mRNA_P-wetherbeei_contig15696.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A835Z8Q9_9STRA (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q9_9STRA) HSP 1 Score: 351 bits (900), Expect = 1.190e-116 Identity = 167/210 (79.52%), Postives = 190/210 (90.48%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQT +GFQRFSRFEFP +LPAP NGIAAIL NNEMLT+ EK++FGIGLLPAILFGQ YVEECD +SV++WM+KQGVP+RVN+EVFIAMAKALNFIDPDNLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMADYV +GG V++++RL +I L D TV+ L++QGGET+EADVYVSAMPVD LKL+LP PW+
Sbjct: 134 WKSHSMIFAMPGQQTAEGFQRFSRFEFPQFLPAPINGIAAILMNNEMLTWPEKIRFGIGLLPAILFGQAYVEECDKLSVSEWMRKQGVPERVNEEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYVEQRGGSVLLEKRLSKIELNDDNTVKCLKLQGGETVEADVYVSAMPVDPLKLMLPEPWR 343
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: D8LPN3_ECTSI (Amine oxidase n=8 Tax=Phaeophyceae TaxID=2870 RepID=D8LPN3_ECTSI) HSP 1 Score: 350 bits (899), Expect = 5.270e-116 Identity = 167/210 (79.52%), Postives = 188/210 (89.52%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQT DGFQRFSRFEFP+ LPAP NG+ AIL NNEMLTF EK+QFGIGLLPAILFGQ+YVEECD+++V+QWMKKQGVPDRVNDEVFIAMAKALNFIDP+NLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMAD++ A+GG++ M+QR+ EILL D TV+GL+MQ G T+ AD YVS MPVD+LKL LP W+
Sbjct: 175 WKSHSMIFAMPGQQTADGFQRFSRFEFPALLPAPLNGLVAILLNNEMLTFPEKIQFGIGLLPAILFGQKYVEECDSLTVSQWMKKQGVPDRVNDEVFIAMAKALNFIDPENLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISEILLNDDKTVKGLKMQDGSTVVADAYVSTMPVDILKLALPEAWR 384
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A2H4YKI9_9PHAE (Amine oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2H4YKI9_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.830e-115 Identity = 165/210 (78.57%), Postives = 186/210 (88.57%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQT DGFQRFSRFEFP LPAP NG+ AIL NNEMLTF EK+QFGIGL+PAILFGQ+YVEECD+++V +WMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMAD++ A+GG++ M QR+ +I+L D TV+GL+MQ G +EAD YVS MPVD+LKL+LP WK
Sbjct: 171 WKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMNQRISKIMLNDDKTVKGLKMQDGSMVEADAYVSTMPVDILKLMLPDEWK 380
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A2H4YKJ7_9PHAE (Amine oxidase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2H4YKJ7_9PHAE) HSP 1 Score: 348 bits (893), Expect = 4.350e-115 Identity = 165/210 (78.57%), Postives = 187/210 (89.05%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQTEDGFQRFSRF+FP+ LPAP NG+ AIL NN+ML+F EK+QFGIGL+PAILFGQ+YVEECD ++V +WMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMADY+ A+GG++ MKQR+ +IL+ D TV+GL+MQ G +EAD YVS MPVD LKL+LP WK
Sbjct: 176 WKSHSMIFAMPGQQTEDGFQRFSRFDFPALLPAPLNGLVAILLNNDMLSFPEKLQFGIGLIPAILFGQRYVEECDELTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLARGGELRMKQRISKILVHDDKTVKGLQMQDGSIVEADAYVSTMPVDPLKLMLPEEWK 385
