mRNA_P-wetherbeei_contig15762.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15762.2.1
Unique NamemRNA_P-wetherbeei_contig15762.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A127EPP7_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EPP7_9HYPH)

HSP 1 Score: 109 bits (272), Expect = 5.200e-30
Identity = 55/68 (80.88%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            MK ++EG+L+TQLA+LRQEHRDLD AIEAL+N+PG+DLLQVQRLKKRKL LRD+II IEDQLTPDIIA
Sbjct:    1 MKQDDEGELRTQLAQLRQEHRDLDAAIEALYNSPGADLLQVQRLKKRKLQLRDQIILIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A537LDC0_9PROT (DUF465 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537LDC0_9PROT)

HSP 1 Score: 102 bits (254), Expect = 2.900e-27
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 1 
Query:   10 EEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            EEEG+L+ QLARL QEHRDLD AI AL  APGSD+LQ+QRLKKRKLVLRDRI  IEDQLTPDIIA
Sbjct:    4 EEEGELRAQLARLLQEHRDLDAAIGALQGAPGSDILQIQRLKKRKLVLRDRITFIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A6N7GN29_9HYPH (DUF465 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GN29_9HYPH)

HSP 1 Score: 102 bits (253), Expect = 4.120e-27
Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M  EEE DL+ QLARL QEHRDLD AIEAL +APGSDLLQVQRLKKRKL LRDRI  IEDQLTPDIIA
Sbjct:    1 MTPEEEQDLREQLARLLQEHRDLDSAIEALQDAPGSDLLQVQRLKKRKLYLRDRISFIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A327JYJ8_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327JYJ8_9HYPH)

HSP 1 Score: 100 bits (250), Expect = 1.180e-26
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M ++ E DLK QLARL+QEHRDLDVAI AL +APGSD+LQVQRLKKRKL LRDRI  IEDQ+TPDIIA
Sbjct:    1 MANDNEADLKAQLARLQQEHRDLDVAISALQDAPGSDVLQVQRLKKRKLWLRDRISFIEDQITPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A537TG40_9PROT (DUF465 domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TG40_9PROT)

HSP 1 Score: 100 bits (249), Expect = 1.680e-26
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 1 
Query:   10 EEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            +EE +L+ QLARL+QEHRDLD AI AL ++PGSDLLQVQRLKKRKLVLRDRI  IEDQLTPDIIA
Sbjct:    4 DEERELREQLARLQQEHRDLDTAISALQHSPGSDLLQVQRLKKRKLVLRDRISYIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A363TQT3_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TQT3_9BRAD)

HSP 1 Score: 100 bits (249), Expect = 1.680e-26
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M  EEE +L+  LAR++QEHRDLD AIEAL NAPGSD+LQ+QRLKKRKL LRDR+  IEDQLTPDIIA
Sbjct:    1 MTQEEERELRATLARMQQEHRDLDAAIEALQNAPGSDILQIQRLKKRKLALRDRMTFIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A6L5FNX5_9HYPH (DUF465 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FNX5_9HYPH)

HSP 1 Score: 100 bits (249), Expect = 1.680e-26
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M  EEEG+L+ QLARL+QEHRDLD AI AL  APG+DLLQVQRLKKRKL LRDRI  IEDQLTPDIIA
Sbjct:    1 MTKEEEGELRAQLARLQQEHRDLDSAIAALQEAPGADLLQVQRLKKRKLHLRDRISFIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: A0A346A4U7_9HYPH (DUF465 domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A4U7_9HYPH)

HSP 1 Score: 99.4 bits (246), Expect = 4.820e-26
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M +EEEG L+TQLARL+QEHRDLD AI AL  +P SDLLQVQRLKKRKLVLRD I  IEDQLTPDIIA
Sbjct:    1 MTEEEEGALRTQLARLQQEHRDLDAAIAALAASPASDLLQVQRLKKRKLVLRDSIRLIEDQLTPDIIA 68
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: UPI001821EF4F (DUF465 domain-containing protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI001821EF4F)

HSP 1 Score: 98.6 bits (244), Expect = 9.480e-26
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 1 
Query:   10 EEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            E E DL  QLARLRQEHRDLDVAI AL +APGSD+LQVQRLKKRKL L+DRI  IEDQ+TPDIIA
Sbjct:    3 ENEADLTGQLARLRQEHRDLDVAISALQDAPGSDILQVQRLKKRKLWLKDRISFIEDQMTPDIIA 67
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BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Match: Q2J051_RHOP2 (Uncharacterized protein n=16 Tax=Bradyrhizobiaceae TaxID=41294 RepID=Q2J051_RHOP2)

