mRNA_P-wetherbeei_contig157.11.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig157.11.1
Unique NamemRNA_P-wetherbeei_contig157.11.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: D7FW81_ECTSI (Pantothenate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW81_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.650e-39
Identity = 75/162 (46.30%), Postives = 98/162 (60.49%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESG-----------GRGVPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            L LM+GNSRLHWA+L   +V+  WDT HL  + G             G+P  ++ +   Q  DD  P +    N +  Y +  P RF     ASVVP+E+E+W+RRCP +  ++S DALAG++ YPTLG DRALAVRG     GWP+LV+DCGSA   TAAD
Sbjct:    7 LCLMIGNSRLHWALLERDDVMEMWDTGHLRKDDGIEGPTATSGAVQEGIPLSLMSSRVGQTVDDGVPPTGDGGNASTCYTA-DPRRFK---VASVVPEELERWRRRCPGISPISSTDALAGVQEYPTLGVDRALAVRGAARMRGWPVLVIDCGSALTFTAAD 164          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: UPI00034A64E2 (pantothenate kinase n=1 Tax=Baaleninema simplex TaxID=2862350 RepID=UPI00034A64E2)

HSP 1 Score: 94.7 bits (234), Expect = 1.170e-20
Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLT 444
            LAL +GNSRLHWA     N+V+ W+T HLDAE+                  D    + F F     +  ++G LR      ASVVPD ++ W+ R P          L G+  YPTLG DRALAV G G R+G+P+L+VD G+A  LT
Sbjct:   15 LALGIGNSRLHWARFEGDNLVITWNTPHLDAEA-----------------IDRLQSSQFDFSPWGVV-AAQGDLRLV---VASVVPDRLKLWRSRVPLTNLSLDNVPLRGL--YPTLGIDRALAVLGAGTRYGFPVLLVDGGTALTLT 139          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: K9SBT7_9CYAN (Type III pantothenate kinase n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9SBT7_9CYAN)

HSP 1 Score: 92.4 bits (228), Expect = 7.550e-20
Identity = 69/152 (45.39%), Postives = 83/152 (54.61%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRG-PLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LALM+GNSRLHWA+ +   +   WDT H D  S G   P  IL  G       Q P  F  Q    L +  G PLR     AASVVP +M+ W R  P+   +T  D L     YPTLG DRALA+ G G+R G+P LV+D G+A  LT AD
Sbjct:   23 LALMMGNSRLHWALFQASALQRTWDTPHGDLASLGAIAP--ILAAG-------QIPPDFLPQG---LALPPGLPLR-----AASVVPAQMDLW-RHYPEYAAITLNDLLL-QGCYPTLGIDRALALVGVGDRLGFPALVIDAGTALTLTGAD 155          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: A0A0M1JXB6_9CYAN (Type III pantothenate kinase n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JXB6_9CYAN)

HSP 1 Score: 92.0 bits (227), Expect = 8.480e-20
Identity = 57/151 (37.75%), Postives = 79/151 (52.32%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LALM+G+S LHWA  +   ++  WDT HL+ E     +   ++  G   F+DD +P            +SRG       W ASVVP++ + W+R             L G+  YPTLG DRALA  G GE+FG+P+LVVD G+A   T  +
Sbjct:   13 LALMIGSSHLHWAEFQGKELLTAWDTPHLNPE-----IVQELIKGG---FADDLWPEILPVPP-----LSRG----ASLWIASVVPEQTQLWQRYAQAKAIALDDLPLKGL--YPTLGIDRALAALGAGEKFGFPVLVVDAGTAMTFTGVN 144          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: A0A6I5QVB0_9CYAN (Type III pantothenate kinase n=1 Tax=Leptolyngbya sp. SIO1E4 TaxID=2607768 RepID=A0A6I5QVB0_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 2.240e-19
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPA--SFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LAL++GN+RLHWA   D  +   W T HL+A      +    +PN    F+ D  P   +      + L+ +  PL     + ASVVP +   W    P  R+L   D +     YPTLG DRAL + G G+R+GWP+LV+D G+A   TA D
Sbjct:   12 LALVIGNTRLHWAAFVDNVLQTTWHTRHLNATDVASLIQQQFIPNSWAPFTTDSVPLLPTPGHAEDDGLHNAELPL-----YIASVVPAQAALWSIY-PGSRELHL-DQIPLQNLYPTLGIDRALNLLGAGDRYGWPVLVIDAGTALTFTAGD 157          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: A0A7C9Q1B8_9CYAN (Type III pantothenate kinase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9Q1B8_9CYAN)

