mRNA_P-wetherbeei_contig1587.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig1587.2.1
Unique Name	mRNA_P-wetherbeei_contig1587.2.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A835YTX2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.850e-31
Identity = 86/198 (43.43%), Postives = 112/198 (56.57%), Query Frame = 1

Query: 4003 VFSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTP--THQAYTILAAFTVVLYPVGIPALYGVILWK------DRHRVASRGRSGRNAESLERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDG--YMLGILSI*FSTFFALAIKMELSGKKTAKA 4566
            V +FL++S  S  VF+T+ CD L        G SYLR DYS+ CD    TH  Y+I AAF +V+YPVGIPALY  ILW+      DR ++ SR  S      L RPYK      E AEC+ RL+L G LVFI+PGS GQ AV+C+FA  T  +Y    P  +R D   Y LG   +  S F +L ++++     + KA
Sbjct:  110 VSTFLIFSGVSLTVFETFGCDEL------NTGKSYLRADYSLRCDDEEGTHAKYSIYAAFMIVVYPVGIPALYASILWRSAVRQRDRTQLPSRLASA--TSFLWRPYKGRAYYWETAECVRRLMLAGLLVFIMPGSPGQSAVACMFAFFTAMVYEQVRPHQERMDKWLYTLGYGIVVCSMFTSLLMQVQWVEGNSEKA 299

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: D8LRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF6_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.060e-30
Identity = 81/227 (35.68%), Postives = 120/227 (52.86%), Query Frame = 1

Query: 3985 YSLTVTVFSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRV--------ASRGRSGRNAESLE--------------------------RPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYD--GYMLGILSI*FSTFFALAIKMELSGKKT 4557
            Y+      +F +YST ST++FQT++CD L +     VG SYLR DY I+CD+  H+A+ + A   +++YP+GIP  + V+LW+ R  +        A+R   G N    E                          R Y+      E+ EC  RLLLTG LVFILP S+GQ AV+C+ AVLT A++    P +D  D   Y LG L+I  + F  L ++++L+ ++T
Sbjct:   31 YTTVALTMAFFLYSTVSTVIFQTFSCDELED-----VGKSYLRADYGIDCDSDRHKAFKLYAGLMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAARVLHGSNPSQHEDERYGRPSEPDQRLSDRRIAQTAFLWRAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLVVRVDLADEET 252

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A835ZLE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.430e-30
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 1

Query: 4006 FSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRGRSGRNAES---LERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDG--YMLGILSI*FSTFFALAIKMELS 4545
            F+FL+++  S  VFQT+ACD L     M +  SYLR DYSIEC TP H AY I A   V++YP+GIPALY   LW+        GR+   A++   L  PY+      E+ ECL RL+LTG LVFI+PG+ GQ AV+C+FA  T  +Y    P  +R D   Y LG  SI F T+F L++ M++S
Sbjct:  795 FTFLIFAGVSVTVFQTFACDEL-----MYISKSYLRADYSIECYTPEHTAYRIFAGVMVLIYPIGIPALYMSTLWRCFGAHRDHGRTSELAKASSFLWEPYRAHAFHWEVVECLRRLMLTGLLVFIMPGTPGQSAVACVFAFFTGFVYESVRPHGERSDMWLYKLGY-SIIFVTYF-LSLLMQVS 972

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.200e-30
Identity = 86/195 (44.10%), Postives = 115/195 (58.97%), Query Frame = 1

Query: 4009 SFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRG--RSGRNAES------------LERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDG--YMLGILSI*FSTFFALAIKMELS 4545
            SFLVYST STIVFQT+ACD L EL     G ++LR DYS+EC TP H+ Y   A   +++YP+GIP LY  +L++ RHR+  +   R G + E             L + Y+      E+ EC  RLLLTG LVFILP S+GQ  V+C+ +V T AL+    P AD  D   Y+LG + I  S F +L  K+E++
Sbjct: 1372 SFLVYSTVSTIVFQTFACDTLDEL-----GTTFLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQALRDGVSPERRLVDKKIAHTVLLWQAYRPSRYYYEVIECARRLLLTGCLVFILPNSAGQAGVACVLSVATVALFITLRPFADSNDDRLYILGAILIFLSMFVSLVPKIEIA 1561

