mRNA_P-wetherbeei_contig15591.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15591.1.1
Unique NamemRNA_P-wetherbeei_contig15591.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: UPI0018CFACCF (exostosin-1-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CFACCF)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-10
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPAL-RAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFEALA 381
            LLN+TF LVP GRR  + R  EA+ AGC+PV+ ++GWV P    I+W  A +++G  +    +P + R+IPA  + A+R        RY       V  TFE +A
Sbjct:   65 LLNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNGWVLPFESKIDWKQA-VIWGDERLLLQIPDMVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFEVIA 168          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: B7Q692_IXOSC (Exostosin-1, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q692_IXOSC)

HSP 1 Score: 62.4 bits (150), Expect = 5.120e-10
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query:   76 NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
            N TF LVP GRR  + R  EA+ AGCVPV+ A+GW  PLAE+++W  A+L        ++   LR++P   V  +R
Sbjct:    3 NATFCLVPRGRRLGSFRFLEALQAGCVPVLLANGWELPLAEVVHWGRAALRGDERLLLQVPDTLRSLPRSRVHQLR 78          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A2K1KVT2_PHYPA (Exostosin domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KVT2_PHYPA)

HSP 1 Score: 65.5 bits (158), Expect = 1.020e-9
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 1
Query:   43 WRSPTDPLELLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFEALAAHIGAAL 402
            W+      +L+NTTFALVP GR+PS+ R  E + AG +PV+ AD +V P   LI W   ++ F + +   ++  LR +        +   +    +YL DD         AL A    AL
Sbjct:  394 WKKHNSYEDLMNTTFALVPAGRQPSSYRFIEVLAAGSIPVLIADNYVKPFDSLIPWYTCAIQFPTTEIKRIVNTLRKVSPEEKLKRQRNCLEIYNQYLKDDETLFQTAIRALKARFMGAL 513          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7L4C2W3_9AVES (EXT1C protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4C2W3_9AVES)

HSP 1 Score: 64.7 bits (156), Expect = 1.990e-9
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   58 DPLELL-NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
            D  ELL N+TF +VP GRR  + R  EA+ A C+PV+ +DGW  P AE+I+W  A++V       ++  A+R IPA  V A +
Sbjct:  314 DYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEVIDWGKAAVVGNERLLLQIPSAVRCIPAQRVLAFQ 396          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A8B7NLE7_HYAAZ (exostosin-1-like n=3 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NLE7_HYAAZ)

HSP 1 Score: 63.9 bits (154), Expect = 3.720e-9
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
            L N TF LVP GRR  + R  E + AGCVPV+ A+GW  P AELI+W AA+L        ++   +R++ A  V  M+
Sbjct:  325 LRNATFCLVPRGRRLGSFRFLEVLSAGCVPVLLANGWELPFAELIDWSAATLQADERLLLQVPELVRSVDAATVLRMK 402          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: UPI0018CFE478 (exostosin-1 n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CFE478)

HSP 1 Score: 63.9 bits (154), Expect = 3.720e-9
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPAL-RAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFE 372
            LLN+TF LVP GRR  + R  EA+ AGC+PV+ ++GWV P    I+W  A +++G  +    +P + R+IPA  + A+R        RY       V  TFE
Sbjct:  331 LLNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNGWVLPFESKIDWKQA-VIWGDERLLLQIPDMVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFE 431          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A3M7QGQ2_BRAPC (Exostosin-1 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7QGQ2_BRAPC)

HSP 1 Score: 63.5 bits (153), Expect = 4.240e-9
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPA-LRAIPAVAVTAMR 303
            L N+TF L+P GRR  T R  E +  GC+ V+  D W+ PL+ELI+W  A +VF   +D   +P+ LR IP   +T MR
Sbjct:  253 LNNSTFCLIPRGRRLGTYRFLEVLKVGCIAVLLTDNWILPLSELIDWKKA-VVFLKEKDLMQVPSILRKIPHEQITQMR 330          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7L0U0M6_CHOAC (EXT1C protein (Fragment) n=1 Tax=Chordeiles acutipennis TaxID=118183 RepID=A0A7L0U0M6_CHOAC)

HSP 1 Score: 63.5 bits (153), Expect = 5.070e-9
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query:   58 DPLELL-NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
            D  ELL N+TF +VP GRR  + R  EA+ A C+PV+ +DGW  P AE+I+W  A++V       ++  A+R IP   V A++
Sbjct:  314 DYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEVIDWGKAAVVGNERLLLQIPSAVRCIPPERVLALQ 396          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A8J2K7Y2_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2K7Y2_9HEXA)

HSP 1 Score: 63.5 bits (153), Expect = 5.200e-9
Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFE 372
            L N+TF LVP GRR  + R  EA+ AGC+PV+ ++GWV P +E+I+W   +L        ++L  +R+I  V + +++  +     +Y++     +  TFE
Sbjct:  321 LQNSTFCLVPRGRRLGSFRFLEALKAGCIPVLLSNGWVLPFSEVIDWTETTLTGDERSLFQVLDMVRSIDDVKIFSLKQQSQILWNQYMSSIEKIIETTFE 421          
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7R8D6K8_LEPSM (EXT1 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8D6K8_LEPSM)

