mRNA_P-wetherbeei_contig15748.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15748.1.1
Unique NamemRNA_P-wetherbeei_contig15748.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: D8LHF5_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.030e-44
Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = 1
Query:  430 VVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKFRSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLCE 765
            +++YVR+I+G N+VLTGHSLGGGLARIV ALE+  S+CFSPPGIAQSYRKF  G  A+DR  LH  SVS+IPE+DF+PMIDTQVGLIQ I+C T+ K LQ SCHMLEGT+C+
Sbjct:  823 LLEYVRAIEGRNVVLTGHSLGGGLARIVGALEKATSICFSPPGIAQSYRKFSVGAGALDRALLHQMSVSIIPEYDFVPMIDTQVGLIQLISCDTAGKALQLSCHMLEGTICD 934          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A7S3XTY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY2_HETAK)

HSP 1 Score: 142 bits (359), Expect = 4.900e-37
Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKFR--SGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLCE 765
            QV +YVRS+KG  +VLTGHSLGGGLARI  ALE   SV FSPPG+ Q++RKFR  +GP  + R  L+H SV+V+PE+D +  +DTQVG IQ I C + S  L N+CHMLEGTLCE
Sbjct:  170 QVTEYVRSLKGRQVVLTGHSLGGGLARIAGALEGAPSVTFSPPGLGQNFRKFRPQTGPGGLTRGDLYHGSVAVVPENDPVARVDTQVGNIQHIMCKSESLALTNACHMLEGTLCE 284          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A7S1XLU3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.400e-31
Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 1
Query:  424 EQVVDYVRSI--KGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKFRSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLCE 765
            E+++DY+R    +G  +VLTGHSLGGGLAR+V  +    SV FSPPGI  S+RK+  G L  DR  LH+++V+++PEHD +  IDTQVGL Q +TC  +S++L   CHMLEGT CE
Sbjct:  264 ERLLDYMRERVGRGERVVLTGHSLGGGLARLVGTIVGLPSVAFSPPGIGSSHRKY--GTLLADRGQLHNANVAIVPEHDIVTRIDTQVGLQQVVTCEAASQLLSIPCHMLEGTTCE 377          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A3M6VSC6_9STRA (Lipase_3 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSC6_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.270e-29
Identity = 61/117 (52.14%), Postives = 81/117 (69.23%), Query Frame = 1
Query:  424 EQVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKF----RSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            ++++DYV S+    +VLTGHS+GGG+AR+V ++  T SV FSPPGI QSY K         + VDR  LHH +V+V+PE+D I MID Q G+IQ I+C T    +Q SCHMLEGT+C
Sbjct:  737 QELLDYVTSLTDRKVVLTGHSMGGGIARLVGSIVGTTSVTFSPPGIVQSYSKLVHHIGGTSMKVDRASLHHRNVAVVPEYDPITMIDAQAGMIQKISCDTPHLSMQLSCHMLEGTIC 853          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A662WTE9_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTE9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.430e-29
Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKF----RSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            +++DYV S+K   +VLTGHS+GGG+AR+V ++  T SV FSPPG  QSY K         + VDR  LHH S +VIPE+D I MID Q G+ Q I+C T    +Q SCHMLEGTLC
Sbjct:  247 ELLDYVTSLKDRKVVLTGHSMGGGIARLVGSIVGTPSVTFSPPGFVQSYSKLIHHIGGTSMKVDRATLHHHSFAVIPEYDPITMIDAQAGMTQKISCDTPHLSMQLSCHMLEGTLC 362          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A6A3GSJ1_9STRA (Lipase_3 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GSJ1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.820e-29
Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKF----RSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            +++DYV S+    +VLTGHS+GGG+AR+V ++  T SV FSPPG  QSY K         + VDR  LHH S +V+PE+D I MID Q G+IQ I+C T    +Q SCHMLEGTLC
Sbjct:  335 ELLDYVTSLSDRKVVLTGHSMGGGIARLVGSIVGTTSVTFSPPGFVQSYSKLVHHIGGTSMKVDRASLHHRSFAVVPEYDPITMIDAQAGMIQKISCDTPHLSMQLSCHMLEGTLC 450          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A662YFA1_9STRA (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFA1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.990e-29