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 7.260e-30
Identity = 84/184 (45.65%), Postives = 108/184 (58.70%), Query Frame = 1

Query: 4006 FSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRGRSGRNAESLE------RPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDG--YMLGILSI*FSTFFALAIK 4533
            F+FL++S  ST VFQT+ACD L        G  YLR DY++ C T  H+AY I A+F V++YPVGIPALY  +L + R  +A     G  A SL+       PYK      EL EC  RLLL+GFLVFI PG+  Q AV+C  A++T  +YG   P  D  D   Y+LG + I FS F AL ++
Sbjct: 1033 FTFLIFSFASTTVFQTFACDCLDG-----TGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHEDGGVVAASLKPTKFLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALLVQ 1211

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 8.560e-30
Identity = 81/227 (35.68%), Postives = 120/227 (52.86%), Query Frame = 1

Query: 3985 YSLTVTVFSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRV--------ASRGRSGRNAESLE--------------------------RPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYD--GYMLGILSI*FSTFFALAIKMELSGKKT 4557
            Y+      +F +YST ST++FQT++CD L +L       SYLR DY+I+CD+  H+A+ + A F +++YP+GIP  + V+LW+ R  +        A+R   G N    E                          R Y+      E+ EC  RLLLTG LVFILP S+GQ AV+C+ AVLT A++    P +D  D   Y LG L+I  + F  L ++ +L+ ++T
Sbjct:  181 YTTVALTMAFFLYSTVSTVIFQTFSCDELEDL-----DKSYLRADYAIDCDSDRHKAFKLYAGFMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAARVLHGSNPSQHEDERYGRPSEPDQRLSDRRIAQTAFLWRAYRPAAYYYEVLECFRRLLLTGCLVFILPNSAGQAAVACVLAVLTVAVFAFVSPYSDPDDHRAYTLGALAIFLTMFMGLVVREDLADEET 402

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.600e-29
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 1

Query: 4006 FSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRGRSGRNAES---LERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDGYMLGI-LSI*FSTFFALAIKMELS 4545
            F+FL+++  S  VF+T+ACD L       VG+SYLR+DYSIEC TP H AY I A   ++ YP+GIPALY   LW         G++ + A++   L  PY+      E+ EC+ RL+LTG LVFI+PG+ GQ AV+C+FAV T   Y    P  D YD ++  I  SI F ++F L++ M++S
Sbjct:  448 FTFLIFAGVSVTVFETFACDEL-----QYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHGQTSQLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYF-LSLLMQVS 625

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A836CAP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP8_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.030e-29
Identity = 85/217 (39.17%), Postives = 122/217 (56.22%), Query Frame = 1

Query: 3916 FRDGAAAAAKEKAMAIELQTIGWYSLTVTVFSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWK-------DRHRVASRGRSGRNAESLERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDGYMLGILSI*FSTFFALAIKMELS 4545
            F D + +A  ++ +A +L  +        V ++LV+S+ S  VFQT++CDNL       +  SYLR DYSIEC TP H A+ I AA  + +YP+GIPA +  IL +        R   + + + G +   L  PYK      E+AEC+ RLLLTGFLVFI PG++ Q AV+CIFA +T  +Y    P     D  +  I +I   T FAL++ ME++
Sbjct:  819 FGDASRSATLQRIIAKDLNLV-------LVLAYLVFSSVSLKVFQTFSCDNLE-----YINKSYLRADYSIECYTPKHTAFRIYAAAMICVYPLGIPAFFAYILRRFMRKVQLQRQHSSGQQQLGTSCSFLLTPYKRRAMYWEVAECIRRLLLTGFLVFIKPGTATQSAVACIFACITAMMYLYIQPHRQMGDQRIYAIGAIIIFTTFALSLTMEIN 1023

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.760e-29
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 1

Query: 4006 FSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRGRSGRNAES---LERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDGYMLGI-LSI*FSTFFALAIKMELS 4545
            F+FL+++  S  VF+T+ACD L       VG+SYLR+DYSIEC TP H AY I A   ++ YP+GIPALY   LW         G++ + A++   L  PY+      E+ EC+ RL+LTG LVFI+PG+ GQ AV+C+FAV T   Y    P  D YD ++  I  SI F ++F L++ M++S
Sbjct: 1035 FTFLIFAGVSVTVFETFACDEL-----QYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHGQTSQLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYF-LSLLMQVS 1212

