mRNA_P-wetherbeei_contig1559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1559.1.1
Unique NamemRNA_P-wetherbeei_contig1559.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: D7FRX8_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX8_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 7.390e-45
Identity = 102/308 (33.12%), Postives = 156/308 (50.65%), Query Frame = 1
Query:  475 IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTADPNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFA---PAGNQV-LVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAM-PSQTDYGQRVG---DVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNT--DYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEGRADKAGPTKDDFAWLKNTCNVTA-GEECGICDSVWPC-ADGVNSAN-CTTSFRAPAFQY 1359
            IKD V    DHG     +HP FPA P +F+FY+  P   W   C       G  +C     L R    VT   DG C++++      N+V L+EDWCS++ +H N  +E++   ++++ +GD +  P    Y    G   D+CY   +K PQG F+ Q   FLQG L+   A + + + + +  T  DY++ AKGLR P+   ++  TGD+ +GDVG    EEIN +        S  P N GWPC+EG     G     + W+  +C+V      C IC +++ C A+ +   + C  ++  P+FQY
Sbjct:   29 IKDDVNAWGDHGLLSSQLHPDFPAEPYLFLFYSVAPEG-WAGECERI--VKGLPFCEQNAVLERLKIDVTVDDDGMCSDWSFSDSENNRVRLMEDWCSSAGAHHNAAMEFYTDGSLLVANGDSSQAPFDRGYPAEDGTPVDLCYLDDEKQPQGYFKAQNEAFLQGHLIRIHAEATMYDSEDLPLTELDYDVWAKGLRNPFRLDIDRQTGDIYLGDVGDSTAEEINILRNPLDAAASSLPANLGWPCVEG----GGIPLPTYNWITQSCDVNDDNNNCDICKAIFACTAEALGDVDLCDPAYVPPSFQY 329          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.570e-41
Identity = 115/319 (36.05%), Postives = 151/319 (47.34%), Query Frame = 1
Query:  475 IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-PNNQWQDSC---------TLPPDADGFSYCNTTQRLHRF----DFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTK---AEMNTPSLWPLNFGWPCLEGRADKAGPTKDDF-AWLKNTCNVTAGEECGICDSVWPCADGVNSANCTTSFRAPAFQYR-GPID 1374
            IKD VY   DHG      HP FP  P ++I Y+++ P N WQD C         T PPD     YC T  +L R     D T  K             +Q L +DWCS++ +H  G I W +  +MI  +GDG+     D+GQ   D C DP     QG F  Q+  +L+GK L     ++LKNG L    DY+ ++KG R P+   V+P TGD+ IGDVGS +WEEIN +     A+   P     NFGWPC+EG         D +  WL+      A      C  V+   DG        +F  P F YR G +D
Sbjct:   81 IKDQVYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPKKVAMTNPPDTR--PYCKTMAKLVRLKVDPDLTSAKF------------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQ-DECTDPKGPKDQGVFTAQKDAYLRGKFLHISPAAVLKNGYLQGGQDYSQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNPLSADYRKP-----NFGWPCVEG----VDAVSDIYQTWLR------AEGLLATCQDVY---DG--------NFTKPVFSYRYGAVD 358          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A4D9D361_9STRA (GSDH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D361_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.230e-39
Identity = 101/307 (32.90%), Postives = 158/307 (51.47%), Query Frame = 1
Query:  304 TILNDVFTADTISLIPTGTRRMETRFSPCSDHLF--IIDKSGNFIAQSTVVDESTFKFTIKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-PNNQWQDSCT-------LPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSL-WPLNFGWPCLEG 1191
            T+ ++++    +  +P G  ++ T   P   H++  I  KS ++   +T++D       I + VY   DHG     +HP FP  P +FI Y+A+ P   W D+C        +   AD   YC T  ++ R    +T   D     F    +  L  DWC+++ +H  G + + +  +MI  +GDG+     D+GQ   D C DP     QG F  Q+  +L+GK ++ K  SLLK+  L  N DY ++++G R P+ + ++P TGDV  GDVGS +WEEIN +     N   L + +NFGWPC+EG
