mRNA_P-wetherbeei_contig15842.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A7S2UX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX35_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.720e-24 Identity = 66/203 (32.51%), Postives = 106/203 (52.22%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKSNLYEGFEDIFWPGKTAS------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETSATAAAVTPPRRLRYFVSLVNESIIKRGIFWRLRKLHKAAVLLWAGAGVLSRRARHRARAILLREMNGGGLVLFNEV 591
E + N R L++V+G+ IKPGR+ RTGF S AT+ DV+ L+++G++T++DLRS E+ D+ + +++E F+ + W + KE T A R YF+SL+NES+ K+G+ RL KAA +++ V+S RA RAR+++L+++N GGL L NE+
Sbjct: 66 ENVKNCRDLANVKGSPIKPGRVLRTGFLSNATSKDVKNLLEKLGLKTVIDLRSPREID-DDKHEGSIFESFQSVDWTEDQQRRKWERRSKRSRAKYLVQRAAMELQGKAAAWNYRKKMSEKREKEREETMRAKASQR---YFISLMNESLYKKGVISRLGNRQKAAAVMYLAGAVVSTRAYKRARSLVLKKVNEGGLGLLNEL 264
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.080e-22 Identity = 76/200 (38.00%), Postives = 97/200 (48.50%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKSNLYEGFEDIFW---PGKTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETSATAAAVTPPRRLRYFVSLVNESIIKRGIFWRLRKLHKAAVLLWAGAGVLSRRARHRARAILLREMNGGGLVLFNEV 591
E + N+R LSSV+G I GR++RTG S AT D + VDLRS EL DE + ++YEGF ++ G S XXXX YFVSL++ESI K+G+F RLR+ HKAAVL A A ++SRR +AR I LRE+N GGLVL NE+
Sbjct: 209 EGVQNIRDLSSVEGYGIVAGRVFRTGHLSAATERDAKTXXXXXXXXXXVDLRSATELGHDELIHGDVYEGFVNVGGGDHSGTGVSQGPAWDEAIQGESNDALPVQGKVGGASAGAGXXXXXXXXXXXXXXXXXXXXXYFVSLIDESIYKKGVFQRLRRRHKAAVLALAPATMVSRRCTQKARGIFLREINAGGLVLLNEL 408
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A836CH30_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH30_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.470e-16 Identity = 59/197 (29.95%), Postives = 98/197 (49.75%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKSNLYEGFEDIFWPGKTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETSATAAAVTPPRRLRYFVSLVNESIIKRGIFWRLRKLHKAAVLLWAGAGVLSRRARHRARAILLREMNGGGLVLFNEV 591
E++ N R +++ +KPGRL+RTGFPS++T +D++L+ I I T++DLRS +EL MD + S +Y +E + +++ + E TA TP ++ R+ +SL++E G+ + + KA ++ GA +SRRAR A +LL + GGL L NE+
Sbjct: 50 EKVRNFRDIATACPGLLKPGRLYRTGFPSESTPSDLKLW-SAIDISTLIDLRSPKELGMDTLMHSPVYAPYETVDLNQESSGSWRQAVLST---------------------------EVETTAEDFTPTKQ-RFLLSLIDERKYVSGLVLQAEIIDKAWLVALIGASAVSRRARAHATEVLLERIKAGGLPLLNEM 217
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A448ZIR0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.590e-13 Identity = 55/211 (26.07%), Postives = 92/211 (43.60%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKSNLYEGFEDIFW--PGKTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKET------------SATAAAVTPPRRLRYFVSLVNESIIKRGIFWRLRKLHKAAVLLWAGAGVLSRRARHRARAILLREMNGGGLVLFNEV 591
E + N R L+ ++I PGR++RTG A+ D +L +++GI T+VDLRS EL D++L + ++GF ++ W G+ E + A + R R+FVSL+NE RG ++RK A ++ A LS+R + + + E+N GGL++ N++
Sbjct: 100 ESVKNCRDLACTSSSSILPGRIFRTGRLGDASEKDRELLFKDLGISTLVDLRSPTELRDDDALMAECFDGFTNLVWIENGRRRDGCVRELAAGVSPVEKARKLRLSKKQLDASDDLAAEDEMCEVGCDDPLTLPAERALTKSKDRNERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDL 310
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A7S2I2F6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2F6_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 4.120e-10 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESL-KSNLYEGFEDIFW 228
++I N R +SSV + KPGR+ R G PS A+ +D+ L L+E+GI+T+VDLRS EL D +L + L+E F + W
Sbjct: 120 DEIKNARDISSVAHSPAKPGRVLRMGRPSDASPSDIDLLLEELGIKTLVDLRSPTELKDDPTLERKELFEDFVSLVW 196
