mRNA_P-wetherbeei_contig15711.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15711.1.1
Unique NamemRNA_P-wetherbeei_contig15711.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A3C0TW01_9PROT (Molybdenum cofactor biosynthesis protein B (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TW01_9PROT)

HSP 1 Score: 222 bits (566), Expect = 1.090e-72
Identity = 107/113 (94.69%), Postives = 108/113 (95.58%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            I DP ID VISTGGTGLTGRDVTPEAFHAVYEKEIDGFS+VFHAIS AKIGVSTIQSRATAGVA GTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR
Sbjct:   51 IADPGIDAVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSSVFHAISFAKIGVSTIQSRATAGVAGGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 163
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BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A353LMC9_9PROT (Molybdenum cofactor biosynthesis protein B n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LMC9_9PROT)

HSP 1 Score: 216 bits (549), Expect = 7.170e-70
Identity = 103/113 (91.15%), Postives = 107/113 (94.69%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            I DP IDVVISTGGTGLTGRDVTPEAFHAV+EKEIDGFSA+FH IS  KIGVSTIQSRATAGVA GTYLFALPGSPGACKDGWDGIL+WQLDYRFRPCNFVEIMPRLEEHK+R
Sbjct:   67 IADPKIDVVISTGGTGLTGRDVTPEAFHAVFEKEIDGFSAIFHRISFEKIGVSTIQSRATAGVAGGTYLFALPGSPGACKDGWDGILKWQLDYRFRPCNFVEIMPRLEEHKQR 179
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BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A2A4RZX1_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4RZX1_9HYPH)

HSP 1 Score: 202 bits (513), Expect = 1.970e-64
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 1 
Query:   16 IDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            +DVVISTGGTGLTGRDVTPEAFH+VYEKEIDGFSA+FH IS+AKIG STIQSRATAGV+ GTYLFALPGS GACKDGWDGILQ+QLDYR+RPCNFVEIMPRLEEH+R+
Sbjct:   72 VDVVISTGGTGLTGRDVTPEAFHSVYEKEIDGFSALFHQISYAKIGTSTIQSRATAGVSHGTYLFALPGSSGACKDGWDGILQYQLDYRYRPCNFVEIMPRLEEHRRK 179
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BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A081BAI4_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAI4_9HYPH)

HSP 1 Score: 198 bits (503), Expect = 6.550e-63
Identity = 93/113 (82.30%), Postives = 105/113 (92.92%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            I D  +DVVISTGGTGLTGRDVTPEAFH+VYEKEI+GF+A+FH IS+ KIG STIQSRATAGV+ GTYLFALPGS GACKDGWDGIL++QLDYR+RPCNFVEIMPRLEEH+R+
Sbjct:   67 IADKDVDVVISTGGTGLTGRDVTPEAFHSVYEKEIEGFAALFHQISYEKIGTSTIQSRATAGVSHGTYLFALPGSTGACKDGWDGILKYQLDYRYRPCNFVEIMPRLEEHRRK 179
[Close]
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A3B8XL01_9HYPH (Molybdenum cofactor biosynthesis protein B n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3B8XL01_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 7.620e-62
Identity = 95/114 (83.33%), Postives = 102/114 (89.47%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRRQ 342
            I D  IDVVISTGGTGLTGRDVTPEAF +VY+KEIDGFSA+FH +S  KIG STIQSRATAGVA GTYLFALPGSPGACKDGWD IL  QLDYR+RPCNFVEIMPRLEEHK+R+
Sbjct:   66 IADHRIDVVISTGGTGLTGRDVTPEAFQSVYDKEIDGFSALFHRVSFEKIGTSTIQSRATAGVAQGTYLFALPGSPGACKDGWDEILVHQLDYRYRPCNFVEIMPRLEEHKQRK 179
[Close]
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A3B8XNQ0_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3B8XNQ0_9HYPH)

