prot_P-wetherbeei_contig15706.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15706.1.1
Unique Nameprot_P-wetherbeei_contig15706.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length233
Homology
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A8J7N402_9PROT (TetR/AcrR family transcriptional regulator n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N402_9PROT)

HSP 1 Score: 281 bits (718), Expect = 9.590e-93
Identity = 151/218 (69.27%), Postives = 171/218 (78.44%), Query Frame = 0
Query:   18 RASEMAAR-----KPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYV 230
            RA   AAR     +PAR  DP+GVRR+I+ VAT EF R GYSGARVD IAA TRTSKRMIYYYF  KEGLYVAVLE+AYR IR+VEA L+L    P +ALRRL    FDY +AHP+F+RLVMIENIHHARHMKRS+AIQ++N TAI AI RLY RGRAAG FR GI  ID+HMTISAL  F+VANRATFSTIFK DMAS  A A+RRA++ DIV  Y+
Sbjct:   16 RAQVAAARLRPPGRPARTHDPQGVRRDIIAVATGEFARSGYSGARVDEIAARTRTSKRMIYYYFGGKEGLYVAVLEEAYRRIRTVEAKLDLDAFAPAEALRRLTAHAFDYYDAHPEFVRLVMIENIHHARHMKRSKAIQALNLTAIDAIRRLYERGRAAGVFRAGIDPIDIHMTISALGLFHVANRATFSTIFKNDMASPAARARRRAQIEDIVSLYL 233          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: UPI000E5AC660 (TetR family transcriptional regulator n=1 Tax=Aquabacterium tepidiphilum TaxID=2315841 RepID=UPI000E5AC660)

HSP 1 Score: 259 bits (663), Expect = 1.660e-84
Identity = 138/222 (62.16%), Postives = 167/222 (75.23%), Query Frame = 0
Query:   10 VRRSWQPWRASEMAARKPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            VR++ +P RA    AR    V DPE   ++ILEVAT EF   G SGAR+D IAALTRTSKRMIYYYF SKEGLY+AVLE+AYR IRS+E  L L  L PEDALR+LV FTFDYQ A+PDFIRLVM ENIH+   + +SR+IQ +N  AI A+  +Y RGR AG FR  I  +DLHM+ISALCFFNV+NR TFS IFKRD+ S+ ALA RR+ + ++++RYVR
Sbjct:   10 VRKAGRPARAKAEGAR----VNDPERTMQDILEVATREFAAKGLSGARIDEIAALTRTSKRMIYYYFGSKEGLYIAVLEEAYRRIRSIENQLHLEDLPPEDALRKLVAFTFDYQLANPDFIRLVMTENIHNGEFLAQSRSIQDLNVPAIHAVQAVYERGRDAGLFRGDIDPVDLHMSISALCFFNVSNRHTFSLIFKRDLCSAEALATRRSNIVEMIVRYVR 227          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A370HNL2_9HYPH (TetR family transcriptional regulator n=2 Tax=Microvirga subterranea TaxID=186651 RepID=A0A370HNL2_9HYPH)

HSP 1 Score: 259 bits (661), Expect = 4.810e-84
Identity = 134/205 (65.37%), Postives = 155/205 (75.61%), Query Frame = 0
Query:   27 PARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            P R  DPE  R+NIL VAT EF   GYSGARVD IAA T TSKRMIYYYF  KEGL+V VLE+AYR IR +EATL+LAHL PEDA+R LV FTFDYQN++ DFIRLVM+ENIH   H+ RSRAIQ +N + I  +  +Y RG +   FR GI  IDLHMTISALCFFNV+NRATFS IFKRDM +   LAKRR  V + V+RY++
Sbjct:   36 PGRGHDPELTRQNILAVATKEFAEKGYSGARVDEIAARTNTSKRMIYYYFGDKEGLFVTVLEEAYRRIRQIEATLDLAHLEPEDAIRALVGFTFDYQNSNEDFIRLVMVENIHQGVHLARSRAIQDLNVSVIHTLRDIYDRGVSQDLFRKGIDEIDLHMTISALCFFNVSNRATFSQIFKRDMTAPEMLAKRRETVIETVIRYLK 240          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A1B2EKS3_9HYPH (TetR family transcriptional regulator n=6 Tax=Microvirga TaxID=186650 RepID=A0A1B2EKS3_9HYPH)

