mRNA_P-wetherbeei_contig15591.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: UPI0018CFACCF (exostosin-1-like n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CFACCF) HSP 1 Score: 65.5 bits (158), Expect = 1.440e-10 Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPAL-RAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFEALA 381
LLN+TF LVP GRR + R EA+ AGC+PV+ ++GWV P I+W A +++G + +P + R+IPA + A+R RY V TFE +A
Sbjct: 65 LLNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNGWVLPFESKIDWKQA-VIWGDERLLLQIPDMVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFEVIA 168
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: B7Q692_IXOSC (Exostosin-1, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q692_IXOSC) HSP 1 Score: 62.4 bits (150), Expect = 5.120e-10 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 1
Query: 76 NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
N TF LVP GRR + R EA+ AGCVPV+ A+GW PLAE+++W A+L ++ LR++P V +R
Sbjct: 3 NATFCLVPRGRRLGSFRFLEALQAGCVPVLLANGWELPLAEVVHWGRAALRGDERLLLQVPDTLRSLPRSRVHQLR 78
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A2K1KVT2_PHYPA (Exostosin domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KVT2_PHYPA) HSP 1 Score: 65.5 bits (158), Expect = 1.020e-9 Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 1
Query: 43 WRSPTDPLELLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFEALAAHIGAAL 402
W+ +L+NTTFALVP GR+PS+ R E + AG +PV+ AD +V P LI W ++ F + + ++ LR + + + +YL DD AL A AL
Sbjct: 394 WKKHNSYEDLMNTTFALVPAGRQPSSYRFIEVLAAGSIPVLIADNYVKPFDSLIPWYTCAIQFPTTEIKRIVNTLRKVSPEEKLKRQRNCLEIYNQYLKDDETLFQTAIRALKARFMGAL 513
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7L4C2W3_9AVES (EXT1C protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L4C2W3_9AVES) HSP 1 Score: 64.7 bits (156), Expect = 1.990e-9 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 58 DPLELL-NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
D ELL N+TF +VP GRR + R EA+ A C+PV+ +DGW P AE+I+W A++V ++ A+R IPA V A +
Sbjct: 314 DYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEVIDWGKAAVVGNERLLLQIPSAVRCIPAQRVLAFQ 396
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A8B7NLE7_HYAAZ (exostosin-1-like n=3 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NLE7_HYAAZ) HSP 1 Score: 63.9 bits (154), Expect = 3.720e-9 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
L N TF LVP GRR + R E + AGCVPV+ A+GW P AELI+W AA+L ++ +R++ A V M+
Sbjct: 325 LRNATFCLVPRGRRLGSFRFLEVLSAGCVPVLLANGWELPFAELIDWSAATLQADERLLLQVPELVRSVDAATVLRMK 402
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: UPI0018CFE478 (exostosin-1 n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CFE478) HSP 1 Score: 63.9 bits (154), Expect = 3.720e-9 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPAL-RAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFE 372
LLN+TF LVP GRR + R EA+ AGC+PV+ ++GWV P I+W A +++G + +P + R+IPA + A+R RY V TFE
Sbjct: 331 LLNSTFCLVPRGRRLGSFRFLEALQAGCIPVLLSNGWVLPFESKIDWKQA-VIWGDERLLLQIPDMVRSIPAERIFALRQQTQVLWERYFGSIEKIVFTTFE 431
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A3M7QGQ2_BRAPC (Exostosin-1 n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7QGQ2_BRAPC) HSP 1 Score: 63.5 bits (153), Expect = 4.240e-9 Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPA-LRAIPAVAVTAMR 303
L N+TF L+P GRR T R E + GC+ V+ D W+ PL+ELI+W A +VF +D +P+ LR IP +T MR
Sbjct: 253 LNNSTFCLIPRGRRLGTYRFLEVLKVGCIAVLLTDNWILPLSELIDWKKA-VVFLKEKDLMQVPSILRKIPHEQITQMR 330
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7L0U0M6_CHOAC (EXT1C protein (Fragment) n=1 Tax=Chordeiles acutipennis TaxID=118183 RepID=A0A7L0U0M6_CHOAC) HSP 1 Score: 63.5 bits (153), Expect = 5.070e-9 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 58 DPLELL-NTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
D ELL N+TF +VP GRR + R EA+ A C+PV+ +DGW P AE+I+W A++V ++ A+R IP V A++
Sbjct: 314 DYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEVIDWGKAAVVGNERLLLQIPSAVRCIPPERVLALQ 396
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A8J2K7Y2_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2K7Y2_9HEXA) HSP 1 Score: 63.5 bits (153), Expect = 5.200e-9 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMRGAAVAAARRYLADDGARVAHTFE 372
L N+TF LVP GRR + R EA+ AGC+PV+ ++GWV P +E+I+W +L ++L +R+I V + +++ + +Y++ + TFE
Sbjct: 321 LQNSTFCLVPRGRRLGSFRFLEALKAGCIPVLLSNGWVLPFSEVIDWTETTLTGDERSLFQVLDMVRSIDDVKIFSLKQQSQILWNQYMSSIEKIIETTFE 421
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Match: A0A7R8D6K8_LEPSM (EXT1 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8D6K8_LEPSM) HSP 1 Score: 63.5 bits (153), Expect = 5.260e-9 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 70 LLNTTFALVPGGRRPSTRRLGEAMLAGCVPVVFADGWVPPLAELINWPAASLVFGSAQDTELLPALRAIPAVAVTAMR 303
LLN+TF LVP GRR + R E + AGCVPVV ++ W+ P +E+I+W A ++ ++ LR+IP + +MR
Sbjct: 649 LLNSTFCLVPRGRRLGSFRFLETLQAGCVPVVLSNDWILPFSEIIDWSTAVVMADERLLLQVPEILRSIPQGRIFSMR 726 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15591.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15591.1.1 >prot_P-wetherbeei_contig15591.1.1 ID=prot_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp AAAAAAAGVVAAAAWRSPTDPLELLNTTFALVPGGRRPSTRRLGEAMLAGback to top mRNA from alignment at P-wetherbeei_contig15591:205..621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15591.1.1 ID=mRNA_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig15591:205..621+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15591:205..621+ >mRNA_P-wetherbeei_contig15591.1.1 ID=mRNA_P-wetherbeei_contig15591.1.1|Name=mRNA_P-wetherbeei_contig15591.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig15591:205..621+ (Phaeothamnion wetherbeei SAG_119_79)back to top |