HSP 1 Score: 195 bits (496), Expect = 7.870e-62
Identity = 95/114 (83.33%), Postives = 102/114 (89.47%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRRQ 342
            I D AID VISTGGTGLTGRDVTPEAF +VYEKEIDGFS +FH IS+ KIG STIQSRATAGVA GT+LFALPGSPGACKDGWD IL  QLDYR+RPCNFVEIMPRLEEHK+R+
Sbjct:   67 IADDAIDAVISTGGTGLTGRDVTPEAFKSVYEKEIDGFSTLFHRISYDKIGTSTIQSRATAGVAGGTFLFALPGSPGACKDGWDEILVHQLDYRYRPCNFVEIMPRLEEHKQRK 180
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BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A3D5UZK9_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D5UZK9_9HYPH)

HSP 1 Score: 193 bits (491), Expect = 5.500e-61
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRRQ 342
            I DP ID +ISTGGTG+TGRDVTPEAF +VY+KEIDGFS +FH +S  KIG STIQSRATAGVA GTYLFALPGSPGACKDGWD IL  QLDYRFRPCNFVEIMPRLEEHK R+
Sbjct:   73 INDPDIDCIISTGGTGVTGRDVTPEAFRSVYDKEIDGFSVLFHRVSFEKIGTSTIQSRATAGVAGGTYLFALPGSPGACKDGWDEILVHQLDYRFRPCNFVEIMPRLEEHKLRK 186
[Close]
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A2E5BNT1_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BNT1_9HYPH)

HSP 1 Score: 191 bits (484), Expect = 5.100e-60
Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            I +  IDVVISTGGTGLTGRDVTPEAFH+VYEKEIDGFSA+FH +S  KIGVSTIQSRATA VA GTYLFALPGS GA KDGWD ILQ+QLDYR+ PCNFVEIMPRLEEH+R+
Sbjct:   67 IANKEIDVVISTGGTGLTGRDVTPEAFHSVYEKEIDGFSALFHRVSFEKIGVSTIQSRATAXVAGGTYLFALPGSTGAVKDGWDEILQYQLDYRYLPCNFVEIMPRLEEHRRK 179
[Close]
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A2D8S009_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8S009_9HYPH)

HSP 1 Score: 190 bits (482), Expect = 1.030e-59
Identity = 91/109 (83.49%), Postives = 97/109 (88.99%), Query Frame = 1 
Query:   16 IDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRRQ 342
            +D VISTGGTGLTGRDVTPEAF +VY+KEIDGFS +FH +S  KIG STIQSRATAGVA GTYLFALPGSPGACKDGWD IL  QLDYRFRPCNFVEIMPRLEEHK R+
Sbjct:   71 VDAVISTGGTGLTGRDVTPEAFRSVYDKEIDGFSVLFHRVSFEKIGTSTIQSRATAGVAGGTYLFALPGSPGACKDGWDEILVHQLDYRFRPCNFVEIMPRLEEHKLRK 179
[Close]
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Match: A0A2Z4UG85_9HYPH (Molybdenum cofactor biosynthesis protein B n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UG85_9HYPH)