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A2H4YKK3_9PHAE (Amine oxidase n=6 Tax=Sargassum TaxID=3015 RepID=A0A2H4YKK3_9PHAE) HSP 1 Score: 347 bits (889), Expect = 1.470e-114 Identity = 165/210 (78.57%), Postives = 184/210 (87.62%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQT DGFQRFSRF+FP LPAP NG+ AIL NNEMLTF EK+QFGIGL+PAILFGQ+YVEECD+++V +WM KQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMAD++ A+GG++ M QR+ ILL D TVRGL+MQ G +EAD YVS MPVDVLKL+LP W+
Sbjct: 169 WKSHSMIFAMPGQQTADGFQRFSRFDFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMTKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMIARGGELRMNQRISSILLNDDKTVRGLKMQDGSMVEADAYVSTMPVDVLKLMLPEEWR 378
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A2H4YKJ4_SACJA (Amine oxidase n=2 Tax=Laminariales TaxID=2886 RepID=A0A2H4YKJ4_SACJA) HSP 1 Score: 347 bits (889), Expect = 1.550e-114 Identity = 164/210 (78.10%), Postives = 186/210 (88.57%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQQT DGFQRFSRFEFP LPAP NG+ AIL NNEMLTF EK+QFGIGL+PAILFGQ+YVEECD+++V +WM KQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMAD++ A+GG++ M+QR+ ++LL D TV+GL+MQ G T+ AD YVS MPVDVLKL+LP W+
Sbjct: 172 WKSHSMIFAMPGQQTADGFQRFSRFEFPDLLPAPLNGLVAILLNNEMLTFPEKIQFGIGLIPAILFGQKYVEECDSLTVTEWMAKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADHMLARGGELRMEQRISQVLLNDDKTVKGLKMQDGSTVVADAYVSTMPVDVLKLMLPDEWR 381
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A2H4YKJ3_9PHAE (Amine oxidase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2H4YKJ3_9PHAE) HSP 1 Score: 334 bits (857), Expect = 1.030e-109 Identity = 161/210 (76.67%), Postives = 180/210 (85.71%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WKSHSMIFAMPGQ+T +GFQRFSRFEF LPAP NG+ AIL N EMLT TEK+QFGIGL+PAILFGQ+YVEECD ++V +WMKKQGVPDRVNDEVFIAMAKALNFIDP NLSMTVVL ALNRFLQETHGSKMAFLDGPPPTRLC PMADY+ AKGG++ QR+ ILL D TV+GL+M+ G +EAD YVS MPVDVLKL+LP W+
Sbjct: 172 WKSHSMIFAMPGQKTAEGFQRFSRFEFTDLLPAPLNGLVAILLNTEMLTLTEKIQFGIGLIPAILFGQKYVEECDCLTVTEWMKKQGVPDRVNDEVFIAMAKALNFIDPGNLSMTVVLTALNRFLQETHGSKMAFLDGPPPTRLCQPMADYMLAKGGELRTNQRVATILLNGDQTVKGLQMRDGSLVEADAYVSTMPVDVLKLMLPDQWR 381
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A250XPT4_9CHLO (Phytoene dehydrogenase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XPT4_9CHLO) HSP 1 Score: 296 bits (759), Expect = 4.440e-95 Identity = 144/210 (68.57%), Postives = 172/210 (81.90%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPWK 630
WK HSMIFAMP E FSRF+FP LPAP+NGI AILRNN+ML++ EK+QF IGLLPAI+FGQ+YVEE D ++V QWM+KQGVPDRVNDEVFIAMAKALNFI+PD LSMTVVL ALNRFLQE HGSKMAFLDG PP RLC PM DY TA+GGQ++M R+++I+L DG+V+ + G+T+E D Y+SAMPVD++KLL+P PWK
Sbjct: 143 WKEHSMIFAMPNLPGE-----FSRFDFPE-LPAPWNGIIAILRNNQMLSWPEKIQFAIGLLPAIIFGQKYVEEQDELTVTQWMRKQGVPDRVNDEVFIAMAKALNFINPDELSMTVVLTALNRFLQEQHGSKMAFLDGAPPERLCQPMVDYFTARGGQIMMNARVKDIVLNPDGSVKHYALTNGQTVEGDFYMSAMPVDIVKLLVPEPWK 346
