mRNA_P-wetherbeei_contig15943.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15943.1.1
Unique NamemRNA_P-wetherbeei_contig15943.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A833G3R1_9HYPH (Bifunctional metallophosphatase/5'-nucleotidase n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G3R1_9HYPH)

HSP 1 Score: 77.8 bits (190), Expect = 3.350e-15
Identity = 34/65 (52.31%), Postives = 52/65 (80.00%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIY 195
            V+ ++++G DLR++LEN L+R+P AAGRFPQVSG+ +E DP+RP G RI +I++G  AL+  ++Y
Sbjct:  386 VVIVEVTGKDLRRALENGLSRMPEAAGRFPQVSGLTMEVDPKRPVGDRIVAIKVGDLALSETRLY 450          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: S9SC42_MAGFU (5'-nucleotidase/2',3'-cyclic phosphodiesterase n=2 Tax=Magnetospirillum fulvum TaxID=1082 RepID=S9SC42_MAGFU)

HSP 1 Score: 73.9 bits (180), Expect = 7.630e-14
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            VM +++SG  LR +LE  L  L   AGRFPQVSG+ V YDP RPAG+RI ++ IGGA L  +K+YR
Sbjct:  376 VMLLELSGAQLRAALEYGLTGLDTKAGRFPQVSGLSVSYDPSRPAGQRIVAVTIGGAPLQDDKLYR 441          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: H8FRJ5_MAGML (5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase n=1 Tax=Magnetospirillum molischianum DSM 120 TaxID=1150626 RepID=H8FRJ5_MAGML)

HSP 1 Score: 71.2 bits (173), Expect = 6.790e-13
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            VM +++SG  LR +LE+ L+ +   AGRFPQVSG+ VEY P RP G+RI SI IGG AL  +K YR
Sbjct:  376 VMLLELSGTQLRAALEHGLSGIETKAGRFPQVSGISVEYAPSRPVGQRIVSIFIGGMALQDDKTYR 441          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A0S3PVN4_9BRAD (Trifunctional nucleotide phosphoesterase protein YfkN n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PVN4_9BRAD)

HSP 1 Score: 70.5 bits (171), Expect = 1.270e-12
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            V+ ++++G  L+ S+EN L+RLP A GRFPQVSGM VE+   RP G RI  + + GA L+ N++YR
Sbjct:  388 VVVVEMTGRALKASIENGLSRLPEATGRFPQVSGMHVEFQVSRPPGNRIIKMSVAGAPLDENRVYR 453          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A2S0N7R1_9HYPH (Bifunctional metallophosphatase/5'-nucleotidase n=1 Tax=Phreatobacter cathodiphilus TaxID=1868589 RepID=A0A2S0N7R1_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 3.240e-12
Identity = 30/60 (50.00%), Postives = 46/60 (76.67%), Query Frame = 1
Query:   16 ISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIY 195
            +SG D+RQ+LEN ++++   AGRFP VS + VE DPRRPAG R+ S+++GG  L+ +++Y
Sbjct:  392 VSGADIRQALENGVSQVEQRAGRFPHVSNLTVEVDPRRPAGSRVVSVQVGGQPLDDDRVY 451          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A2T4ZHG6_9HYPH (2',3'-cyclic-nucleotide 2'-phosphodiesterase (5'-nucleotidase family) n=1 Tax=Phreatobacter oligotrophus TaxID=1122261 RepID=A0A2T4ZHG6_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 3.240e-12
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:   16 ISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIY 195
            +SG DLRQ+LEN ++++   AGRFP VS + VE DPRRP+G R+ S+++GG  L+ ++IY
Sbjct:  392 VSGADLRQALENGVSQVEQRAGRFPHVSNLTVEVDPRRPSGSRVVSVQVGGQPLDDDRIY 451          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: UPI001C2BFB66 (5'-nucleotidase C-terminal domain-containing protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2BFB66)

HSP 1 Score: 67.8 bits (164), Expect = 9.330e-12
Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            VM ++ISG DL  +L N ++++  A GRFPQVSG+ + YDP+ PA  R+R +R+GG  L+  + YR
Sbjct:  217 VMLLEISGADLLTALRNGVSKVEEADGRFPQVSGLTMTYDPQAPAANRVREVRVGGQPLDPARRYR 282          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A6A7Y4J8_9HYPH (Bifunctional metallophosphatase/5'-nucleotidase n=1 Tax=Segnochrobactrum spirostomi TaxID=2608987 RepID=A0A6A7Y4J8_9HYPH)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-11
Identity = 29/63 (46.03%), Postives = 45/63 (71.43%), Query Frame = 1
Query:   10 IDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            ++ISG D+R +LEN  + + + AGRFPQVSG++V  DP +PAG R+ S+ +GG  L+  + Y+
Sbjct:  392 VEISGADVRAALENGFSMMDSGAGRFPQVSGLVVTVDPAKPAGSRVVSVTVGGEPLSPERFYK 454          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: A0A840YCT3_9PROT (5'-nucleotidase n=1 Tax=Roseomonas pecuniae TaxID=693023 RepID=A0A840YCT3_9PROT)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-11
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 1
Query:    7 TIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            T+ I G  LR +LEN L+RLPAAAGRFPQV+G+ + +DP  P G+R+R +R     L  ++ YR
Sbjct:  416 TLTIRGGALRAALENGLSRLPAAAGRFPQVAGLRIAFDPAAPPGQRLREVRTADGPLENDRAYR 479          
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Match: UPI001BB87117 (Bifunctional metallophosphatase/5'-nucleotidase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001BB87117)