HSP 1 Score: 190 bits (482), Expect = 1.030e-59
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 1 
Query:    1 IMDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIGVSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFVEIMPRLEEHKRR 339
            I D  IDVVISTGGTGLTGRDVTPEAFH+VYEKEI+GF+A+FH +S  KIG STIQSRATAGVA GTYLFALPGS GA KDGWD IL++QLD R+RPCNFVEIMPRLEEHKR+
Sbjct:   67 IADKEIDVVISTGGTGLTGRDVTPEAFHSVYEKEIEGFAALFHQVSFQKIGTSTIQSRATAGVAGGTYLFALPGSTGAVKDGWDEILKFQLDIRYRPCNFVEIMPRLEEHKRK 179
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15711.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TW01_9PROT1.090e-7294.69Molybdenum cofactor biosynthesis protein B (Fragme... [more]
A0A353LMC9_9PROT7.170e-7091.15Molybdenum cofactor biosynthesis protein B n=3 Tax... [more]
A0A2A4RZX1_9HYPH1.970e-6487.96Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A081BAI4_9HYPH6.550e-6382.30Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A3B8XL01_9HYPH7.620e-6283.33Molybdenum cofactor biosynthesis protein B n=4 Tax... [more]
A0A3B8XNQ0_9HYPH7.870e-6283.33Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A3D5UZK9_9HYPH5.500e-6181.58Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A2E5BNT1_9HYPH5.100e-6082.30Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A2D8S009_9HYPH1.030e-5983.49Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]
A0A2Z4UG85_9HYPH1.030e-5981.42Molybdenum cofactor biosynthesis protein B n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15711contigP-wetherbeei_contig15711:2..346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_1551
Preferred namemoaB
PFAMsMoCF_biosynth
Model size345
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00002
KEGG koko:K03638
KEGG ReactionR09726
KEGG Pathwayko00790,ko01100,map00790,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0042802,GO:0044424,GO:0044444,GO:0044464
Exons1
Evalue2.95e-63
EggNOG OGsCOG0521@1|root,COG0521@2|Bacteria,1R9W2@1224|Proteobacteria,2TTA8@28211|Alphaproteobacteria,4BQ70@82117|unclassified Alphaproteobacteria
EC2.7.7.75
DescriptionMay be involved in the biosynthesis of molybdopterin
Cds size342
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186064.9722502-UTR-P-wetherbeei_contig15711:1..41683186064.9722502-UTR-P-wetherbeei_contig15711:1..4Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15711 2..4 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186064.982299-CDS-P-wetherbeei_contig15711:4..3461683186064.982299-CDS-P-wetherbeei_contig15711:4..346Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15711 5..346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15711.1.1prot_P-wetherbeei_contig15711.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15711 5..346 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15711.1.1

>prot_P-wetherbeei_contig15711.1.1 ID=prot_P-wetherbeei_contig15711.1.1|Name=mRNA_P-wetherbeei_contig15711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
MDPAIDVVISTGGTGLTGRDVTPEAFHAVYEKEIDGFSAVFHAISHAKIG
VSTIQSRATAGVAAGTYLFALPGSPGACKDGWDGILQWQLDYRFRPCNFV
EIMPRLEEHKRRQ*
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mRNA from alignment at P-wetherbeei_contig15711:2..346+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15711.1.1 ID=mRNA_P-wetherbeei_contig15711.1.1|Name=mRNA_P-wetherbeei_contig15711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig15711:2..346+ (Phaeothamnion wetherbeei SAG_119_79)
ATTATGGACCCGGCCATTGATGTGGTGATTTCCACCGGCGGCACCGGCCT
GACCGGGCGCGATGTGACGCCGGAAGCTTTCCATGCCGTGTATGAAAAGG
AAATTGACGGTTTTTCTGCTGTGTTTCACGCCATCAGCCATGCCAAGATT
GGCGTTTCCACCATTCAGTCACGTGCAACGGCGGGGGTTGCGGCGGGCAC
CTATCTGTTTGCACTGCCTGGATCACCCGGCGCCTGCAAGGATGGCTGGG
ACGGGATTTTGCAATGGCAGCTGGATTACCGCTTCCGTCCCTGCAATTTT
GTCGAGATCATGCCGCGCCTGGAAGAACATAAACGCCGCCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15711:2..346+

>mRNA_P-wetherbeei_contig15711.1.1 ID=mRNA_P-wetherbeei_contig15711.1.1|Name=mRNA_P-wetherbeei_contig15711.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig15711:2..346+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCCGGCCATTGATGTGGTGATTTCCACCGGCGGCACCGGCCTGAC
CGGGCGCGATGTGACGCCGGAAGCTTTCCATGCCGTGTATGAAAAGGAAA
TTGACGGTTTTTCTGCTGTGTTTCACGCCATCAGCCATGCCAAGATTGGC
GTTTCCACCATTCAGTCACGTGCAACGGCGGGGGTTGCGGCGGGCACCTA
TCTGTTTGCACTGCCTGGATCACCCGGCGCCTGCAAGGATGGCTGGGACG
GGATTTTGCAATGGCAGCTGGATTACCGCTTCCGTCCCTGCAATTTTGTC
GAGATCATGCCGCGCCTGGAAGAACATAAACGCCGCCAGTGA
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