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A8J9RDM2_9CHLO (15-cis-phytoene desaturase, chloroplastic/chromoplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RDM2_9CHLO) HSP 1 Score: 295 bits (756), Expect = 1.250e-94 Identity = 146/212 (68.87%), Postives = 170/212 (80.19%), Query Frame = 1
Query: 1 WKSHSMIFA---MPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPW 627
WK HSMIFA +PGQ FSRF+FP+WLPAP+NGI AILRNN+MLT+ EK++F IGLLPAI+FGQ+YVEE D+ +V +WM KQGVP RVNDEVFIAMAKALNFI+PD LSMT +LIALNRFLQETHGSKMAFLDG PP RLC PM DY AKGG+ R+Q+ILL +DG V G ++ G T++AD+YVSAMPVD LKLLLP PW
Sbjct: 160 WKEHSMIFASRDIPGQ--------FSRFDFPAWLPAPWNGILAILRNNDMLTWPEKIRFAIGLLPAIIFGQKYVEEQDDKTVTEWMDKQGVPRRVNDEVFIAMAKALNFINPDELSMTCILIALNRFLQETHGSKMAFLDGAPPERLCQPMVDYFLAKGGEFRYNARVQKILLGSDGRVDGFQLTNGSTVKADLYVSAMPVDPLKLLLPEPW 363
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Match: A0A383V3D0_TETOB (Phytoene dehydrogenase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V3D0_TETOB) HSP 1 Score: 294 bits (752), Expect = 4.360e-94 Identity = 145/209 (69.38%), Postives = 170/209 (81.34%), Query Frame = 1
Query: 1 WKSHSMIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQFGIGLLPAILFGQQYVEECDNMSVAQWMKKQGVPDRVNDEVFIAMAKALNFIDPDNLSMTVVLIALNRFLQETHGSKMAFLDGPPPTRLCAPMADYVTAKGGQVVMKQRLQEILLAADGTVRGLRMQGGETMEADVYVSAMPVDVLKLLLPAPW 627
WK HSMIFAMP E FSRF+FP +PAPFNGI AIL NN+MLT+ EK+QF +GLLPAI+ GQ+YVE+ D ++V +WM++QGVP+RVNDEVFIAMAKALNFIDPD+LSMTVVL ALNRFLQE HGSKMAFLDG PP RLC P+ DY TAKGGQ+ M RL+EI L ADG+V+ L M GET+E D+YVSAMPVD++KLL P PW
Sbjct: 161 WKEHSMIFAMPDSPGE-----FSRFDFPD-IPAPFNGIFAILANNQMLTWPEKIQFALGLLPAIVGGQKYVEDQDKLTVTEWMRQQGVPNRVNDEVFIAMAKALNFIDPDDLSMTVVLTALNRFLQEKHGSKMAFLDGAPPERLCQPLVDYFTAKGGQIRMNARLKEIKLNADGSVKELAMVNGETIEGDLYVSAMPVDIMKLLTPEPW 363 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15696.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15696.1.1 >prot_P-wetherbeei_contig15696.1.1 ID=prot_P-wetherbeei_contig15696.1.1|Name=mRNA_P-wetherbeei_contig15696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp MIFAMPGQQTEDGFQRFSRFEFPSWLPAPFNGIAAILRNNEMLTFTEKVQback to top mRNA from alignment at P-wetherbeei_contig15696:181..1224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15696.1.1 ID=mRNA_P-wetherbeei_contig15696.1.1|Name=mRNA_P-wetherbeei_contig15696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1044bp|location=Sequence derived from alignment at P-wetherbeei_contig15696:181..1224+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15696:181..1224+ >mRNA_P-wetherbeei_contig15696.1.1 ID=mRNA_P-wetherbeei_contig15696.1.1|Name=mRNA_P-wetherbeei_contig15696.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig15696:181..1224+ (Phaeothamnion wetherbeei SAG_119_79)back to top |