mRNA_P-wetherbeei_contig15674.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15674.1.1
Unique NamemRNA_P-wetherbeei_contig15674.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: UPI0019A3AE96 (Uncharacterized protein n=2 Tax=Polaromonas eurypsychrophila TaxID=1614635 RepID=UPI0019A3AE96)

HSP 1 Score: 597 bits (1538), Expect = 4.150e-213
Identity = 312/370 (84.32%), Postives = 340/370 (91.89%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MA+IV IDDDETIR LI AALRFEGYEV EA++GA+GLALVRD RPDLVVSDVNMPVMDGF+M+Q LRADPSIQ TPVILLTSLQEREH+R+GM+SGADDYLTKPLVFDELR+A A QLNK LMRQ+AQA+A GTAIDAALQ Q+K+LS LYE +LLAEL EKWP+A+S +EDQKFANATVLFVDVVNF ALAEKLSSTELS VVR+FYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVN+GLRAT+AALGLI SA RVQGFLAS FP RSLPRFEV VGLNSGAVTLA+LQD LRGKSQILPVGD VSAS+LLQK+A++ GWKIAASATLLREVAGAVK GRRKRFSLP RSSA+D  ELLGL+
Sbjct:    1 MAMIVAIDDDETIRALIAAALRFEGYEVMEAEDGAAGLALVRDYRPDLVVSDVNMPVMDGFSMLQTLRADPSIQATPVILLTSLQEREHMRSGMSSGADDYLTKPLVFDELRDAVATQLNKHLMRQTAQAQAVGTAIDAALQEQKKRLSRLYEEKLLAELSEKWPSADSLVEDQKFANATVLFVDVVNFPALAEKLSSTELSEVVREFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNNGLRATKAALGLITSAQRVQGFLASHFPGRSLPRFEVSVGLNSGAVTLAKLQDALRGKSQILPVGDTVSASMLLQKEANKAGWKIAASATLLREVAGAVKIGRRKRFSLPERSSALDGIELLGLA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: UPI0019B6CB9A (Response regulator n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019B6CB9A)

HSP 1 Score: 592 bits (1526), Expect = 2.790e-211
Identity = 312/370 (84.32%), Postives = 337/370 (91.08%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MALIV IDDDETIR LI AALRFEGY V EADNGA+GLA+VR  RPDLVVSDVNMP MDGFAM+ ALRADPSIQ TPVILLTSLQEREHVR+GMTSGADDYLTKP+VFD+LRE+ A QLNKQLMRQSAQA+ATGTAI AAL +Q+KQLS LYE +LL+EL +KWPTAESA+ED KFANA VLFVDVVNF+AL EKL+STELS VVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDT+TVNS LRATRAALGLI++A RVQ FL + FP R+LPRFEV VGLNSGAVTLARL+DPLRGKSQILPVGD VSASLLLQKQAHQ GWKIAASA+LLREVAG+VKTGRRK FSL GRSSA+DA ELLGLS
Sbjct:    1 MALIVAIDDDETIRELIAAALRFEGYRVLEADNGAAGLAMVRAHRPDLVVSDVNMPEMDGFAMLHALRADPSIQATPVILLTSLQEREHVRSGMTSGADDYLTKPIVFDDLRESAAAQLNKQLMRQSAQAKATGTAIAAALDTQKKQLSRLYEKKLLSELVDKWPTAESAVEDCKFANAAVLFVDVVNFAALTEKLNSTELSAVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTETVNSSLRATRAALGLIDAAQRVQSFLVNHFPGRTLPRFEVSVGLNSGAVTLARLEDPLRGKSQILPVGDTVSASLLLQKQAHQAGWKIAASASLLREVAGSVKTGRRKHFSLAGRSSAMDAAELLGLS 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: A0A1S8FMT5_9BURK (Histidine kinase n=1 Tax=Polaromonas sp. A23 TaxID=1944133 RepID=A0A1S8FMT5_9BURK)