Identity = 62/116 (53.45%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKF----RSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            +++DYV S+K   +VLTGHS+GGG+AR+V ++  T SV FSPPG  QSY K         + VDR  LHH S +VIPE+D I MID Q G+ Q I+C T    +Q SCHMLEGTLC
Sbjct:  394 ELLDYVTSLKDRKVVLTGHSMGGGIARLVGSIVGTPSVTFSPPGFVQSYSKLIHHIGGTSMKVDRATLHHHSFAVIPEYDPITMIDAQAGMTQKISCDTPHLSMQLSCHMLEGTLC 509          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A6A5ACD0_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACD0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.250e-28
Identity = 58/116 (50.00%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKF----RSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            +++ YV+SI   N++LTGHSLGG +AR+V ++    SV FSPPG  Q+Y K         + VDR  LHH    V+PE+D + MIDTQ GLIQ ITC T    +Q SCHM++GTLC
Sbjct:   51 ELLQYVKSIHDRNVILTGHSLGGAIARVVGSVLGKPSVSFSPPGSGQTYSKLVHDIAGQDMQVDRSRLHHECTCVLPEYDPVTMIDTQSGLIQRITCDTPHLSMQLSCHMIQGTLC 166          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: F0VYR6_9STRA (Transmembrane protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYR6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.660e-28
Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRK----FRSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            ++V+Y  SIK  N++LTGHS+GG +ARIVA++ +  SV FSPPG+ QSY K    F      V+R  LH  +++VIPE+D I +ID Q GLIQ I+C+T    +Q SCHMLEGTLC
Sbjct:  666 ELVEYTNSIKDRNVILTGHSMGGAIARIVASILKKQSVTFSPPGLIQSYSKLVHTFGGQKYKVERSKLHQYNIAVIPEYDPITLIDVQAGLIQKISCATPHLSMQLSCHMLEGTLC 781          
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Match: A0A024GSX6_9STRA (Lipase_3 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GSX6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.640e-28
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 1
Query:  427 QVVDYVRSIKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRK----FRSGPLAVDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLEGTLC 762
            ++V+Y  SIK  N++LTGHS+GG +ARIVA++    S+ FSPPG  QSY K    F      V+R  LH  +++VIPE+D I +ID QVGLIQ I+C+T    +Q SCHMLEGTLC
Sbjct:  689 ELVEYTNSIKDRNVILTGHSMGGAIARIVASILGKQSITFSPPGFVQSYSKLVHTFGGREYKVERSTLHQFNIAVIPEYDPITLIDVQVGLIQKISCATPHLSMQLSCHMLEGTLC 804          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15748.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHF5_ECTSI1.030e-4470.54Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S3XTY2_HETAK4.900e-3760.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XLU3_9STRA4.400e-3153.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A3M6VSC6_9STRA3.270e-2952.14Lipase_3 domain-containing protein n=1 Tax=Peronos... [more]
A0A662WTE9_9STRA3.430e-2953.45Lipase_3 domain-containing protein n=1 Tax=Nothoph... [more]
A0A6A3GSJ1_9STRA4.820e-2952.59Lipase_3 domain-containing protein n=1 Tax=Phytoph... [more]
A0A662YFA1_9STRA6.990e-2953.45Lipase_3 domain-containing protein (Fragment) n=1 ... [more]
A0A6A5ACD0_9STRA1.250e-2850.00Lipase_3 domain-containing protein n=1 Tax=Aphanom... [more]
F0VYR6_9STRA2.660e-2852.59Transmembrane protein putative n=1 Tax=Albugo laib... [more]
A0A024GSX6_9STRA3.640e-2852.59Lipase_3 domain-containing protein n=2 Tax=Albugo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15748contigP-wetherbeei_contig15748:1..1104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LHF5
PFAMsLipase_3
Model size777
Max annot lvl2759|Eukaryota
KEGG rclassRC00020,RC00037,RC00041,RC00094
KEGG koko:K17900
KEGG ReactionR02250,R02687
KEGG Pathwayko00561,ko01100,ko04138,map00561,map01100,map04138
KEGG ModuleM00098
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.69e-45
EggNOG OGs2DUDU@1|root,2QVZS@2759|Eukaryota