Sbjct:   44 TVWDNIWGVVQVVFLPGG--KVMTVHKPGELHVYDSIFSKSQDY---TTILD-------INEEVYSWWDHGLLSAAVHPDFPQKPYLFIAYSAEYPGKPWNDNCEVDYRLSHMTTPADTRPYCKTMAKIIR----LTVDEDFTTATF----DAELFHDWCTSTYTHHVGTMNFLEDGSMIYGAGDGSHFQGIDHGQPQ-DECTDPQGPKDQGVFLSQKDGYLRGKFIVIKPESLLKDEHLQANVDYTVISRGARNPFRSTIDPMTGDVFFGDVGSSVWEEINHIP----NPLDLDYVMNFGWPCIEG 325          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS)

HSP 1 Score: 158 bits (400), Expect = 4.240e-38
Identity = 105/277 (37.91%), Postives = 137/277 (49.46%), Query Frame = 1
Query:  400 LFIIDKSGNF-IAQSTVVDESTFKFTIKDVVYETA----DHGPTGMLIHPSFPATPSIFIFYTAD-------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLIL-NTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
            +F+ +K G   +  S   DE+ F +   D  YE      D G  G+ +  ++P  P +++FY+ +       P+    D  T P  AD  SYC T   L R    V +              QVLV DWCS S SH  G++ W     + LT+GDGA     D G    D CY+      QG FR Q  E+LQGKLL F   SL+ +  L L N D+ I+AKGLR PY   V+P+TGD+ +GDVGS  WEEIN V        +    NFGWPC EG
Sbjct:   59 VFLTEKDGRIRLYPSIEADENDFVYVF-DQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEG 323          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A3P3Y1N1_PLABS (PKD domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1N1_PLABS)

HSP 1 Score: 158 bits (400), Expect = 4.660e-38
Identity = 105/277 (37.91%), Postives = 137/277 (49.46%), Query Frame = 1
Query:  400 LFIIDKSGNF-IAQSTVVDESTFKFTIKDVVYETA----DHGPTGMLIHPSFPATPSIFIFYTAD-------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLIL-NTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
            +F+ +K G   +  S   DE+ F +   D  YE      D G  G+ +  ++P  P +++FY+ +       P+    D  T P  AD  SYC T   L R    V +              QVLV DWCS S SH  G++ W     + LT+GDGA     D G    D CY+      QG FR Q  E+LQGKLL F   SL+ +  L L N D+ I+AKGLR PY   V+P+TGD+ +GDVGS  WEEIN V        +    NFGWPC EG
Sbjct:   59 VFLTEKDGRIRLYPSIEADENDFVYVF-DQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEG 323          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A7W7WR06_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Micromonospora polyrhachis TaxID=1282883 RepID=A0A7W7WR06_9ACTN)

HSP 1 Score: 111 bits (277), Expect = 2.450e-22
Identity = 94/314 (29.94%), Postives = 135/314 (42.99%), Query Frame = 1
Query:  358 TRRMETRFSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDV--CYDPTKKLPQGRFRPQRSEF----------------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPL-NFGWPCLEGRADKAG 1209
            TR  +  FSP    +F+  K+G       + D +   F  ++  VY+  D G  G+ + P FPA P +++ Y+ D         + D+C           C  + R+ R         DG   N      QVL+ DWC    SH  G++ +     + +T GDGA  + TDYGQ       C DP   +  G   P  +E                 L G L+    T+   L +     + D N   IVA GLR PY  A  P T +V +GDVG ++WEEIN +T      P+  P+ N+GWPC EG   + G
Sbjct:   40 TRPTKLVFSP-DGRIFVGQKNGIIKVFDGLSDTTATVFADLRSNVYDFEDLGLIGLALAPDFPADPWVYVSYSYDGMIGGSAPTYNDACAA------IGSCPASSRVSRL------RADG---NVMTGTEQVLLHDWCQQIESHSIGDLAFGPDGALYVTGGDGASGTFTDYGQAGNPTNPCGDPPAPIG-GAMTPPTAEGGALRSQDVRTPADPTGLSGTLIRINPTTGAALPDNPWASSADANTRRIVAYGLRNPYRWAFRPGTSEVWLGDVGWRVWEEINRITD-----PAGGPVRNYGWPCYEGNVRQNG 331          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A0H5CPG9_9PSEU (Cytochrome c551/c552 n=1 Tax=Alloactinosynnema sp. L-07 TaxID=1653480 RepID=A0A0H5CPG9_9PSEU)

HSP 1 Score: 106 bits (265), Expect = 9.350e-21
Identity = 91/315 (28.89%), Postives = 134/315 (42.54%), Query Frame = 1
Query:  367 METRFSPCSDHLFIIDKSGNFIAQSTVVDES-TFKFTIKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDV--CYDP------TKKLPQ---GRFRPQRSEFLQGKLLL----FKATSLLKNGK----LILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEGRADKAG 1209