HSP 1 Score: 256 bits (655), Expect = 2.090e-83
Identity = 132/200 (66.00%), Postives = 154/200 (77.00%), Query Frame = 0
Query:   32 DPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            DPE  R+NIL VAT EF   GYSGARVD IAA T TSKRMIYYYF+ KEGL+VAVLE AYR IR +EATL+L  L PE A+R LV FTFDYQN++ DFIRLVM+ENIH   H+ RSRAIQ +N + I+ +  +Y RG + G FR GI  IDLHMTISALCFFNV+NRATFS IFK+DM+S   LAKRR  V D V+RY++
Sbjct:   22 DPELTRQNILAVATREFAEKGYSGARVDEIAAQTNTSKRMIYYYFEDKEGLFVAVLEDAYRRIRQIEATLDLVDLEPEAAIRALVGFTFDYQNSNEDFIRLVMVENIHQGVHLARSRAIQDLNVSVINTLREIYERGVSDGVFREGIDEIDLHMTISALCFFNVSNRATFSQIFKKDMSSQEMLAKRRETVIDTVIRYLK 221          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A554XH99_9BURK (HTH-type transcriptional repressor NicS n=3 Tax=Burkholderiales TaxID=80840 RepID=A0A554XH99_9BURK)

HSP 1 Score: 256 bits (655), Expect = 3.010e-83
Identity = 136/216 (62.96%), Postives = 159/216 (73.61%), Query Frame = 0
Query:   19 ASEMAARKPA---RVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            AS   ARKPA   R  DPE   ++ILEVAT EF   G +GAR+D IA LTRTSKRMIYYYF SKEGLY+AVLE AYR IR +E+ L L  L PE+ALR LV FTFDYQNA+PDFIRLVM ENIH    + +S+ IQ +N  AI A+  +Y RG A G FR  +  +DLHM+ISALCFFNV+NR TFS IFKRDMAS  ALA RRA + D+++RYVR
Sbjct:   17 ASSKPARKPAAAPRTNDPERTMQDILEVATREFAAKGLTGARIDEIAELTRTSKRMIYYYFGSKEGLYIAVLEDAYRRIRHIESELHLEDLPPEEALRTLVAFTFDYQNANPDFIRLVMNENIHRGEFLAQSQTIQQLNVPAIDAVRTVYERGCATGVFRDDLDPVDLHMSISALCFFNVSNRHTFSLIFKRDMASPEALAARRASIVDLIVRYVR 232          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A512C560_9HYPH (TetR family transcriptional regulator n=2 Tax=Microvirga aerophila TaxID=670291 RepID=A0A512C560_9HYPH)

HSP 1 Score: 248 bits (633), Expect = 1.680e-80
Identity = 128/191 (67.02%), Postives = 148/191 (77.49%), Query Frame = 0
Query:   41 LEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            + VAT EF   GYSGARVD IAA T TSKRMIYYYF+ KEGL+VAVLE+AYR IR +EATL+LAHL PE+A+R LV FTFDYQNA+ DFIRLVM+ENIH   H+ RSRAIQ +N + I  +  +Y RG  AG FR GI  IDLHMTISALCFFNV+NRATFS IFKR+M +   LA RR  V D V+RY+R
Sbjct:    1 MAVATKEFAEKGYSGARVDEIAAHTNTSKRMIYYYFEDKEGLFVAVLEEAYRRIRQIEATLDLAHLEPEEAIRALVGFTFDYQNANEDFIRLVMVENIHQGVHLARSRAIQDLNVSIIDTLRDIYDRGVKAGTFREGIDEIDLHMTISALCFFNVSNRATFSQIFKRNMEAPDMLANRRETVIDTVIRYLR 191          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A2S5SS08_9BURK (TetR family transcriptional regulator n=2 Tax=Zhizhongheella caldifontis TaxID=1452508 RepID=A0A2S5SS08_9BURK)