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: B8BVJ2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVJ2_THAPS) HSP 1 Score: 68.2 bits (165), Expect = 5.110e-10 Identity = 69/225 (30.67%), Postives = 107/225 (47.56%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESL-KSNLYEGFEDIFW--PGK-------------------------TASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETSATAAAVTPPRRLRYFVSLVNESIIKRGIFWRLRKLHKAAVLLWAGAGVLSRRARHRARAILLREMNGGGLVLFNEV 591
E++ N R L+SV + I PG+++R G S AT D+ + +IG++T+VDLRS EL D +L + ++ F D+ + GK + + XXXXXXXXXXXX E +A R+ R+FVS++NE RG ++RK A ++ + ++S+ AR + L E+NGGGL + NE+
Sbjct: 54 EKVKNARDLASVCNSPILPGKVFRIGRVSDATEKDLDILFGQIGVKTLVDLRSPTELKDDPTLEREEVFGNFTDMVYYESGKLVKELGPEEKRMQRKRKRDRVREAVSGARKNTHDVVVGFVDNFFGGEEGXXXXXXXXXXXXIAAEKLLQDSARRRNRKERHFVSIMNEVKYVRGTLSKVRKRDIAKTIIKSPTAIISKTARENIKKPFLDEINGGGLPMLNEL 278
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: W7TPH7_9STRA (Tyrosine-protein phosphatase family, C-terminal domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPH7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.310e-9 Identity = 29/66 (43.94%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKSN 198
E++ N+R LSSV+G+ IK GR++RTG+ SKA+ D++ + +T++DLRS++EL MD+ + S+
Sbjct: 130 ERVKNIRDLSSVRGSGIKAGRIYRTGYLSKASEEDIKFIRETAKFKTLIDLRSEKELGMDDQMNSS 195
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A7S2XMM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMM4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.680e-8 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESLKS-NLYEGFEDIFW 228
E++ N R L+SV+ + IK GRL R G S A+ D+Q+ QE+G++T+VDLRS EL D +L++ +++ F W
Sbjct: 98 EKVKNARDLNSVKNSPIKAGRLIRLGRVSDASEVDIQILFQELGVKTLVDLRSPTELKDDPTLENPKVFDNFTSFVW 174
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A7S1Z3K4_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3K4_TRICV) HSP 1 Score: 56.6 bits (135), Expect = 4.860e-7 Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 1 EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFL----QEIGIRTMVDLRSDEELFMDESL-KSNLYEGFEDIFW 228
E++ N R L+S G+ ++PGRL+R G S ATA+D+ L G++T VDLRS EL D +L + ++ F I W
Sbjct: 42 EKVKNARDLASASGSPVRPGRLYRMGRVSDATASDLALLFGVGDDGTGVKTFVDLRSPTELRDDPTLERPEVFGNFTSIVW 122
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Match: A0A7S3Q2B1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2B1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.290e-5 Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 4 QISNVRCLSSV----QGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDLRSDEELFMDESL-KSNLYEGFEDIFW 228
+I N R L+S + I+P RL+RTG S AT D+ L E+GIRT+VDLRS EL D +L + ++ + ++ W
Sbjct: 85 KIKNARDLASAVNSNENNPIQPNRLFRTGRVSDATTEDIHLLHDELGIRTLVDLRSPTELKDDMTLDREEVFGDYTNLIW 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15842.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15842.1.1 >prot_P-wetherbeei_contig15842.1.1 ID=prot_P-wetherbeei_contig15842.1.1|Name=mRNA_P-wetherbeei_contig15842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp EQISNVRCLSSVQGAAIKPGRLWRTGFPSKATANDVQLFLQEIGIRTMVDback to top mRNA from alignment at P-wetherbeei_contig15842:641..1480+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15842.1.1 ID=mRNA_P-wetherbeei_contig15842.1.1|Name=mRNA_P-wetherbeei_contig15842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig15842:641..1480+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15842:641..1480+ >mRNA_P-wetherbeei_contig15842.1.1 ID=mRNA_P-wetherbeei_contig15842.1.1|Name=mRNA_P-wetherbeei_contig15842.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig15842:641..1480+ (Phaeothamnion wetherbeei SAG_119_79)back to top |