HSP 1 Score: 590 bits (1520), Expect = 2.280e-210
Identity = 306/370 (82.70%), Postives = 336/370 (90.81%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MALI VIDDDETIR LI AALRFEGYEV EADNGA+GLA+VR+ RPDLVVSDVNMP MDGFAM+QALRADP++Q TP+ILLTSLQEREHVR+GMTSGADDYLTKP+VFDELREATA QLNKQLMRQSAQA+ATG AI  AL SQ+KQL  LYE RLLAELGEKWPTA+S +ED+KF+NATVLFVDVVNF+ALAEKL+S+ELS VV QFYNNAGDTVYLFGA+HMQFVGEGLLAVFVDS DTDTVNSGLRA RAALGL++SAHRVQG+L + F  R+LPRFEVCV L+SGAVTLA+L DPLRGKSQ+LPVGD VSA LLLQKQAH  GWKIAASA L REVA AV+TGRRKRFSLPGR+SA+DA ELLGLS
Sbjct:    1 MALIAVIDDDETIRELIAAALRFEGYEVVEADNGAAGLAMVREHRPDLVVSDVNMPEMDGFAMMQALRADPAVQATPIILLTSLQEREHVRSGMTSGADDYLTKPIVFDELREATAAQLNKQLMRQSAQAQATGAAIATALSSQKKQLIRLYEQRLLAELGEKWPTADSVVEDRKFSNATVLFVDVVNFAALAEKLTSSELSEVVHQFYNNAGDTVYLFGAHHMQFVGEGLLAVFVDSADTDTVNSGLRAARAALGLVDSAHRVQGYLVNHFSGRTLPRFEVCVALHSGAVTLAKLDDPLRGKSQLLPVGDTVSACLLLQKQAHAAGWKIAASAALQREVASAVQTGRRKRFSLPGRTSAMDAAELLGLS 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: A0A258NYI3_9BURK (Histidine kinase n=3 Tax=unclassified Polaromonas TaxID=2638319 RepID=A0A258NYI3_9BURK)

HSP 1 Score: 553 bits (1425), Expect = 6.610e-196
Identity = 290/370 (78.38%), Postives = 321/370 (86.76%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MALIVVIDDDE IR LI AALRFEGYEV EADNGA+GLALVR   PDLVVSDVNMPVMDGFAM+QALR DP+IQ TPVILLTSLQER HVRTGMTSGADDYLTKPLVF+EL  ATA QLNKQLMRQS Q +A G AI  AL+ QEK+L  LYE R+LAEL +KWP+AE+ + D +F++A+VLFVDVVNF ALAEKLSSTELS VVR+FY NAGDT+YLFG +HMQFVGEGLLAVFVDSTDTDTVN GLRATRAALGLI++A RVQGFL S F  RSLPRFE+ VGLNSG VTLA+L+DPL G +Q+LPVGD VS +L LQKQA   GWKIAASATLLREVAGAVKTGRRKRFSLPGRS A+D TE+LG++
Sbjct:    1 MALIVVIDDDEAIRTLIAAALRFEGYEVAEADNGAAGLALVRGNAPDLVVSDVNMPVMDGFAMLQALRNDPAIQATPVILLTSLQERAHVRTGMTSGADDYLTKPLVFEELLAATATQLNKQLMRQSVQEQAVGAAIGQALREQEKKLGSLYEKRMLAELADKWPSAETLVADHRFSSASVLFVDVVNFPALAEKLSSTELSEVVREFYKNAGDTLYLFGVFHMQFVGEGLLAVFVDSTDTDTVNHGLRATRAALGLIDAAQRVQGFLLSHFSGRSLPRFEISVGLNSGPVTLAKLEDPLWGNAQVLPVGDSVSTTLQLQKQATSAGWKIAASATLLREVAGAVKTGRRKRFSLPGRSGAVDGTEVLGIA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: A0A1S8FIH7_9BURK (Histidine kinase n=3 Tax=unclassified Polaromonas TaxID=2638319 RepID=A0A1S8FIH7_9BURK)

HSP 1 Score: 470 bits (1210), Expect = 3.410e-163