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BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Match: A0A835YZ05_9STRA (UCH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ05_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.960e-29
Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 1

Query: 4006 FSFLVYSTESTIVFQTYACDNLAELFFMQVGASYLRMDYSIECDTPTHQAYTILAAFTVVLYPVGIPALYGVILWKDRHRVASRGRSGRNAES---LERPYKHGWASLELAECLLRLLLTGFLVFILPGSSGQIAVSCIFAVLTQALYGVAGPRADRYDGYMLGI-LSI*FSTFFALAIKMELS 4545
            F+FL+++  S  VF+T+ACD L       VG+SYLR+DYSIEC TP H AY I A   ++ YP+GIPALY   LW         G++ + A++   L  PY+      E+ EC+ RL+LTG LVFI+PG+ GQ AV+C+FAV T   Y    P  D YD ++  I  SI F ++F L++ M++S
Sbjct:  696 FTFLIFAGVSVTVFETFACDEL-----QYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRDHGQTSQLAKASLFLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYF-LSLLMQVS 873

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1587.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YTX2_9STRA	9.850e-31	43.43	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
D8LRF6_ECTSI	1.060e-30	35.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZLE8_9STRA	2.430e-30	45.95	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LRF9_ECTSI	4.200e-30	44.10	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]
A0A835YUM0_9STRA	7.260e-30	45.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JU27_9PHAE	8.560e-30	35.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YVC3_9STRA	2.600e-29	44.02	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAP8_9STRA	3.030e-29	39.17	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CF41_9STRA	4.760e-29	44.02	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835YZ05_9STRA	4.960e-29	44.02	UCH domain-containing protein n=1 Tax=Tribonema mi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1587	contig	P-wetherbeei_contig1587:602..6929 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LHQ8
PFAMs	Beta_helix,Chlam_PMP
Model size	4853
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal peptide
Exons	6
Evalue	1.56e-07
EggNOG OGs	2BFIX@1\|root,2S176@2759\|Eukaryota
Cds size	474

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1587.2.1	prot_P-wetherbeei_contig1587.2.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig1587 4669..5142 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186069.848629-UTR-P-wetherbeei_contig1587:601..1837	1683186069.848629-UTR-P-wetherbeei_contig1587:601..1837	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 602..1837 +
1683186069.8596327-UTR-P-wetherbeei_contig1587:2092..4173	1683186069.8596327-UTR-P-wetherbeei_contig1587:2092..4173	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 2093..4173 +
1683186069.8717473-UTR-P-wetherbeei_contig1587:4582..4668	1683186069.8717473-UTR-P-wetherbeei_contig1587:4582..4668	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 4583..4668 +
1683186069.8873115-UTR-P-wetherbeei_contig1587:5142..5342	1683186069.8873115-UTR-P-wetherbeei_contig1587:5142..5342	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 5143..5342 +
1683186069.8948665-UTR-P-wetherbeei_contig1587:5563..5818	1683186069.8948665-UTR-P-wetherbeei_contig1587:5563..5818	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 5564..5818 +
1683186069.902599-UTR-P-wetherbeei_contig1587:6140..6283	1683186069.902599-UTR-P-wetherbeei_contig1587:6140..6283	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 6141..6283 +
1683186069.9105616-UTR-P-wetherbeei_contig1587:6551..6929	1683186069.9105616-UTR-P-wetherbeei_contig1587:6551..6929	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1587 6552..6929 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186069.8800387-CDS-P-wetherbeei_contig1587:4668..5142	1683186069.8800387-CDS-P-wetherbeei_contig1587:4668..5142	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig1587 4669..5142 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig1587:602..6929+
coding sequence from alignment at P-wetherbeei_contig1587:602..6929+

protein sequence of mRNA_P-wetherbeei_contig1587.2.1

>prot_P-wetherbeei_contig1587.2.1 ID=prot_P-wetherbeei_contig1587.2.1|Name=mRNA_P-wetherbeei_contig1587.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp
MVGAAVIAALIIALLAVMIGGTTGDAGAAAGDTLETSSSLLDLFLLLPWN
KLRTPAVAGQIITSLRAITGIWYPLLYRNFLAAASFLPLDLSWMLSAECW
IDGWNFYDRLLIVKLAPLALLLLLGARIALIVYQEPMPLLSPPGGWRAFP
GAADTSL*