HSP 1 Score: 248 bits (632), Expect = 2.720e-80
Identity = 127/193 (65.80%), Postives = 148/193 (76.68%), Query Frame = 0
Query:   39 NILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            NILEVAT EF   G +GAR+D IA LTRTSKRMIYYYF SKEGLY+AVLE+AYR IRS+E  L L  L PE+ALR LV FTFDYQNA+PDFIRLVM ENIH    + RS  IQ +N  AI A+  +Y RGR AG FR  +  +DLH++ISALCFFNV+NR TFS IFKRDM S +ALA RRA + D+++RYVR
Sbjct:    3 NILEVATQEFAAKGLTGARIDEIAELTRTSKRMIYYYFGSKEGLYIAVLEEAYRRIRSIENELHLEDLPPEEALRTLVGFTFDYQNANPDFIRLVMNENIHRGEFLARSETIQQLNVPAIDAVRAVYERGRKAGVFRADLDPVDLHLSISALCFFNVSNRHTFSLIFKRDMDSPQALAARRASIVDLIVRYVR 195          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A0L6T616_9BURK (TetR family transcriptional regulator n=1 Tax=Methylibium sp. NZG TaxID=1686064 RepID=A0A0L6T616_9BURK)

HSP 1 Score: 249 bits (635), Expect = 3.160e-80
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = 0
Query:   15 QPWRASEMAARKPARVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVR 231
            +P RA+   A +P R  DPE    +I+EVAT EF   G SGAR+DAIAA TRTSKRMIYYYF SKEGLYVAVLEQAYR IRS+E  L L  L PEDALR+LV FTFDYQ A PDFIRLVM ENIH+   + +S+ IQ +N   I+A+  +Y RG  AG FR  + AIDLHM+ISALCFFNVANR TF+ IFKR++ S RA+A+RR  + ++V+R+VR
Sbjct:   16 KPRRAARPKAGEP-RTNDPERTMADIVEVATKEFADKGLSGARIDAIAASTRTSKRMIYYYFTSKEGLYVAVLEQAYRRIRSIENELRLEDLEPEDALRKLVGFTFDYQLASPDFIRLVMTENIHNGEFLAQSKTIQQLNVPVINAVKGVYERGVKAGIFRRNLDAIDLHMSISALCFFNVANRHTFALIFKRELVSPRAIAQRRDSIIEMVVRFVR 231          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: A0A2U8FTU3_9BURK (TetR family transcriptional regulator n=1 Tax=Aquabacterium olei TaxID=1296669 RepID=A0A2U8FTU3_9BURK)

HSP 1 Score: 248 bits (632), Expect = 1.030e-79
Identity = 139/237 (58.65%), Postives = 168/237 (70.89%), Query Frame = 0
Query:    1 ISTPTCRPSVRRSWQPWRASEMAARK---PARVQDPEG--VRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYVRA 232
            +S P    SV RS QP  A   A R+   PA  + P+    R+NILEVAT EF   G+SGAR+D IAALT+TSKRMIYYYF SKEGLY+AVLE AY+ IR +E+ L L  L PEDALRRLVEFTFDYQ  +P+FIRLVM EN+H    + +S  IQ +NT AI  +S++Y RG  AG FR G+  IDLHM+ISALCFF V+NR TFS IFKRD+ S    A RRA + D+++RYVRA
Sbjct:    1 MSKPASISSVARS-QPATAERTAPRRGRPPASERGPDADHTRQNILEVATREFADKGFSGARIDEIAALTQTSKRMIYYYFNSKEGLYIAVLEHAYQRIRHIESELHLEDLAPEDALRRLVEFTFDYQVGNPEFIRLVMNENMHSGEFLAQSSLIQQLNTPAILGLSQVYERGCKAGVFRTGLDPIDLHMSISALCFFTVSNRHTFSLIFKRDLGSPATQALRRANIVDMIVRYVRA 236          
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Match: UPI0019CBACB0 (TetR family transcriptional regulator n=1 Tax=Alsobacter metallidurans TaxID=340221 RepID=UPI0019CBACB0)