Identity = 247/370 (66.76%), Postives = 294/370 (79.46%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            M LIVV++DD   R L+ + LR +GY+V  ADNG +GL LVR  +PDLV+SDV MPVMDGF+M+QALRADP+I  TPV+LLTSLQER H+R GMTSGADDY+TKP    ELREA A QLNK+ M+ + Q  A   A+ AAL+ Q++QL+ LYE +L AEL EKWP A++  +D+KF+NATVLFVDV+N++ LAEKLSS++LS VVRQFY NAGDTV+LFGA HMQFVGEGLL VFVD+TDT +VN GLRA RAALGLI+SA RVQ FL SRFP   LPRF+V V LNSG V LA+L+DPLRG   ILPVGD VSA+LLLQKQA + GW+IAAS T+LR V GAV TG R    LPGRS+AIDA ELLGL+
Sbjct:    1 MPLIVVMEDDAATRTLVASVLRKDGYDVLSADNGLAGLELVRQNKPDLVISDVQMPVMDGFSMLQALRADPAILATPVVLLTSLQERAHMRIGMTSGADDYITKPFRPGELREAAAAQLNKRHMQAAVQDMAVEAAVQAALEDQKQQLARLYEKKLAAELSEKWPAADATSQDEKFSNATVLFVDVLNYAGLAEKLSSSDLSDVVRQFYTNAGDTVHLFGARHMQFVGEGLLVVFVDATDTTSVNHGLRAARAALGLIDSAKRVQQFLNSRFPGHDLPRFDVSVALNSGPVALAKLEDPLRGGVHILPVGDTVSATLLLQKQACKAGWQIAASITMLRGVTGAVNTGGRALLPLPGRSAAIDAAELLGLA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: UPI001665FE2B (response regulator n=2 Tax=Polaromonas TaxID=52972 RepID=UPI001665FE2B)

HSP 1 Score: 466 bits (1198), Expect = 2.360e-161
Identity = 244/370 (65.95%), Postives = 290/370 (78.38%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            M LIV+++DD   R L+ + LR +GYEV  ADNG SGL LVR  +PDLV+SDV MP+MDGFAM+QALRADP+I   PVILLTSLQER H+R GMTSGADDY+TKP    ELREA A QLNK+ M+ + Q  A   A+ AAL  Q+  LS LYE +L +EL +KWP A++A ED+KF+NA+VLFVDV+N++ LAEKLSSTELS VVRQFYNNAGDTV+LFGA HMQFVGEGLL VFVDSTDT +VN GLRA RAALGL+++A RVQ FL S+FP   LPRF+V V LNSG V LA+L+DPL G   +LPVGD VS +LLLQKQA + GWKIAAS  +LR V GAV TG R   SLPGR++A+DA ELLGL+
Sbjct:    1 MPLIVLMEDDAATRTLVASVLRKDGYEVLSADNGVSGLELVRQNKPDLVISDVQMPLMDGFAMLQALRADPAIMTIPVILLTSLQERAHMRIGMTSGADDYITKPFRPGELREAAAAQLNKREMQAALQTMAVEAAVQAALVDQKHHLSRLYEEKLASELSDKWPAADAASEDEKFSNASVLFVDVLNYAGLAEKLSSTELSDVVRQFYNNAGDTVHLFGARHMQFVGEGLLVVFVDSTDTSSVNHGLRAARAALGLVDAAKRVQKFLNSQFPAYGLPRFDVSVALNSGPVALAKLEDPLHGGIHVLPVGDTVSVTLLLQKQASKAGWKIAASVAMLRGVTGAVNTGARALISLPGRTAALDAAELLGLA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: UPI0019A2D09D (Response regulator n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=UPI0019A2D09D)

HSP 1 Score: 440 bits (1131), Expect = 3.300e-151
Identity = 231/370 (62.43%), Postives = 285/370 (77.03%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MALIV+++DD   R L+ + L+ +GY+V  ADNG  GLALVR+ +PDLV+SD+ MP MDGFAM+QALRAD ++   PVILLTSL ER H+R GMTSGADDY+TKP    ELREA A QLN++ MR+ AQA A   A+  ALQ Q+ +LS LYE++L AEL EKWPT E+   D+ FA+ATVLFVDV+N++ALAEKL++ ELS +VR+FY+NAGDTV+LFGA HMQFVGEGLLAVFVDSTDT +VN GLRA RAALGL+++A RV  ++ S+F  RS P F V   L+SG VTLA+L DPL G+ QILPVGD V+++LLLQKQA   GW I AS  +LR V GAVKTG R   +LPGRS  +DA ELL L+