mRNA from alignment at P-wetherbeei_contig1587:602..6929+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig1587.2.1 ID=mRNA_P-wetherbeei_contig1587.2.1|Name=mRNA_P-wetherbeei_contig1587.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=6328bp|location=Sequence derived from alignment at P-wetherbeei_contig1587:602..6929+ (Phaeothamnion wetherbeei SAG_119_79)
CGACGAAGGGCAATGCCGAATGTGGAAGCAAACCTGCCACAATGCACCCA
CCCGCAAACTGCACGTAATTTAAACGCAACATTTTTTATGGCCAGCTGGG
CAGCTCAAACAGTCAGCCTCAAGTCGCTCGGACGTACACAACGCACTCTG
CCCCAGGACTTGAGCAAGGGGCCAAGTCTTCGTGCAATACGGAAGCAAAA
GACATTAAGTTCGCGCGAAAGCGGATGCGAAGAGGCGGTCCTAAGTTGAC
GACGGAGGGCGGGTGGCGGCTGATCACAGAGCTGAAAAAAACTCGGACAA
AAAAAGGATCGGCAAAAAAGTTGAACCTCTCAGCTGATAGCTAGCGAACG
AAGAGATGTGCAAGCCCGGAAGCCGACCCGTCGGGCTGGCACGATCTGAC
AATGCCCAACCTCATCAAAGTCAGCCAACGCATCGCGCGACAGAAAGGAA
AGCAGTTGCTGCCCCAGGCTCTTCTTCGCCACGATTCCTGCCTCGCTTCA
TTAAGGACCTTCGCACTTCTCTGGTTGTCATTTCATCTGAGAAGTGGCGT
CGTAATGAAGTATTAGGTGATCCCTACATCTCCAACCGTGCGGAAATATC
GCGGCGCATTACCTCTTTCCCGCCACGAAAAAGGCGATTTTAGTATGTAT
TGGACGTCGGCAATGTACAGGGGAGCTGGGCCATCTTGAGGTGGGGCTGC
CGTCGTTGCTTGCAGTCTTTGCAGGGAGTAGAGAGCAAGGCCGTGAGGGG
CAAAATCGTTTTTGAAGAGAAGGCCGTCTGTCCGGTATCACCTCCGTTTT
CGCCGCCCTCTTATTAGCACCTTGTGATATGCTGTCTCAGTTCTCCTTGC
ATACAGCTCGATCCGGTATTTTCCGCCATGCATGCTCACGCCGCGGGCTG
CCCACGGCTGTCCCCTGCCGGGCGCTCTCTTTTTCCCCCATTCCCTCTGG
CCCCGCTTCTTGTCTTTCTTCGAGGACGGACCTCGCCGGTAGGCCGCAGC
TGGTGCCGACGCGCTATTTGCCATACTTCCACTTCGACGCCAAGACGGCT
ACGCACATGAATCCGAAATGCCTTGCGGAGCCCATCCCGTGGATATCGGC
ACCGCCGCCGGCGCGACGATGGCGGTTCAGATGCTCAAAATAACCTTTTA
TGCGCCCCCCTCGCGACGCTTTCTGGCAATAAGTTCGGCTGGCCGGTGGA
GGGCGAAGATGTTGCAAATCGACTACTACTACCCTGGTGACGTTCTTGCT
CCTCCGTTTCTTCCGCAAGAGGACTGTGTCGACCTGTGTTCTCAAGTTTC
TTTTTTTGTTTCCCCTTTATCATTGTACAGCACTCTTTTGAGCTTGCGTC
TCTTACGAACCTTACCGTCATGAAGCATTCCAAATGAAAGAAAAGAGTTG
CTTTTTAATTCTCCATACGAGCCCCCACCCTCTTTGCCCATTTTCTTTTC
CTGCATTCCACATTGTTGGAACGGCTACGGCCATTATTCAGGCCACCTGG
AACTCGTCTACTCGGTGAACTCAACGGGCGGCGTCTGCCCGCCGATGCAC
CCGCACCGTCTGCATCGCTCTCATGTTGGCGTTGTGGTCTTTGTTTTGGC
TGGCGGAGTGCTCTGAGTGGCGGCGACCGTTTTCGGACGGCGGCGAGCGG
CGGCGGGCGATTCGGCGGCTGGCGGGAGCCGAATGGCTTGCTTTCCTGCA
GGAGGTGACGGCCTTCTTTCAGCTGCTGCGCCCGACGCGTCTTGCACTTT
GATCGGCACACCTTTGTCCGCGCGAAAAAAATCGCGATTCGATTACAGTT
CTCCATGCCGCATTGACTTTGGGCGCCCCTTTGAACGCGGCTAACTCCTT
