mRNA_P-wetherbeei_contig15706.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A8J7N402_9PROT (TetR/AcrR family transcriptional regulator n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N402_9PROT) HSP 1 Score: 281 bits (718), Expect = 9.590e-93 Identity = 151/218 (69.27%), Postives = 171/218 (78.44%), Query Frame = 1
Query: 52 RASEMAAR-----KPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYV 690
RA AAR +PAR DP+GVRR+I+ VAT EF R GYSGARVD IAA TRTSKRMIYYYF KEGLYVAVLE+AYR IR+VEA L+L P +ALRRL FDY +AHP+F+RLVMIENIHHARHMKRS+AIQ++N TAI AI RLY RGRAAG FR GI ID+HMTISAL F+VANRATFSTIFK DMAS A A+RRA++ DIV Y+
Sbjct: 16 RAQVAAARLRPPGRPARTHDPQGVRRDIIAVATGEFARSGYSGARVDEIAARTRTSKRMIYYYFGGKEGLYVAVLEEAYRRIRTVEAKLDLDAFAPAEALRRLTAHAFDYYDAHPEFVRLVMIENIHHARHMKRSKAIQALNLTAIDAIRRLYERGRAAGVFRAGIDPIDIHMTISALGLFHVANRATFSTIFKNDMASPAARARRRAQIEDIVSLYL 233
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: UPI000E5AC660 (TetR family transcriptional regulator n=1 Tax=Aquabacterium tepidiphilum TaxID=2315841 RepID=UPI000E5AC660) HSP 1 Score: 259 bits (663), Expect = 1.660e-84 Identity = 138/222 (62.16%), Postives = 167/222 (75.23%), Query Frame = 1
Query: 28 VRRSWQPWRASEMAARKPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
VR++ +P RA AR V DPE ++ILEVAT EF G SGAR+D IAALTRTSKRMIYYYF SKEGLY+AVLE+AYR IRS+E L L L PEDALR+LV FTFDYQ A+PDFIRLVM ENIH+ + +SR+IQ +N AI A+ +Y RGR AG FR I +DLHM+ISALCFFNV+NR TFS IFKRD+ S+ ALA RR+ + ++++RYVR
Sbjct: 10 VRKAGRPARAKAEGAR----VNDPERTMQDILEVATREFAAKGLSGARIDEIAALTRTSKRMIYYYFGSKEGLYIAVLEEAYRRIRSIENQLHLEDLPPEDALRKLVAFTFDYQLANPDFIRLVMTENIHNGEFLAQSRSIQDLNVPAIHAVQAVYERGRDAGLFRGDIDPVDLHMSISALCFFNVSNRHTFSLIFKRDLCSAEALATRRSNIVEMIVRYVR 227
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A370HNL2_9HYPH (TetR family transcriptional regulator n=2 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HNL2_9HYPH) HSP 1 Score: 259 bits (661), Expect = 4.810e-84 Identity = 134/205 (65.37%), Postives = 155/205 (75.61%), Query Frame = 1
Query: 79 PARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
P R DPE R+NIL VAT EF GYSGARVD IAA T TSKRMIYYYF KEGL+V VLE+AYR IR +EATL+LAHL PEDA+R LV FTFDYQN++ DFIRLVM+ENIH H+ RSRAIQ +N + I + +Y RG + FR GI IDLHMTISALCFFNV+NRATFS IFKRDM + LAKRR V + V+RY++
Sbjct: 36 PGRGHDPELTRQNILAVATKEFAEKGYSGARVDEIAARTNTSKRMIYYYFGDKEGLFVTVLEEAYRRIRQIEATLDLAHLEPEDAIRALVGFTFDYQNSNEDFIRLVMVENIHQGVHLARSRAIQDLNVSVIHTLRDIYDRGVSQDLFRKGIDEIDLHMTISALCFFNVSNRATFSQIFKRDMTAPEMLAKRRETVIETVIRYLK 240
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A1B2EKS3_9HYPH (TetR family transcriptional regulator n=6 Tax=Microvirga TaxID=186650 RepID=A0A1B2EKS3_9HYPH) HSP 1 Score: 256 bits (655), Expect = 2.090e-83 Identity = 132/200 (66.00%), Postives = 154/200 (77.00%), Query Frame = 1
Query: 94 DPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
DPE R+NIL VAT EF GYSGARVD IAA T TSKRMIYYYF+ KEGL+VAVLE AYR IR +EATL+L L PE A+R LV FTFDYQN++ DFIRLVM+ENIH H+ RSRAIQ +N + I+ + +Y RG + G FR GI IDLHMTISALCFFNV+NRATFS IFK+DM+S LAKRR V D V+RY++