HSP 1 Score: 67.4 bits (163), Expect = 1.550e-11
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 1
Query:    1 VMTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRSIRIGGAALNLNKIYR 198
            V+ ++ISG DL  ++EN LA++P  AGRFPQVSGM V +DP++P  +R+ S+ I G  +   ++YR
Sbjct:  388 VVVVEISGADLLLAMENGLAQVPVPAGRFPQVSGMKVAFDPKQPMRKRVVSMEIAGKPVEPARVYR 453          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15943.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A833G3R1_9HYPH3.350e-1552.31Bifunctional metallophosphatase/5'-nucleotidase n=... [more]
S9SC42_MAGFU7.630e-1456.065'-nucleotidase/2',3'-cyclic phosphodiesterase n=2... [more]
H8FRJ5_MAGML6.790e-1356.065'-nucleotidase/2',3'-cyclic phosphodiesterase and... [more]
A0A0S3PVN4_9BRAD1.270e-1250.00Trifunctional nucleotide phosphoesterase protein Y... [more]
A0A2S0N7R1_9HYPH3.240e-1250.00Bifunctional metallophosphatase/5'-nucleotidase n=... [more]
A0A2T4ZHG6_9HYPH3.240e-1251.672',3'-cyclic-nucleotide 2'-phosphodiesterase (5'-n... [more]
UPI001C2BFB669.330e-1246.975'-nucleotidase C-terminal domain-containing prote... [more]
A0A6A7Y4J8_9HYPH1.130e-1146.03Bifunctional metallophosphatase/5'-nucleotidase n=... [more]
A0A840YCT3_9PROT1.130e-1150.005'-nucleotidase n=1 Tax=Roseomonas pecuniae TaxID=... [more]
UPI001BB871171.550e-1146.97Bifunctional metallophosphatase/5'-nucleotidase n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15943contigP-wetherbeei_contig15943:133..330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1316936.K678_09973
PFAMs5_nucleotid_C,Metallophos
Model size198
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00017
KEGG koko:K01081,ko:K11751
KEGG ReactionR00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346
KEGG Pathwayko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.06e-14
EggNOG OGsCOG0737@1|root,COG0737@2|Bacteria,1MX03@1224|Proteobacteria,2TTUP@28211|Alphaproteobacteria,2JRGM@204441|Rhodospirillales
EC3.1.3.5,3.6.1.45
DescriptionBelongs to the 5'-nucleotidase family
Cds size195
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186072.3263867-UTR-P-wetherbeei_contig15943:132..1351683186072.3263867-UTR-P-wetherbeei_contig15943:132..135Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15943 133..135 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186072.3400726-CDS-P-wetherbeei_contig15943:135..3301683186072.3400726-CDS-P-wetherbeei_contig15943:135..330Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15943 136..330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15943.1.1prot_P-wetherbeei_contig15943.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15943 136..330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15943.1.1

>prot_P-wetherbeei_contig15943.1.1 ID=prot_P-wetherbeei_contig15943.1.1|Name=mRNA_P-wetherbeei_contig15943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp
MTIDISGYDLRQSLENSLARLPAAAGRFPQVSGMIVEYDPRRPAGRRIRS
IRIGGAALNLNKIYR
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mRNA from alignment at P-wetherbeei_contig15943:133..330+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15943.1.1 ID=mRNA_P-wetherbeei_contig15943.1.1|Name=mRNA_P-wetherbeei_contig15943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig15943:133..330+ (Phaeothamnion wetherbeei SAG_119_79)
GTCATGACGATCGATATTTCCGGCTACGATCTGCGCCAGTCGCTAGAGAA CAGCCTCGCGCGGCTGCCCGCCGCCGCCGGGCGTTTTCCGCAGGTGTCCG GCATGATCGTCGAATACGATCCGCGCCGGCCCGCCGGCCGCCGCATCCGC TCGATCAGGATCGGCGGCGCGGCGCTCAACCTCAACAAGATCTACCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15943:133..330+

>mRNA_P-wetherbeei_contig15943.1.1 ID=mRNA_P-wetherbeei_contig15943.1.1|Name=mRNA_P-wetherbeei_contig15943.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=195bp|location=Sequence derived from alignment at P-wetherbeei_contig15943:133..330+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGATCGATATTTCCGGCTACGATCTGCGCCAGTCGCTAGAGAACAG
CCTCGCGCGGCTGCCCGCCGCCGCCGGGCGTTTTCCGCAGGTGTCCGGCA
TGATCGTCGAATACGATCCGCGCCGGCCCGCCGGCCGCCGCATCCGCTCG
ATCAGGATCGGCGGCGCGGCGCTCAACCTCAACAAGATCTACCGG
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