CTGCTTTCTGGCTTTACACCTCCGTTACGACACACCGCTGCAGCCACAAC
CTGGTCCCGATCACGAGCTGGACAAACGGCAGGGCGCCTTTCCGCCTCGC
TTCTAGCGCCATGAACACTGCGCACGCCGACGCGAATCCCGGCGGAGGGT
TTTTGAGTGCGGATACATTTTGAGGACCAGTTACCTGTCTCCAGGAACTT
TTTCGAGTTCTGATGCCAGTCCTCGGCAGTTCACTGCGTCTTTCGGCCGC
ACAGCTTTCGGAAAGGTTAATTGGTTTCAGCAGCTTCTTTTCAAAAAGAG
TAACAGCCGATCGCCCCCCTCCGTATATTCTCCCTCTCTGCATTTCTTGA
CGTTGCTTCTGCCGCTCCCGCCACAGCCCGCTGCCGCCGCTAATGGCTGC
CGCTACAAATCTCGCCGCTTAACATGCATGCCAAAGGATTCTGCAAACAT
ACACAGCAGGAGGGGAGATTCCATCGCTCGTACCTGACCGCGTTGAAGTT
AACAAAAGAAAAGATTATGGCGAAGACGCCGAAGAGAAGGCACCAGAGTA
ATTCCCAGCGACTCCAAGTTTTCGAGTCCGCGATAAAAACGCCCCAAACG
CCGATTTTGCCCCCAAATTTCGTGCGTTTTGGGAGGGTATTGGTTCAGCC
TGCTTCTGCTGATTCCTCGAGGAAAGTGGGGAAACAGATTATTTAGATGT
GTGCTCGGTTGAATTGGACGGAGCTAACCAATGACCGCACGGCGAATTTT
TGAGACTGAGTCACAGAGCTATAACAGTGTTAGGGTTAGGGTTAGGGATA
CGAACCCTTTCATTTCCCAATCCTTCCTCCTGGCAAGCATATCTTTGTCG
CCCTCGTTTCCCACTCCTCCCTCCTGGACGGGCACCATCTCCGTCGCCTT
CATGTCCAACTCCACCGTCGAAAGCAACCGTGCGCCGTACTGCCGGTTTG
CTTACTCGTCCGGATACCTGGAGCTGGAGCTGACGACCCTCATCGGGAAC
AGAGCGGACAGCAACGGAGGAGCTCTGTATCTCGGACGCCGAGGAACCTT
TGTCGCCCGCAGCGGCGTCGTTTTTCAAGAAAACGTGGTGTCGGTCTTCG
GCGCCGCAATCTGTGCCGAACCGGATACAAGCATCAGCTTGCTGGAGGAT
ACAATGTTCGTCGCCAACGCGGCGTCTCAATGGGGCGGGGCTCTGGCGAC
GTCGGGCTGCTGTCGTGTCGATATTAGAGGGCGCATCATGAAAGAGAACA
CCGCGGCCTACGGCGGGGCCATTTTTTTGGCGCCGCCGGCCGGCTCCTTC
ATGGCTCTTGACCTGACACTGAGCCGGAACGACGCTCTGCACGGCGGCAG
CATTTACAGCGAGGCGTCTGGCATGATGATGACGGACTGCAATTCGACTC
TAATGACGCGATGGTCTCCAGAGCAGCCATGTTCCTGCTTGGAGCGCCCG
TTGATTCCGACAACGTTACCCGCCTAACCTTCTCCAACAGCACGGCGGCG
TGCTGCTTTCCGACCAGCTGGGACTGGGAGTGGGGCTGCAACTACATCGA
CGGCACAGAAGACTTGGCCTGGGATCCATGCTGCATTGCCGCCGAGTACA
CCGACTGCGAGAAGTGCATCGGCTGCGACCCTGATCGCTTTGACTGCGAC
TCCCTGGGCCTGGTGGTGGCGTCGCTGCCACTAGCACCCGGCGTCTGGCA
CGTAGGCCTCGACACATTGAAGGTGCGCGAGTGCTGGGCGTCTGAGGCGT
GCGCCGGCGGGGCGGCAGTCGCTGATCCCGATCAGTACTGCAGCGAGGGG
CACGAGGGGCCGTGTGAATTTGCGGTGTGAGATTTACAGTACCATTTAAT
GCAACCGTGAAGATTCGTCGTCGCTGGTCCCTGCCGGGGCGGGATCCCAA
TGGGTCTTTCTTTTCATTTCCTTCTCATCCCATGCTTGCTCTTTTCGCAG
TAAAGAAGAGAGGCGTGTGGTATGTTGAACGAGCAAGCTTCAATTGATTG
CACCTTGCAACTCCCAGCGATAGCATTTTGCTTTTTCGGAGCTCGTCAGA
CCATCGCGCCCTTTCTTGCTCTGCCTTGTCTGCTCAGCCGCTTTACTTCG
CATTGCCGTACTATTCTCCGCCTGCAAACAGATTGCGCGGTGTGCACCGC
CTGCTGGGCCCATTCCGCGGCTGCGTATGAGTGCGTCAAGTGCGGCAGCA
CTTCGAGCATCGGATTCATGGTTGGCGCCGCCGTGATCGCCGCTCTCATA