Sbjct: 22 DPELTRQNILAVATREFAEKGYSGARVDEIAAQTNTSKRMIYYYFEDKEGLFVAVLEDAYRRIRQIEATLDLVDLEPEAAIRALVGFTFDYQNSNEDFIRLVMVENIHQGVHLARSRAIQDLNVSVINTLREIYERGVSDGVFREGIDEIDLHMTISALCFFNVSNRATFSQIFKKDMSSQEMLAKRRETVIDTVIRYLK 221
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A554XH99_9BURK (HTH-type transcriptional repressor NicS n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A554XH99_9BURK) HSP 1 Score: 256 bits (655), Expect = 3.010e-83 Identity = 136/216 (62.96%), Postives = 159/216 (73.61%), Query Frame = 1
Query: 55 ASEMAARKPA---RVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
AS ARKPA R DPE ++ILEVAT EF G +GAR+D IA LTRTSKRMIYYYF SKEGLY+AVLE AYR IR +E+ L L L PE+ALR LV FTFDYQNA+PDFIRLVM ENIH + +S+ IQ +N AI A+ +Y RG A G FR + +DLHM+ISALCFFNV+NR TFS IFKRDMAS ALA RRA + D+++RYVR
Sbjct: 17 ASSKPARKPAAAPRTNDPERTMQDILEVATREFAAKGLTGARIDEIAELTRTSKRMIYYYFGSKEGLYIAVLEDAYRRIRHIESELHLEDLPPEEALRTLVAFTFDYQNANPDFIRLVMNENIHRGEFLAQSQTIQQLNVPAIDAVRTVYERGCATGVFRDDLDPVDLHMSISALCFFNVSNRHTFSLIFKRDMASPEALAARRASIVDLIVRYVR 232
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A512C560_9HYPH (TetR family transcriptional regulator n=2 Tax=Microvirga aerophila TaxID=670291 RepID=A0A512C560_9HYPH) HSP 1 Score: 248 bits (633), Expect = 1.680e-80 Identity = 128/191 (67.02%), Postives = 148/191 (77.49%), Query Frame = 1
Query: 121 LEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
+ VAT EF GYSGARVD IAA T TSKRMIYYYF+ KEGL+VAVLE+AYR IR +EATL+LAHL PE+A+R LV FTFDYQNA+ DFIRLVM+ENIH H+ RSRAIQ +N + I + +Y RG AG FR GI IDLHMTISALCFFNV+NRATFS IFKR+M + LA RR V D V+RY+R
Sbjct: 1 MAVATKEFAEKGYSGARVDEIAAHTNTSKRMIYYYFEDKEGLFVAVLEEAYRRIRQIEATLDLAHLEPEEAIRALVGFTFDYQNANEDFIRLVMVENIHQGVHLARSRAIQDLNVSIIDTLRDIYDRGVKAGTFREGIDEIDLHMTISALCFFNVSNRATFSQIFKRNMEAPDMLANRRETVIDTVIRYLR 191
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A2S5SS08_9BURK (TetR family transcriptional regulator n=2 Tax=Zhizhongheella caldifontis TaxID=1452508 RepID=A0A2S5SS08_9BURK) HSP 1 Score: 248 bits (632), Expect = 2.720e-80 Identity = 127/193 (65.80%), Postives = 148/193 (76.68%), Query Frame = 1
Query: 115 NILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
NILEVAT EF G +GAR+D IA LTRTSKRMIYYYF SKEGLY+AVLE+AYR IRS+E L L L PE+ALR LV FTFDYQNA+PDFIRLVM ENIH + RS IQ +N AI A+ +Y RGR AG FR + +DLH++ISALCFFNV+NR TFS IFKRDM S +ALA RRA + D+++RYVR
Sbjct: 3 NILEVATQEFAAKGLTGARIDEIAELTRTSKRMIYYYFGSKEGLYIAVLEEAYRRIRSIENELHLEDLPPEEALRTLVGFTFDYQNANPDFIRLVMNENIHRGEFLARSETIQQLNVPAIDAVRAVYERGRKAGVFRADLDPVDLHLSISALCFFNVSNRHTFSLIFKRDMDSPQALAARRASIVDLIVRYVR 195
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A0L6T616_9BURK (TetR family transcriptional regulator n=1 Tax=Methylibium sp. NZG TaxID=1686064 RepID=A0A0L6T616_9BURK) HSP 1 Score: 249 bits (635), Expect = 3.160e-80 Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = 1
Query: 43 QPWRASEMAARKPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 693