HSP 1 Score: 246 bits (628), Expect = 2.370e-79
Identity = 131/206 (63.59%), Postives = 151/206 (73.30%), Query Frame = 0
Query:   26 KPA-RVQDPEGVRRNILEVATTEFVRHGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEATLELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAIQSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRATFSTIFKRDMASSRALAKRRAEVADIVLRYV 230
            KPA R QDPEGVRRNILEVA+ EF  HGYSGARVD IAA T TSKRMIYYYFK KEGL+VA LE AY  +R VE  L L  L P DALRRL EFTFDYQN HP F+RL+++ENIH+  H+ +S  IQ +N + I  +  +Y RG   G FR G+  IDLHMTISAL  FNV++RATFS IF+  M +  ALA+RRA  AD VLRYV
Sbjct:    6 KPATRAQDPEGVRRNILEVASREFAEHGYSGARVDEIAAKTDTSKRMIYYYFKDKEGLFVAALEAAYATMRQVERELNLTGLGPADALRRLTEFTFDYQNGHPWFVRLIIVENIHNGEHLAKSAKIQKLNLSIIEMLRDVYDRGVREGVFRAGLDIIDLHMTISALAIFNVSHRATFSRIFRVAMDTPEALARRRAVAADTVLRYV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15706.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J7N402_9PROT9.590e-9369.27TetR/AcrR family transcriptional regulator n=1 Tax... [more]
UPI000E5AC6601.660e-8462.16TetR family transcriptional regulator n=1 Tax=Aqua... [more]
A0A370HNL2_9HYPH4.810e-8465.37TetR family transcriptional regulator n=2 Tax=Micr... [more]
A0A1B2EKS3_9HYPH2.090e-8366.00TetR family transcriptional regulator n=6 Tax=Micr... [more]
A0A554XH99_9BURK3.010e-8362.96HTH-type transcriptional repressor NicS n=3 Tax=Bu... [more]
A0A512C560_9HYPH1.680e-8067.02TetR family transcriptional regulator n=2 Tax=Micr... [more]
A0A2S5SS08_9BURK2.720e-8065.80TetR family transcriptional regulator n=2 Tax=Zhiz... [more]
A0A0L6T616_9BURK3.160e-8061.75TetR family transcriptional regulator n=1 Tax=Meth... [more]
A0A2U8FTU3_9BURK1.030e-7958.65TetR family transcriptional regulator n=1 Tax=Aqua... [more]
UPI0019CBACB02.370e-7963.59TetR family transcriptional regulator n=1 Tax=Also... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001647DNA-binding HTH domain, TetR-typePRINTSPR00455HTHTETRcoord: 40..53
score: 31.84
coord: 61..84
score: 30.95
IPR001647DNA-binding HTH domain, TetR-typePFAMPF00440TetR_Ncoord: 40..86
e-value: 2.7E-12
score: 46.3
IPR001647DNA-binding HTH domain, TetR-typePROSITEPS50977HTH_TETR_2coord: 34..94
score: 17.730354
NoneNo IPR availableGENE3D1.10.357.10Tetracycline Repressor, domain 2coord: 36..232
e-value: 3.4E-64
score: 218.9
NoneNo IPR availablePANTHERPTHR30328TRANSCRIPTIONAL REPRESSORcoord: 21..232
IPR041474HTH-type transcriptional repressor NicS, C-terminalPFAMPF17938TetR_C_29coord: 108..226
e-value: 1.1E-48
score: 164.2
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 106..231
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 28..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15706contigP-wetherbeei_contig15706:606..1304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15706.1.1mRNA_P-wetherbeei_contig15706.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15706 606..1304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15706.1.1 ID=prot_P-wetherbeei_contig15706.1.1|Name=mRNA_P-wetherbeei_contig15706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp
ISTPTCRPSVRRSWQPWRASEMAARKPARVQDPEGVRRNILEVATTEFVR
HGYSGARVDAIAALTRTSKRMIYYYFKSKEGLYVAVLEQAYRNIRSVEAT
LELAHLTPEDALRRLVEFTFDYQNAHPDFIRLVMIENIHHARHMKRSRAI
QSVNTTAISAISRLYARGRAAGKFRPGIGAIDLHMTISALCFFNVANRAT
FSTIFKRDMASSRALAKRRAEVADIVLRYVRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001647HTH_TetR
IPR041474NicS_C
IPR036271Tet_transcr_reg_TetR-rel_C_sf
IPR009057Homeobox-like_sf