HSP 1 Score: 63.5 bits (153), Expect = 5.260e-9
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1
Query:   70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
            LLN+TF LVP GRR  + R  E + AGCVPVV ++ W+ P +E+I+W  A ++       ++   LR+IP   + +MR
Sbjct:  649 LLNSTFCLVPRGRRLGSFRFLETLQAGCVPVVLSNDWILPFSEIIDWSTAVVMADERLLLQVPEILRSIPQGRIFSMR 726          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0018CFACCF1.440e-1039.05exostosin-1-like n=1 Tax=Teleopsis dalmanni TaxID=... [more]
B7Q692_IXOSC5.120e-1043.42Exostosin-1, putative n=1 Tax=Ixodes scapularis Ta... [more]
A0A2K1KVT2_PHYPA1.020e-932.50Exostosin domain-containing protein n=2 Tax=Physco... [more]
A0A7L4C2W3_9AVES1.990e-943.37EXT1C protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
A0A8B7NLE7_HYAAZ3.720e-943.59exostosin-1-like n=3 Tax=Hyalella azteca TaxID=294... [more]
UPI0018CFE4783.720e-939.22exostosin-1 n=1 Tax=Teleopsis dalmanni TaxID=13964... [more]
A0A3M7QGQ2_BRAPC4.240e-944.30Exostosin-1 n=1 Tax=Brachionus plicatilis TaxID=10... [more]
A0A7L0U0M6_CHOAC5.070e-942.17EXT1C protein (Fragment) n=1 Tax=Chordeiles acutip... [more]
A0A8J2K7Y2_9HEXA5.200e-933.66Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A7R8D6K8_LEPSM5.260e-941.03EXT1 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15591contigP-wetherbeei_contig15591:205..621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2903.EOD38118
Preferred nameEXTL1
PFAMsExostosin,Glyco_transf_64
Model size418
Max annot lvl2759|Eukaryota
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
Exons1
Evalue9.31e-15
EggNOG OGsKOG1021@1|root,KOG1021@2759|Eukaryota
EC2.4.1.224,2.4.1.225
Descriptionmacromolecule glycosylation
Cds size417
COG categoryS
CAZyGT47,GT64
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186061.2684107-CDS-P-wetherbeei_contig15591:204..6211683186061.2684107-CDS-P-wetherbeei_contig15591:204..621Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15591 205..621 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15591.1.1prot_P-wetherbeei_contig15591.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15591 205..621 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15591.1.1

>prot_P-wetherbeei_contig15591.1.1 ID=prot_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
AAAAAAAGVVAAAAWRSPTDPLELLNTTFALVPGGRRPSTRRLGEAMLAG
CVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAM
RGAAVAAARRYLADDGARVAHTFEALAAHIGAALLPVR*
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mRNA from alignment at P-wetherbeei_contig15591:205..621+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15591.1.1 ID=mRNA_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig15591:205..621+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCTGCTGCAGCCGCAGCCGGCGTCGTCGCCGCCGCCGCCTGGCGGAG CCCGACGGACCCGCTGGAGTTGCTCAACACGACGTTCGCGTTGGTGCCAG GCGGGCGGCGGCCATCGACGCGGCGGCTGGGGGAGGCGATGCTGGCCGGC TGCGTGCCAGTTGTCTTCGCCGACGGCTGGGTGCCGCCGCTGGCCGAGCT GATCAACTGGCCGGCAGCGTCACTGGTCTTTGGATCCGCACAGGACACCG AGCTGCTGCCGGCACTGCGGGCGATTCCCGCCGTGGCTGTCACGGCGATG CGCGGGGCGGCGGTGGCGGCGGCGCGGCGGTACCTAGCGGATGACGGCGC GCGGGTGGCGCACACCTTCGAGGCGCTCGCGGCCCATATTGGCGCGGCAT TGCTGCCGGTAAGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15591:205..621+

>mRNA_P-wetherbeei_contig15591.1.1 ID=mRNA_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig15591:205..621+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCTGCTGCAGCCGCAGCCGGCGTCGTCGCCGCCGCCGCCTGGCGGAG
CCCGACGGACCCGCTGGAGTTGCTCAACACGACGTTCGCGTTGGTGCCAG
GCGGGCGGCGGCCATCGACGCGGCGGCTGGGGGAGGCGATGCTGGCCGGC
TGCGTGCCAGTTGTCTTCGCCGACGGCTGGGTGCCGCCGCTGGCCGAGCT
GATCAACTGGCCGGCAGCGTCACTGGTCTTTGGATCCGCACAGGACACCG
AGCTGCTGCCGGCACTGCGGGCGATTCCCGCCGTGGCTGTCACGGCGATG
CGCGGGGCGGCGGTGGCGGCGGCGCGGCGGTACCTAGCGGATGACGGCGC
GCGGGTGGCGCACACCTTCGAGGCGCTCGCGGCCCATATTGGCGCGGCAT
TGCTGCCGGTAAGGTAG
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