HSP 1 Score: 90.1 bits (222), Expect = 6.300e-19
Identity = 64/168 (38.10%), Postives = 86/168 (51.19%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHL------DAESGGRGVPPHI--------LPNGAQQFSDDQYP--ASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDA-LAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LAL +GNSRLHWA+  D  + + WDT HL      +   GG    P++                S + +P  A+ +  NT  L     PL     W ASVVP++++ W    P  R +   D  L+G+  YPTLG DRALAV G G + GWP+LV+D G+A   T AD
Sbjct:    9 LALAIGNSRLHWALFCDRILQVSWDTPHLNPIAAKELMDGGLSEHPNLSXXXXXXXXXXXXXXXSPNLWPKEATATLLNTKVL----PPL-----WIASVVPEQLQLWLAY-PRARAIALEDLPLSGL--YPTLGIDRALAVLGAGTKLGWPVLVIDAGTALTFTGAD 164          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: A0A352XBD7_9CYAN (Type III pantothenate kinase n=1 Tax=Cyanobacteria bacterium UBA11367 TaxID=2055774 RepID=A0A352XBD7_9CYAN)

HSP 1 Score: 89.7 bits (221), Expect = 6.720e-19
Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAES-----GGRG---VPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LAL++GNSRLHWA     N+   WDT+HL AE       GR    +P  +LP+      + Q P          LY+            ASVVP + + WK   P  + +T  D++  +  YPTLG DRALA+ GGGE +G+P+LV+D G+A   T AD
Sbjct:    6 LALIIGNSRLHWAWFMGTNLQETWDTNHLPAEIIDLLIQGRASSILPGELLPSVLVSNLESQIP----------LYI------------ASVVPAQTKLWKTY-PQTKIITL-DSIPLLGLYPTLGIDRALALLGGGETYGYPILVIDGGTALTFTGAD 140          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: UPI00036D7FD1 (pantothenate kinase n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00036D7FD1)

HSP 1 Score: 88.6 bits (218), Expect = 1.840e-18
Identity = 57/153 (37.25%), Postives = 73/153 (47.71%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPASFSFQ--NTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LAL VGN+RLHWA      +   WDT HL A +             AQ+    Q+ A    +     AL  +      T  W ASVVP++++ W               L G+  YPTLG DRALAV G G + GWP+LV+D G+A  LT A 
Sbjct:    9 LALSVGNTRLHWARFTGSTLEASWDTPHLPAPA-------------AQRLISAQFDAKVWLEVAGVAALPANAAHTPPTGLWVASVVPEQLQLWLSSPGATAIALDRVPLRGV--YPTLGIDRALAVWGAGTQLGWPVLVIDAGTALTLTGAS 146          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: A0A2T1G8T1_9CYAN (Type III pantothenate kinase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1G8T1_9CYAN)

HSP 1 Score: 88.6 bits (218), Expect = 3.220e-18
Identity = 60/162 (37.04%), Postives = 83/162 (51.23%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPH-------ILPNGAQQFSD---DQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGD-ALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            +AL +GNSRLHW +     +   WDT HL A++  R             +    +Q SD      PA+ +  N + L V   PL       ASVVP +   W+   P+VR +T    A+ GI  YPTLG DRALA+ G G + GWP+L++D G+A   T A+
Sbjct:   31 IALAIGNSRLHWGLFAGKTLEKTWDTEHLKADAVSRLCEAEKAEYLVETVMRSIEQISDRHIPDVPATTAVSNLHTLSVVPLPLVL-----ASVVPQQTAIWQSY-PEVRIMTLDQLAIGGI--YPTLGIDRALALLGAGNQLGWPILLIDAGTALTFTGAN 184          
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Match: UPI001682F2EB (Pantothenate kinase n=4 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001682F2EB)