ATTGCCTTGCTGGCGGTCATGATCGGCGGCACGACCGGCGACGCCGGTGC
TGCCGCAGGCGACACCCTTGAAACTTCAAGTTCCCTCCTCGACCTTTTTC
TTCTTCTTCCATGGAACAAGCTTAGGACTCCCGCAGTCGCCGGCCAAATC
ATCACCTCATTGCGGGCTATTACTGGCATTTGGTACCCGTTGCTTTACCG
CAACTTTTTGGCTGCCGCCAGCTTCCTACCGCTCGACCTTTCCTGGATGC
TGTCGGCGGAGTGCTGGATTGACGGGTGGAATTTCTACGACCGTCTGCTC
ATTGTCAAGCTGGCACCGCTGGCCCTACTCCTGCTGCTCGGGGCGCGGAT
CGCCTTGATAGTGTACCAAGAGCCCATGCCATTGCTGAGCCCGCCCGGCG
GATGGAGAGCTTTCCCTGGAGCGGCAGACACATCGTTGTAGGCGAGGAGG
ACGGCGGCGGCAGTAATGGCGGCCGCGTGTTTCGCGACGGCGCGGCCGCG
GCAGCGAAAGAGAAGGCAATGGCAATCGAACTGCAGACGATCGGATGGTA
CAGCCTGACGGTGACCGTCTTTTCCTTTCTCGTGTACAGCACCGAGAGCA
CCATAGTCTTTCAGACGTACGCATGCGACAACTTGGCTGAGGTGCGCTTT
CCCAGAACAACGTGCTATTGCGGAGTGACGGCGATCCGTGAGTGTATGCC
TTCGGGCTGGTCAGCCCTTTCGAGCGGTCGAAGTTGCGAAACTGGCATTA
CGGGCAGGCAGACATACAGGCGCTGGGCGCCGCCGTGCCAGTTGGCGTAA
GTCTCCTTCTAAACATTTCACACCGCATATCTTTTTCCCCGATTCCCCCA
CGGCCCCGCTAGCTCTTTTTCATGCAGGTGGGTGCCAGCTACCTGCGCAT
GGACTATAGCATCGAGTGCGACACGCCCACGCACCAGGCATACACGATAC
TTGCAGCCTTTACGGTGGTTTTGTATCCGGTGGGCATCCCGGCCCTTTAT
GGCGTCATTCTTTGGAAGGACCGCCACCGGGTCGCTTCCCGCGGCCGGTC
GGGTCGCAACGCGGAGTCCTTAGAACGCCCCTACAAGCATGGATGGGCGT
CGTTGGAGCTGGCGGAGGTGCGCTCGTCGTTTTAGAAACTCAGGGCACAT
GCCGCTCGCTCGGATTCCAATGTCCTTTCCCAAAACACATGATGCTGATT
GCATCCTTTTCTGAACAGCCTTTTTTTGAATGGCTGAAGCGGCAGCTGAT
CGAAACCTCCCTTCTCCTTCCATTTCAGCATGCTCCTCTCTTTTTTGCCA
TACTGTTCTGCGGGATAACGCTCGCGATTTGGCTCACTCGTTCGTTCTCT
TCGGCGACGAACCATTGCTGGCCCCCCACCCCCCCTTCCCCCGGGCACCA
TTCCTGCCTCGGTCGTGCCGCCTATTTGAGTGGTTGCAGTGTTTGCTGCG
GTTGCTGTTGACAGGCTTCCTAGTTTTCATACTACCTGGTTCTTCCGGGC
AGATTGCGGTCTCGTGCATCTTCGCCGTGCTCACCCAAGCATTATACGGG
GTCGCCGGGCCGCGTGCTGATCGCTACGACGGGTGAGTGCAAAATGCCTT
TACGGTCCAACTCGGTTCCTACATGCTTTGATAGCACTGTTTGTTCCTCG
AGGCCATTTATTGTTCATTCTTTCCGTGCTGTCGGCGGTGGTCGCGGCGT
TGGCAGTGAGGTCGCGATCTTAAAGGTTGGCTTCTTGAGCTTCCGTCACG
ACTGATTGCACTCTGCTTGGCTAGTTGCCGGTTGCGAGCCAACCCCACAC
ATTCTCCCTGTCTTGCGCTGACCTGCCTCGCCCAACTGCTCGGGCAAAAG
GTACATGCTGGGAATTCTGAGCATTTGATTCTCGACTTTCTTCGCGCTCG
CCATCAAGATGGAACTCTCCGGGAAAAAGACGGCCAAAGCCAGCAGGTGG
TGTCGGTGCTGCTGATCGCCCTGCAGGTGCTAATGGTGGCGGCTGCCTTT
GGCAACGGCACACTCATCTTTGCCCAGCGTGCCGCCGGCGCGAAGAAAGA
GACGGAGTGCGTCTGCCAGGTGGCGCGGAGCGAAGGCAAAAGCCTTCGGG
TTCGCAACGTTGGGCCTGGCGACGATGGTGTCTCCAGCGATGATGACCAC
TCCGGCGGCACCAGCATGCCCGGCGGCGTTGACAGATCCGACGGCGACAG
CGGGCCCGGCGGCGACGGCGGATCCGCC