Sbjct:    1 MALIVLMEDDAATRTLVASVLKKDGYQVIAADNGLDGLALVREHKPDLVISDIQMPGMDGFAMLQALRADAAVSAIPVILLTSLLERAHMRIGMTSGADDYITKPFRPGELREAAAAQLNRRQMREVAQASAVDAAVVVALQEQKHRLSRLYESKLAAELSEKWPTEEAGSADEHFASATVLFVDVLNYAALAEKLTTEELSDIVRKFYSNAGDTVHLFGARHMQFVGEGLLAVFVDSTDTVSVNHGLRAARAALGLVDAAKRVHSYVQSQFSARSQPPFAVSAALHSGPVTLAKLHDPLHGEVQILPVGDAVNSTLLLQKQAAHAGWTIVASVPMLRSVTGAVKTGSRALITLPGRSMPMDAAELLSLA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: A0A4V1ZMY8_9BURK (Adenylate/guanylate cyclase domain-containing response regulator n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4V1ZMY8_9BURK)

HSP 1 Score: 438 bits (1127), Expect = 1.340e-150
Identity = 227/370 (61.35%), Postives = 289/370 (78.11%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            M+LIV+++DD   R L+ + L+ +GYEV  A+NGA+GL LVR+ RPDLV+SDV MPVMDGFAM+QALR + ++   PVILLTSLQER H+R GMTSGADDY+TKP    ELREA A QLNK+ M  + Q+ A   A+ AAL+ Q+ QL++LYE +L AEL EKWP AE+  ED+KFA+AT+LFVDV N++A A+KL++ +LS VVR+FYNNAGDTV+LFGA HMQFVGE LLAVFVDSTDT +VN GLRA R+ALG++++A RVQ +L ++FP  +LP F+V V L+SG V LA+LQDPL G+ +ILPVGDVV+++LLLQKQA  +GW I AS  +LR V G V+TG R    LPGRS  +DA ELL L+
Sbjct:    1 MSLIVLMEDDAATRTLVASVLKKDGYEVLAAENGAAGLDLVREHRPDLVISDVQMPVMDGFAMLQALRGEKALLSIPVILLTSLQERAHMRIGMTSGADDYITKPFRPGELREAAAAQLNKRKMHAAVQSLAVDAAVTAALEEQKHQLAKLYERKLAAELSEKWPVAEAGSEDEKFASATLLFVDVQNYAAFAQKLNTEDLSHVVRKFYNNAGDTVHLFGARHMQFVGEALLAVFVDSTDTQSVNHGLRAARSALGMVDAAKRVQKYLETQFPHHALPEFQVSVALHSGPVALAKLQDPLHGEVRILPVGDVVNSTLLLQKQAGAMGWTIIASVPMLRGVTGGVRTGARALVPLPGRSMPMDAAELLSLA 370          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: A0A519J4U4_9GAMM (Response regulator n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A519J4U4_9GAMM)

HSP 1 Score: 405 bits (1041), Expect = 1.560e-137
Identity = 212/371 (57.14%), Postives = 276/371 (74.39%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGK-SQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            MALIVV++DD   R LI + LR +G+EV  A+NG  GL LV+  RPDLV+SDV MP+++GF M+ A+R D SI  TPVILLTSLQER H+R GM +GADDY+TKP    ELREA A QLNK++M+ + Q  A   A+  ALQ Q+ QL++LYE RL AEL E+WP+ + A +D++F++ATVLFVD+ ++ ++AE+L++ EL+ +V++FY +A DTV LFGA H+QFVGEGLLA+F DSTDT TV+ GLRA RAALGLI S   +Q +L + +PDR LP+FEV V L++G VTL  LQDPL G  SQ LPVGD VSA++LLQKQ   + W + AS T LR V GAV+TGRR    LPGR++  DA E+ GL+