HSP 1 Score: 98.6 bits (244), Expect = 9.740e-26
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 1 
Query:    1 MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLVLRDRIIQIEDQLTPDIIA 204
            M DE+EG+L  +LA+L+QEHRDLD AIEALH++P  DLL++QRLKKRKL LRDRI  IEDQ+TPDIIA
Sbjct:    1 MTDEDEGELGAELAKLQQEHRDLDAAIEALHHSPAPDLLRLQRLKKRKLALRDRIAFIEDQITPDIIA 68
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15762.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EPP7_9HYPH5.200e-3080.88Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2... [more]
A0A537LDC0_9PROT2.900e-2781.54DUF465 domain-containing protein n=1 Tax=Alphaprot... [more]
A0A6N7GN29_9HYPH4.120e-2782.35DUF465 domain-containing protein n=1 Tax=Hyphomicr... [more]
A0A327JYJ8_9HYPH1.180e-2677.94Uncharacterized protein n=1 Tax=Rhodoplanes piscin... [more]
A0A537TG40_9PROT1.680e-2680.00DUF465 domain-containing protein n=4 Tax=Alphaprot... [more]
A0A363TQT3_9BRAD1.680e-2675.00Uncharacterized protein n=1 Tax=Bradyrhizobiaceae ... [more]
A0A6L5FNX5_9HYPH1.680e-2679.41DUF465 domain-containing protein n=1 Tax=Hyphomicr... [more]
A0A346A4U7_9HYPH4.820e-2679.41DUF465 domain-containing protein n=1 Tax=Pseudolab... [more]
UPI001821EF4F9.480e-2680.00DUF465 domain-containing protein n=1 Tax=Rhodoplan... [more]
Q2J051_RHOP29.740e-2672.06Uncharacterized protein n=16 Tax=Bradyrhizobiaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15762contigP-wetherbeei_contig15762:1320..1526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog652103.Rpdx1_4383
Preferred nameMA20_03740
PFAMsDUF465
Model size207
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.11e-27
EggNOG OGsCOG5481@1|root,COG5481@2|Bacteria,1NG9U@1224|Proteobacteria,2UFXJ@28211|Alphaproteobacteria,3K07E@41294|Bradyrhizobiaceae
DescriptionProtein of unknown function (DUF465)
Cds size207
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186066.6672873-CDS-P-wetherbeei_contig15762:1319..15261683186066.6672873-CDS-P-wetherbeei_contig15762:1319..1526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15762 1320..1526 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15762.2.1prot_P-wetherbeei_contig15762.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15762 1320..1526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15762.2.1

>prot_P-wetherbeei_contig15762.2.1 ID=prot_P-wetherbeei_contig15762.2.1|Name=mRNA_P-wetherbeei_contig15762.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp
MKDEEEGDLKTQLARLRQEHRDLDVAIEALHNAPGSDLLQVQRLKKRKLV
LRDRIIQIEDQLTPDIIA*
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mRNA from alignment at P-wetherbeei_contig15762:1320..1526-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15762.2.1 ID=mRNA_P-wetherbeei_contig15762.2.1|Name=mRNA_P-wetherbeei_contig15762.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig15762:1320..1526- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGACGAGGAAGAAGGCGACCTCAAAACTCAACTGGCGCGGTTGCG
GCAGGAGCATCGCGACCTGGATGTTGCCATTGAGGCACTGCACAACGCGC
CGGGATCGGATCTGTTGCAGGTCCAGCGATTGAAGAAGCGCAAGCTCGTG
CTGCGCGATCGCATCATCCAGATCGAAGACCAACTCACCCCCGACATCAT
TGCTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15762:1320..1526-

>mRNA_P-wetherbeei_contig15762.2.1 ID=mRNA_P-wetherbeei_contig15762.2.1|Name=mRNA_P-wetherbeei_contig15762.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig15762:1320..1526- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGACGAGGAAGAAGGCGACCTCAAAACTCAACTGGCGCGGTTGCG
GCAGGAGCATCGCGACCTGGATGTTGCCATTGAGGCACTGCACAACGCGC
CGGGATCGGATCTGTTGCAGGTCCAGCGATTGAAGAAGCGCAAGCTCGTG
CTGCGCGATCGCATCATCCAGATCGAAGACCAACTCACCCCCGACATCAT
TGCTTGA
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