGG
TGACCAGAGCGCGTTGACTCCGTCGAGAGCCGCCGCGCTGTGGCCCAATG
TTGTACGCATTGCAAAGTCCATTGGCGCTCGAATTGGATCGCCTGCCGTC
AACTACTGCGGCACCAATTGTATTGAGAAGGACCCCATTGTGTGGCTGGA
TACCTTTTTTGCAGAATGCAAGAGACTTACCGGAGCTGCGTGCAAAGTTG
ACTACGTTGCGTTCCATTCCTATGTGTGTGAAGTTCAGTATTTAAACCAA
CAGGCACATCGATATCTCAAGTACGGCAAGCCCTTGATGCTGACAGAATT
TTCGTGTCTAGACGTTCCTGGACAGAATGCGTCCCAGCAGGCACGGTACA
TGAAGGCCGCCGTAACCTACCTTGAACAGAATCCGCATGTGACGCATTAC
GCCTGGTTTACTGGAAAGAGCGTCGAGTTTCCCAGTATCAACTTGTTCGG
AGAAAGACAATTAACTCCCCTAGGTAAACTGTACAAGGTTTTGAAGAGTT
GCACAACGGACCTGATGTGA
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