            M   FSP    +F+ +KSG       + D + T    ++  V+  AD G   +++ P+FP  PS+++ Y  D           P +   D+C  PP A G   C  + RL + +      T G          QVL+EDWC    SH  G++ +     +  + GDGA     DYGQ    +  C DP       + +P    G  R Q  + +   L L     +   +   G     +  + D N   I+A GLR P+  A+ P T ++ +GDVG   WEEIN +T            NFGWPC EG +   G
Sbjct:    1 MAVEFSP-DGRVFVAEKSGLVKVFDGLADTTPTIYADLRAKVHNFADRGLMSLVLAPTFPTDPSVYVLYAHDAAIGGTAPRWGPGDGTNDNCPSPPGATGDG-CVISGRLSKLN------TSG--------AEQVLIEDWCQQYPSHSVGDLAFGPDGFLYASGGDGASYVFADYGQDGNPLNPCGDPPGGVGGVQTVPTAEGGALRSQDVQTMTDPLTLDGTVIRIDPVTGQGAPGNPMAGSADANARRIIAAGLRNPFRFALRPGTSELWLGDVGWGTWEEINRITSPTDGAVD----NFGWPCKEGTSPNDG 295          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: UPI001A615B4B (PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa iriomotensis TaxID=234613 RepID=UPI001A615B4B)

HSP 1 Score: 102 bits (254), Expect = 2.210e-19
Identity = 88/299 (29.43%), Postives = 128/299 (42.81%), Query Frame = 1
Query:  379 FSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTADPN-----NQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQR--VGDVCYDP------TKKLPQGRFRPQRSEF---------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
            F+P    + I  K+G       + D +   F  +   V+   D G  G+ + P FPATP +++ YT D         + D C +  D      C  + R+ R        T            QVL+ DWC    +H  G+I +     + ++ GDGA P+  DYGQR  V + C DP      T   P       RS+          L G  +     +   L +  +  ++D N   I+A GLR PY  A  P T +V  GDVG ++WEEI+ +    +N+P     NFGWPC EG
Sbjct:   57 FAP-DGRILIAQKNGVIKIYDNLSDTTPTVFADLSQQVFTYGDLGLLGLAVPPDFPATPWVYVSYTYDGQIGGSAPTYNDRCAVLGD------CIVSNRVSRLRIAGDVMTGSE---------QVLLHDWCHLYETHAVGDIGFGPDGALYVSGGDGASPAFPDYGQRGTVTNACGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPNTGAALPDNPMAGSSDPNTRRILAYGLRNPYRWAFRPGTSEVWFGDVGWRLWEEIDRLPDP-LNSPVE---NFGWPCYEG 335          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A7X0VBM4_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardioides luti TaxID=2761101 RepID=A0A7X0VBM4_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 7.260e-19
Identity = 90/303 (29.70%), Postives = 132/303 (43.56%), Query Frame = 1
Query:  379 FSPCSDHLFIIDKSGNFIAQSTVVDESTFKFTIKDVVYETA-DHGPTGMLIHPSFPATPSIFIFYT-----ADPN--------NQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEF----LQGKLLLFKATSLL--KNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWP---LNFGWPCLEGRADKAG 1209
            F+P    +F+ +K+G       + D     F   +V  E   D G  G+ + P FPA P +++ Y       DP          Q+ D C  PP AD    C  + R+ R       + DG   N      QVLVED+C    SH  G + +     +  ++G+GA  +  DYGQ  G+ C DP  +    R +  R+      L G ++     + L      L  + D N   I+A G R P+  A  P T  V++GDVGS  +EE+NT+       P+  P   ++FGWPC EG     G
Sbjct:   56 FAP-DGRVFVAEKTGVIKVFDGLDDTDADVFADLNVNVENFYDRGLLGLTLDPEFPARPYVYVSYAYNHVLGDPAPAPRWGEPGQYYDDCPDPPGADDQG-CVVSGRVSRL------TADG---NQVTGEEQVLVEDYCLQFPSHATGTVAFGPDGALYASAGEGANYNYEDYGQ-TGNPCGDPVDEGGALRAQDLRTGGDPVGLNGTVIRIDPDTGLGAPGNPLASSPDLNARRIIADGFRNPFRFAFRPGTSQVVVGDVGSFQYEELNTL-------PTTTPDQVVDFGWPCYEGAGRNPG 339          
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A1H3RCP1_9ACTN (Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3RCP1_9ACTN)

HSP 1 Score: 99.4 bits (246), Expect = 2.230e-18
Identity = 98/358 (27.37%), Postives = 144/358 (40.22%), Query Frame = 1