Sbjct:    1 MALIVVMEDDAGTRMLIASVLRKDGHEVLTAENGEQGLGLVKTKRPDLVISDVQMPLLNGFQMLAAVRQDASIAATPVILLTSLQERAHMRIGMNTGADDYITKPFRPAELREAAAAQLNKRVMQATLQGMAVDAAVQVALQKQKDQLAKLYEQRLAAELSERWPSGDGAEDDERFSSATVLFVDIPSYGSVAEELNANELTELVKKFYGSANDTVLLFGARHIQFVGEGLLAIFADSTDTRTVSHGLRAVRAALGLIESGRGIQKYLEALYPDRQLPKFEVNVALHAGPVTLTVLQDPLHGHASQSLPVGDAVSATMLLQKQGRVLQWPVLASMTALRPVTGAVRTGRRSMVDLPGRTAPFDAAEVTGLA 371          
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Match: UPI001FADD9FF (response regulator n=1 Tax=Variovorax sp. CYS-02 TaxID=2923278 RepID=UPI001FADD9FF)

HSP 1 Score: 399 bits (1026), Expect = 2.940e-135
Identity = 211/371 (56.87%), Postives = 274/371 (73.85%), Query Frame = 1
Query:    1 MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVVSDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADDYLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSELYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTELSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRATRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPLRGK-SQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRKRFSLPGRSSAIDATELLGLS 1110
            M +IVV++DD   R L+ + L+ +GY V  A++G  GL LV   RP L++SDV MP M+GF M+ A+R +P I  TPVILLTSLQER H+R GM +GADDY+TKP    ELREA A QLNK+ M+ + Q+ A G A+  AL+ Q+ +L++LYE RL  EL ++WP  +    D++F  ATVLF D+++++ALAE+LS  ELS +V++FY +AGDTV+LFGA +MQFVGEG+LAVFVDSTDT +VN GLRA RAALGL++SAHR++ FL + F    LPRF+V V L+SGAVTL RLQDPL    +Q LPVGD VSA++LLQKQA   GW IAAS ++LR V GAV+TG R    LPGRS+ +DA EL GL+
Sbjct:    1 MPMIVVMEDDAGTRMLVASVLKKDGYIVLTAEDGEQGLKLVEQHRPALIISDVQMPGMNGFQMLAAVRQNPLISATPVILLTSLQERGHMRLGMNTGADDYITKPFRPGELREAAAAQLNKRAMQAALQSMAVGAAVQTALEDQKHKLAKLYEQRLAKELSDRWPAGDGNSGDERFEQATVLFADMLHYAALAEQLSPAELSDLVKRFYGSAGDTVHLFGARYMQFVGEGMLAVFVDSTDTKSVNHGLRAARAALGLVDSAHRMRLFLRTHFAGHELPRFDVSVALHSGAVTLTRLQDPLHDTMAQTLPVGDAVSATMLLQKQAPAHGWAIAASVSMLRGVTGAVRTGGRALIELPGRSAPLDAAELTGLA 371          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15674.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019A3AE964.150e-21384.32Uncharacterized protein n=2 Tax=Polaromonas euryps... [more]
UPI0019B6CB9A2.790e-21184.32Response regulator n=1 Tax=Polaromonas sp. TaxID=1... [more]
A0A1S8FMT5_9BURK2.280e-21082.70Histidine kinase n=1 Tax=Polaromonas sp. A23 TaxID... [more]
A0A258NYI3_9BURK6.610e-19678.38Histidine kinase n=3 Tax=unclassified Polaromonas ... [more]