EC3.1.1.3
DescriptionLipase (class 3)
Cds size777
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko03029,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186065.9813097-CDS-P-wetherbeei_contig15748:0..991683186065.9813097-CDS-P-wetherbeei_contig15748:0..99Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15748 1..99 -
1683186065.9956272-CDS-P-wetherbeei_contig15748:426..11041683186065.9956272-CDS-P-wetherbeei_contig15748:426..1104Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15748 427..1104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15748.1.1prot_P-wetherbeei_contig15748.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15748 1..1104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15748.1.1

>prot_P-wetherbeei_contig15748.1.1 ID=prot_P-wetherbeei_contig15748.1.1|Name=mRNA_P-wetherbeei_contig15748.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp
LQLFGLQKQADYYHPVRAIVSGEKHLVFTVVQNFCEAVWIGGSVFHLGCG
TNSHACLCPPGLHLPLPRGRNLLQSARTLMFTPHLTLPFRFYSTPLINQP
SMSATKQTLELASHFTLLSLPPRLPSATNHPPPMPNITDRKEQVVDYVRS
IKGSNIVLTGHSLGGGLARIVAALERTASVCFSPPGIAQSYRKFRSGPLA
VDRDFLHHSSVSVIPEHDFIPMIDTQVGLIQTITCSTSSKVLQNSCHMLE
GTLCEFFIS
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mRNA from alignment at P-wetherbeei_contig15748:1..1104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15748.1.1 ID=mRNA_P-wetherbeei_contig15748.1.1|Name=mRNA_P-wetherbeei_contig15748.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig15748:1..1104- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAACTCTTTGGACTGCAGAAACAAGCCGACTATTACCACCCGGTGCG CGCGATTGTGTCTGGGGAAAAGCATCTTGTCTTCACCGTGGTCCAAAACT TCTGCGAAGCAGTCTGGATCGGCGGCTCTGTCTTCCATCTGGGATGCGGG ACGAACAGTCACGCTTGCCTGTGCCCCCCCGGGCTGCATTTGCCACTGCC GAGGGGAAGAAACCTCCTACAATCTGCCAGAACGTTGATGTTCACACCTC ATCTAACTCTTCCCTTCCGGTTTTACTCCACCCCTCTCATCAACCAACCG TCAATGTCTGCAACAAAACAAACGTTGGAGCTCGCATCCCATTTTACTCT TCTTTCCTTGCCGCCCCGCCTTCCCTCTGCTACCAACCATCCTCCGCCGA TGCCAAACATAACGGATCGGAAAGAGCAGGTGGTGGACTATGTGCGGAGC ATCAAGGGCAGCAACATCGTGCTGACGGGCCACTCGCTCGGCGGCGGCCT CGCCCGCATAGTGGCGGCGCTCGAGCGCACAGCCAGCGTGTGCTTCAGCC CGCCGGGCATCGCGCAGAGCTACCGCAAGTTCCGGTCGGGCCCGCTGGCG GTAGACCGCGACTTTCTGCACCACAGCAGCGTCTCGGTCATTCCCGAGCA CGATTTCATCCCCATGATTGACACGCAGGTGAGGGGCAGTTGGAGCGGTG ACAATGGGGATGGAGAAGGAGCGGAGGAGACCTTGCTTTATCATTTCTTT GGTTTGTTGGAAAGCTTGTAATGCCACTTCCACTTTTGCGGCTTAGTTAA TCCCGAGGGGTTGGGCTAGACGGACCTTTCTGAGGCTGGTCGGGAACATG TTGCAGCGGCCTCACTTCCGGCATCCTTCCCTTCTTTCTTCAGGGGCACT GCTCGCTCCGGCCGAAAAAACAAGGCGTCTTTCTCTAGGGGCCTTCTCTT TTCCTCGTAACCCCATTTGCCTTACATAATGCTTCCTACTTTGGCCTGAA TGCAGGTGGGGCTCATTCAGACCATCACGTGCAGCACATCGTCGAAGGTA CTGCAGAACTCGTGCCACATGCTGGAAGGCACCCTCTGTGAGTTTTTCAT CAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15748:1..1104-

>mRNA_P-wetherbeei_contig15748.1.1 ID=mRNA_P-wetherbeei_contig15748.1.1|Name=mRNA_P-wetherbeei_contig15748.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig15748:1..1104- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAACTCTTTGGACTGCAGAAACAAGCCGACTATTACCACCCGGTGCG
CGCGATTGTGTCTGGGGAAAAGCATCTTGTCTTCACCGTGGTCCAAAACT
TCTGCGAAGCAGTCTGGATCGGCGGCTCTGTCTTCCATCTGGGATGCGGG
ACGAACAGTCACGCTTGCCTGTGCCCCCCCGGGCTGCATTTGCCACTGCC
GAGGGGAAGAAACCTCCTACAATCTGCCAGAACGTTGATGTTCACACCTC
ATCTAACTCTTCCCTTCCGGTTTTACTCCACCCCTCTCATCAACCAACCG
TCAATGTCTGCAACAAAACAAACGTTGGAGCTCGCATCCCATTTTACTCT
TCTTTCCTTGCCGCCCCGCCTTCCCTCTGCTACCAACCATCCTCCGCCGA
TGCCAAACATAACGGATCGGAAAGAGCAGGTGGTGGACTATGTGCGGAGC
ATCAAGGGCAGCAACATCGTGCTGACGGGCCACTCGCTCGGCGGCGGCCT
CGCCCGCATAGTGGCGGCGCTCGAGCGCACAGCCAGCGTGTGCTTCAGCC
CGCCGGGCATCGCGCAGAGCTACCGCAAGTTCCGGTCGGGCCCGCTGGCG
GTAGACCGCGACTTTCTGCACCACAGCAGCGTCTCGGTCATTCCCGAGCA
CGATTTCATCCCCATGATTGACACGCAGGTGGGGCTCATTCAGACCATCA
CGTGCAGCACATCGTCGAAGGTACTGCAGAACTCGTGCCACATGCTGGAA
GGCACCCTCTGTGAGTTTTTCATCAGC
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