Coding sequence (CDS) from alignment at P-wetherbeei_contig1587:602..6929+

>mRNA_P-wetherbeei_contig1587.2.1 ID=mRNA_P-wetherbeei_contig1587.2.1|Name=mRNA_P-wetherbeei_contig1587.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig1587:602..6929+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTGGCGCCGCCGTGATCGCCGCTCTCATAATTGCCTTGCTGGCGGT
CATGATCGGCGGCACGACCGGCGACGCCGGTGCTGCCGCAGGCGACACCC
TTGAAACTTCAAGTTCCCTCCTCGACCTTTTTCTTCTTCTTCCATGGAAC
AAGCTTAGGACTCCCGCAGTCGCCGGCCAAATCATCACCTCATTGCGGGC
TATTACTGGCATTTGGTACCCGTTGCTTTACCGCAACTTTTTGGCTGCCG
CCAGCTTCCTACCGCTCGACCTTTCCTGGATGCTGTCGGCGGAGTGCTGG
ATTGACGGGTGGAATTTCTACGACCGTCTGCTCATTGTCAAGCTGGCACC
GCTGGCCCTACTCCTGCTGCTCGGGGCGCGGATCGCCTTGATAGTGTACC
AAGAGCCCATGCCATTGCTGAGCCCGCCCGGCGGATGGAGAGCTTTCCCT
GGAGCGGCAGACACATCGTTGTAG