+P RA+ A +P R DPE +I+EVAT EF G SGAR+DAIAA TRTSKRMIYYYF SKEGLYVAVLEQAYR IRS+E L L L PEDALR+LV FTFDYQ A PDFIRLVM ENIH+ + +S+ IQ +N I+A+ +Y RG AG FR + AIDLHM+ISALCFFNVANR TF+ IFKR++ S RA+A+RR + ++V+R+VR
Sbjct: 16 KPRRAARPKAGEP-RTNDPERTMADIVEVATKEFADKGLSGARIDAIAASTRTSKRMIYYYFTSKEGLYVAVLEQAYRRIRSIENELRLEDLEPEDALRKLVGFTFDYQLASPDFIRLVMTENIHNGEFLAQSKTIQQLNVPVINAVKGVYERGVKAGIFRRNLDAIDLHMSISALCFFNVANRHTFALIFKRELVSPRAIAQRRDSIIEMVVRFVR 231
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A2U8FTU3_9BURK (TetR family transcriptional regulator n=1 Tax=Aquabacterium olei TaxID=1296669 RepID=A0A2U8FTU3_9BURK) HSP 1 Score: 248 bits (632), Expect = 1.030e-79 Identity = 139/237 (58.65%), Postives = 168/237 (70.89%), Query Frame = 1
Query: 1 ISTPTCRPSVRRSWQPWRASEMAARK---PARVQDPEG--VRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVRA 696
+S P SV RS QP A A R+ PA + P+ R+NILEVAT EF G+SGAR+D IAALT+TSKRMIYYYF SKEGLY+AVLE AY+ IR +E+ L L L PEDALRRLVEFTFDYQ +P+FIRLVM EN+H + +S IQ +NT AI +S++Y RG AG FR G+ IDLHM+ISALCFF V+NR TFS IFKRD+ S A RRA + D+++RYVRA
Sbjct: 1 MSKPASISSVARS-QPATAERTAPRRGRPPASERGPDADHTRQNILEVATREFADKGFSGARIDEIAALTQTSKRMIYYYFNSKEGLYIAVLEHAYQRIRHIESELHLEDLAPEDALRRLVEFTFDYQVGNPEFIRLVMNENMHSGEFLAQSSLIQQLNTPAILGLSQVYERGCKAGVFRTGLDPIDLHMSISALCFFTVSNRHTFSLIFKRDLGSPATQALRRANIVDMIVRYVRA 236
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: UPI0019CBACB0 (TetR family transcriptional regulator n=1 Tax=Alsobacter metallidurans TaxID=340221 RepID=UPI0019CBACB0) HSP 1 Score: 246 bits (628), Expect = 2.370e-79 Identity = 131/206 (63.59%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 76 KPA-RVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYV 690
KPA R QDPEGVRRNILEVA+ EF HGYSGARVD IAA T TSKRMIYYYFK KEGL+VA LE AY +R VE L L L P DALRRL EFTFDYQN HP F+RL+++ENIH+ H+ +S IQ +N + I + +Y RG G FR G+ IDLHMTISAL FNV++RATFS IF+ M + ALA+RRA AD VLRYV
Sbjct: 6 KPATRAQDPEGVRRNILEVASREFAEHGYSGARVDEIAAKTDTSKRMIYYYFKDKEGLFVAALEAAYATMRQVERELNLTGLGPADALRRLTEFTFDYQNGHPWFVRLIIVENIHNGEHLAKSAKIQKLNLSIIEMLRDVYDRGVREGVFRAGLDIIDLHMTISALAIFNVSHRATFSRIFRVAMDTPEALARRRAVAADTVLRYV 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15706.1.1 >prot_P-wetherbeei_contig15706.1.1 ID=prot_P-wetherbeei_contig15706.1.1|Name=mRNA_P-wetherbeei_contig15706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp ISTPTCRPSVRRSWQPWRASEMAARKPARVQDPEGVRRNILEVATTEFVRback to top mRNA from alignment at P-wetherbeei_contig15706:606..1304+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15706.1.1 ID=mRNA_P-wetherbeei_contig15706.1.1|Name=mRNA_P-wetherbeei_contig15706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig15706:606..1304+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15706:606..1304+ >mRNA_P-wetherbeei_contig15706.1.1 ID=mRNA_P-wetherbeei_contig15706.1.1|Name=mRNA_P-wetherbeei_contig15706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig15706:606..1304+ (Phaeothamnion wetherbeei SAG_119_79)back to top |