HSP 1 Score: 87.8 bits (216), Expect = 3.600e-18
Identity = 59/152 (38.82%), Postives = 83/152 (54.61%), Query Frame = 1
Query:    1 LALMVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDDQYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLTSGDA-LAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD 453
            LALM+GNSRLHWA      +   WDT+HL A +  + +         Q+++    PA+       +L++S         + ASVVP +   W+   P V+ +T     L G+  YPTLG DRALA+ G GE FG+P+LV+D G+A  LT AD
Sbjct:    6 LALMIGNSRLHWAWFVGTTLQEAWDTNHLPASAVEQLI---------QRWASGILPAAILPPQLISLHLSN-TTSLLPLYVASVVPSQTTLWQTY-PAVKVITLAQVPLLGV--YPTLGIDRALALLGVGETFGYPVLVIDAGTALTLTGAD 144          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig157.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW81_ECTSI1.650e-3946.30Pantothenate kinase n=1 Tax=Ectocarpus siliculosus... [more]
UPI00034A64E21.170e-2040.54pantothenate kinase n=1 Tax=Baaleninema simplex Ta... [more]
K9SBT7_9CYAN7.550e-2045.39Type III pantothenate kinase n=1 Tax=Geitlerinema ... [more]
A0A0M1JXB6_9CYAN8.480e-2037.75Type III pantothenate kinase n=1 Tax=Planktothrico... [more]
A0A6I5QVB0_9CYAN2.240e-1937.25Type III pantothenate kinase n=1 Tax=Leptolyngbya ... [more]
A0A7C9Q1B8_9CYAN6.300e-1938.10Type III pantothenate kinase n=1 Tax=Oscillatoria ... [more]
A0A352XBD7_9CYAN6.720e-1938.99Type III pantothenate kinase n=1 Tax=Cyanobacteria... [more]
UPI00036D7FD11.840e-1837.25pantothenate kinase n=1 Tax=Oscillatoria sp. PCC 1... [more]
A0A2T1G8T1_9CYAN3.220e-1837.04Type III pantothenate kinase n=2 Tax=unclassified ... [more]
UPI001682F2EB3.600e-1838.82Pantothenate kinase n=4 Tax=unclassified Microcole... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig157contigP-wetherbeei_contig157:12103..13108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FW81
PFAMsPan_kinase
Model size453
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.7e-39
EggNOG OGsCOG1521@1|root,2SGJP@2759|Eukaryota
Ec32 ortholog descriptionType III pantothenate kinase
Ec32 orthologEc-01_003730.1
DescriptionType III pantothenate kinase
Cds size444
COG categoryK
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186064.5820973-UTR-P-wetherbeei_contig157:12102..121111683186064.5820973-UTR-P-wetherbeei_contig157:12102..12111Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig157 12103..12111 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186064.5948305-CDS-P-wetherbeei_contig157:12111..122641683186064.5948305-CDS-P-wetherbeei_contig157:12111..12264Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig157 12112..12264 +
1683186064.6045384-CDS-P-wetherbeei_contig157:12287..123411683186064.6045384-CDS-P-wetherbeei_contig157:12287..12341Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig157 12288..12341 +
1683186064.611739-CDS-P-wetherbeei_contig157:12389..125681683186064.611739-CDS-P-wetherbeei_contig157:12389..12568Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig157 12390..12568 +
1683186064.6191413-CDS-P-wetherbeei_contig157:13050..131081683186064.6191413-CDS-P-wetherbeei_contig157:13050..13108Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig157 13051..13108 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig157.11.1prot_P-wetherbeei_contig157.11.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig157 12112..13108 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig157.11.1