A0A1S8FIH7_9BURK3.410e-16366.76Histidine kinase n=3 Tax=unclassified Polaromonas ... [more]
UPI001665FE2B2.360e-16165.95response regulator n=2 Tax=Polaromonas TaxID=52972... [more]
UPI0019A2D09D3.300e-15162.43Response regulator n=1 Tax=Polaromonas sp. TaxID=1... [more]
A0A4V1ZMY8_9BURK1.340e-15061.35Adenylate/guanylate cyclase domain-containing resp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15674contigP-wetherbeei_contig15674:94..1209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog365044.Pnap_0436
PFAMsResponse_reg
Model size1116
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.06e-114
EggNOG OGsCOG0745@1|root,COG0745@2|Bacteria,1NE9G@1224|Proteobacteria,2VW7G@28216|Betaproteobacteria,4AHT0@80864|Comamonadaceae
DescriptioncheY-homologous receiver domain
Cds size1116
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186063.7724304-CDS-P-wetherbeei_contig15674:93..12091683186063.7724304-CDS-P-wetherbeei_contig15674:93..1209Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15674 94..1209 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15674.1.1prot_P-wetherbeei_contig15674.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15674 94..1209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15674.1.1

>prot_P-wetherbeei_contig15674.1.1 ID=prot_P-wetherbeei_contig15674.1.1|Name=mRNA_P-wetherbeei_contig15674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=372bp
MALIVVIDDDETIRGLITAALRFEGYEVREADNGASGLALVRDCRPDLVV
SDVNMPVMDGFAMVQALRADPSIQGTPVILLTSLQEREHVRTGMTSGADD
YLTKPLVFDELREATAVQLNKQLMRQSAQARATGTAIDAALQSQEKQLSE
LYETRLLAELGEKWPTAESAMEDQKFANATVLFVDVVNFSALAEKLSSTE
LSTVVRQFYNNAGDTVYLFGAYHMQFVGEGLLAVFVDSTDTDTVNSGLRA
TRAALGLINSAHRVQGFLASRFPDRSLPRFEVCVGLNSGAVTLARLQDPL
RGKSQILPVGDVVSASLLLQKQAHQVGWKIAASATLLREVAGAVKTGRRK
RFSLPGRSSAIDATELLGLSQ*
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mRNA from alignment at P-wetherbeei_contig15674:94..1209+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15674.1.1 ID=mRNA_P-wetherbeei_contig15674.1.1|Name=mRNA_P-wetherbeei_contig15674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig15674:94..1209+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTTTGATAGTGGTCATCGATGATGACGAGACGATACGGGGTCTGAT TACCGCCGCGTTGCGCTTCGAAGGTTACGAGGTACGGGAGGCGGACAACG GCGCCTCCGGACTGGCACTGGTGCGGGACTGTCGGCCCGACCTGGTCGTC AGCGACGTCAATATGCCGGTGATGGACGGCTTCGCCATGGTGCAGGCGCT GCGTGCCGACCCGTCCATCCAGGGCACGCCGGTGATCCTGCTGACCTCGC TGCAGGAGCGCGAACATGTGCGCACCGGCATGACCAGCGGGGCCGACGAC