prot_P-wetherbeei_contig1592.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1592.1.1
Unique Nameprot_P-wetherbeei_contig1592.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length39
Homology
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BLAST of mRNA_P-wetherbeei_contig1592.1.1 vs. uniprot
Match: D7FW36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW36_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 9.450e-7
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 RLHDCLLAALRVLLNVTHHNADACGAVAAAGGLPMLLSC 39
            ++H+CLLAALRVL+NVTHH+A  C  VAA  GL  L+ C
Sbjct:  342 KVHECLLAALRVLINVTHHDARVCAEVAAKRGLEALMRC 380
[Close]
BLAST of mRNA_P-wetherbeei_contig1592.1.1 vs. uniprot
Match: A0A6H5JF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF40_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 4.520e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    1 RLHDCLLAALRVLLNVTHHNADACGAVAAAGGLPMLLSC 39
            ++H+CLLAALRVL+NVTHH+   C  VAA  GL  L+ C
Sbjct:  507 KVHECLLAALRVLINVTHHDPRVCAEVAARRGLETLMRC 545
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1592.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW36_ECTSI9.450e-761.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF40_9PHAE4.520e-658.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..39
e-value: 3.5E-9
score: 37.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1592contigP-wetherbeei_contig1592:98..214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1592.1.1mRNA_P-wetherbeei_contig1592.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1592 98..214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1592.1.1 ID=prot_P-wetherbeei_contig1592.1.1|Name=mRNA_P-wetherbeei_contig1592.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=39bp
RLHDCLLAALRVLLNVTHHNADACGAVAAAGGLPMLLSC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like