>prot_P-wetherbeei_contig157.11.1 ID=prot_P-wetherbeei_contig157.11.1|Name=mRNA_P-wetherbeei_contig157.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MVGNSRLHWAVLRDGNVVLQWDTSHLDAESGGRGVPPHILPNGAQQFSDD
QYPASFSFQNTNALYVSRGPLRFTRFWAASVVPDEMEKWKRRCPDVRQLT
SGDALAGIEHYPTLGSDRALAVRGGGERFGWPLLVVDCGSAPPLTAAD
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mRNA from alignment at P-wetherbeei_contig157:12103..13108+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig157.11.1 ID=mRNA_P-wetherbeei_contig157.11.1|Name=mRNA_P-wetherbeei_contig157.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1006bp|location=Sequence derived from alignment at P-wetherbeei_contig157:12103..13108+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCCTCATGGTTGGCAATAGCAGGCTGCACTGGGCCGTCTTGCGCGA TGGCAATGTCGTGCTTCAGTGGGATACGTCGCATCTGGACGCTGAAAGCG GCGGGCGGGGTGTGCCTCCACACATACTGCCGAACGGCGCTCAACAGTTT TCTGACGACCAAGTGCTGCGTGGGAGGTACTAAAGTATCCGGCCTCGTTT TCGTTCCAAAACACCAATGCTCTTTACGTTTCTCGGGGTGTTTTATTTTG GCAGCAAATACATGCAGTTCGTTTTCCGCTCATCCAGCCTTTGCGTTTTA CCAGGTTTTGGGCGGCCTCCGTGGTGCCGGACGAGATGGAGAAGTGGAAG AGGCGCTGTCCCGACGTCCGCCAATTAACCTCGGGCGATGCGCTGGCCGG AATCGAGCATTACCCGACACTCGGCAGCGACAGGGCGTTAGCGGTTCGCG GCGGCGGAGAGCGATTGTGAGTAAAATTGGAGATTTGTCCAGGATGTAAC CGGTCTGACCCATTGGGAAAAGTAGAGGATTCATGGGAGGTGTTCGGGGT GTGTGGAGTCGGCTTGTGCAATAGTAGAATTGGCAGTTCGGCAAAGCTTG TGAACAAATTTAGATCGATTGGCTGACGACCGTAATCAACATGTAATAGG AAGAAGAGAGAAGACTCGTTCCTCATTATTCCAATTGCAAAAGCTTGCCA AGGTCCATTTTCACTTTTCGACATGGAGGCGGTGATCGAGGAAGGCCTAA GGGTTGACCGCTTTTTAAACGTCAGCTCCGCGGGTCCACTAACTGAGCCG CACAATCCAATCCGGGTCCCGTTCGGCCTCGCTGTTCCGATCCTCTGTAC CTGGCCGCCACTTCCTGCCTCACCGCCACCGCTGCCACCTCCCTCCTGCC GCCGCCGCCTGCCGCCCCCGCCGCGCTCCCGCCGCCACCCTGCACCAGCG GCTGGCCGTTACTGGTCGTCGACTGCGGCAGCGCGCCCCCCCTCACCGCC GCCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig157:12103..13108+

>mRNA_P-wetherbeei_contig157.11.1 ID=mRNA_P-wetherbeei_contig157.11.1|Name=mRNA_P-wetherbeei_contig157.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig157:12103..13108+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTGGCAATAGCAGGCTGCACTGGGCCGTCTTGCGCGATGGCAATGT
CGTGCTTCAGTGGGATACGTCGCATCTGGACGCTGAAAGCGGCGGGCGGG
GTGTGCCTCCACACATACTGCCGAACGGCGCTCAACAGTTTTCTGACGAC
CAATATCCGGCCTCGTTTTCGTTCCAAAACACCAATGCTCTTTACGTTTC
TCGGGGTCCTTTGCGTTTTACCAGGTTTTGGGCGGCCTCCGTGGTGCCGG
ACGAGATGGAGAAGTGGAAGAGGCGCTGTCCCGACGTCCGCCAATTAACC
TCGGGCGATGCGCTGGCCGGAATCGAGCATTACCCGACACTCGGCAGCGA
CAGGGCGTTAGCGGTTCGCGGCGGCGGAGAGCGATTCGGCTGGCCGTTAC
TGGTCGTCGACTGCGGCAGCGCGCCCCCCCTCACCGCCGCCGAC
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