TACCTGACGAAGCCACTGGTCTTCGACGAGTTGCGCGAGGCCACCGCCGT CCAGCTCAACAAGCAGCTGATGCGCCAGTCTGCCCAGGCCCGGGCGACGG GAACAGCGATTGACGCCGCACTGCAGAGTCAGGAAAAACAGTTGAGCGAG CTGTATGAGACCAGACTGCTGGCCGAGCTGGGCGAAAAATGGCCGACGGC CGAGTCGGCAATGGAAGACCAGAAATTTGCCAACGCCACGGTGCTGTTTG TCGATGTGGTCAATTTTTCGGCCCTGGCCGAAAAACTCTCCAGCACCGAG CTGAGCACGGTCGTGCGCCAGTTCTACAACAACGCCGGTGATACCGTCTA CCTGTTCGGCGCCTACCACATGCAGTTTGTCGGTGAAGGCCTGCTGGCCG TGTTTGTTGACAGCACCGACACGGACACTGTCAACAGCGGCCTGCGGGCC ACCCGGGCCGCGCTGGGGCTGATCAACTCGGCGCATCGGGTGCAAGGCTT TTTGGCCAGCCGTTTTCCCGACCGTTCACTGCCGCGTTTCGAGGTCTGCG TGGGTCTGAACAGCGGCGCCGTGACGCTGGCGAGACTGCAGGATCCGCTG CGCGGAAAATCCCAGATCCTGCCGGTCGGCGACGTGGTCAGCGCCAGCTT GCTGCTGCAAAAACAGGCGCATCAGGTCGGCTGGAAAATTGCCGCCAGCG CCACGCTGCTGCGCGAAGTGGCGGGCGCCGTGAAAACTGGCCGGCGCAAG CGCTTTTCCCTGCCCGGGCGCAGCAGCGCCATCGACGCGACGGAACTGCT GGGCCTGTCGCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15674:94..1209+

>mRNA_P-wetherbeei_contig15674.1.1 ID=mRNA_P-wetherbeei_contig15674.1.1|Name=mRNA_P-wetherbeei_contig15674.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1116bp|location=Sequence derived from alignment at P-wetherbeei_contig15674:94..1209+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTTTGATAGTGGTCATCGATGATGACGAGACGATACGGGGTCTGAT
TACCGCCGCGTTGCGCTTCGAAGGTTACGAGGTACGGGAGGCGGACAACG
GCGCCTCCGGACTGGCACTGGTGCGGGACTGTCGGCCCGACCTGGTCGTC
AGCGACGTCAATATGCCGGTGATGGACGGCTTCGCCATGGTGCAGGCGCT
GCGTGCCGACCCGTCCATCCAGGGCACGCCGGTGATCCTGCTGACCTCGC
TGCAGGAGCGCGAACATGTGCGCACCGGCATGACCAGCGGGGCCGACGAC
TACCTGACGAAGCCACTGGTCTTCGACGAGTTGCGCGAGGCCACCGCCGT
CCAGCTCAACAAGCAGCTGATGCGCCAGTCTGCCCAGGCCCGGGCGACGG
GAACAGCGATTGACGCCGCACTGCAGAGTCAGGAAAAACAGTTGAGCGAG
CTGTATGAGACCAGACTGCTGGCCGAGCTGGGCGAAAAATGGCCGACGGC
CGAGTCGGCAATGGAAGACCAGAAATTTGCCAACGCCACGGTGCTGTTTG
TCGATGTGGTCAATTTTTCGGCCCTGGCCGAAAAACTCTCCAGCACCGAG
CTGAGCACGGTCGTGCGCCAGTTCTACAACAACGCCGGTGATACCGTCTA
CCTGTTCGGCGCCTACCACATGCAGTTTGTCGGTGAAGGCCTGCTGGCCG
TGTTTGTTGACAGCACCGACACGGACACTGTCAACAGCGGCCTGCGGGCC
ACCCGGGCCGCGCTGGGGCTGATCAACTCGGCGCATCGGGTGCAAGGCTT
TTTGGCCAGCCGTTTTCCCGACCGTTCACTGCCGCGTTTCGAGGTCTGCG
TGGGTCTGAACAGCGGCGCCGTGACGCTGGCGAGACTGCAGGATCCGCTG
CGCGGAAAATCCCAGATCCTGCCGGTCGGCGACGTGGTCAGCGCCAGCTT
GCTGCTGCAAAAACAGGCGCATCAGGTCGGCTGGAAAATTGCCGCCAGCG
CCACGCTGCTGCGCGAAGTGGCGGGCGCCGTGAAAACTGGCCGGCGCAAG
CGCTTTTCCCTGCCCGGGCGCAGCAGCGCCATCGACGCGACGGAACTGCT
GGGCCTGTCGCAGTGA
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