Query:  208 SVGMRAFSRSSLGLALAGSILQQQHVAHAAEPTILNDVFTADTISLIPTG-TRRMETRFSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQR--VGDVCYDP------TKKLPQGRFRPQRSEF---------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPL-NFGWPCLEG 1191
            S+ +R F    L L L   +     V   A P          T  ++ TG +   +  F+P    + I  K+G      ++ D +   F  +   V+   D G   M + P FP +P +++ YT D         + D C +  D      C  + R+ R              N      QVL+ DWC    +H  GN+ +     + ++ GDGA PS  DYGQR  V + C DP      T   P       RS+          L G  +     +   L +  +  ++D N   I+A GLR PY     P T +V  GDVG ++WEEI+      +  P   P+ NFGWPC EG
Sbjct:    2 SLSVRRFLAGLLTLVLGAPLT----VGALAAPAAAGPPPAGFTEQVVMTGLSSPTKLVFAP-DGRILIAQKNGVIKIYDSLSDTTPTVFADLSSEVFTYGDLGLLSMAVPPDFPDSPYVYVSYTYDGPIGGSAPTYNDQCAVLGD------CVVSNRVSRLRIAG---------NVMTGSEQVLLHDWCHVYETHAVGNVGFGPDGALYVSGGDGASPSFPDYGQRGAVTNPCGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPATGAALPDNPMAGSSDPNTRRILAYGLRNPYRWVFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNGPVENFGWPCYEG 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX8_ECTSI7.390e-4533.12GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A4D9D6I0_9STRA3.570e-4136.05GSDH domain-containing protein n=2 Tax=Monodopsida... [more]
A0A4D9D361_9STRA1.230e-3932.90GSDH domain-containing protein n=1 Tax=Nannochloro... [more]
A0A0G4IYG1_PLABS4.240e-3837.91PKD domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A3P3Y1N1_PLABS4.660e-3837.91PKD domain-containing protein n=1 Tax=Plasmodiopho... [more]
A0A7W7WR06_9ACTN2.450e-2229.94Glucose/arabinose dehydrogenase n=1 Tax=Micromonos... [more]
A0A0H5CPG9_9PSEU9.350e-2128.89Cytochrome c551/c552 n=1 Tax=Alloactinosynnema sp.... [more]
UPI001A615B4B2.210e-1929.43PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa i... [more]
A0A7X0VBM4_9ACTN7.260e-1929.70PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardio... [more]
A0A1H3RCP1_9ACTN2.230e-1827.37Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1559contigP-wetherbeei_contig1559:262..5027 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog58123.JOFJ01000005_gene1413
PFAMsBig_5,CBM_6,CarboxypepD_reg,DUF1080,DUF1349,F5_F8_type_C,GSDH,PA14,PKD,Ricin_B_lectin,ThuA
Model size1375
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal peptide
Exons11
Evalue2.28e-30
EggNOG OGsCOG2133@1|root,COG3291@1|root,COG3828@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG3828@2|Bacteria,2GJFY@201174|Actinobacteria,4EKGY@85012|Streptosporangiales
DescriptionRepeats in polycystic kidney disease 1 (PKD1) and other proteins
Cds size1158
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1559.1.1prot_P-wetherbeei_contig1559.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1559 262..4811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186061.1082625-CDS-P-wetherbeei_contig1559:261..3011683186061.1082625-CDS-P-wetherbeei_contig1559:261..301Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 262..301 -
1683186061.1193738-CDS-P-wetherbeei_contig1559:436..4781683186061.1193738-CDS-P-wetherbeei_contig1559:436..478Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 437..478 -
1683186061.1288948-CDS-P-wetherbeei_contig1559:809..8741683186061.1288948-CDS-P-wetherbeei_contig1559:809..874Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 810..874 -
1683186061.1409168-CDS-P-wetherbeei_contig1559:1172..12781683186061.1409168-CDS-P-wetherbeei_contig1559:1172..1278Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 1173..1278 -
1683186061.1573944-CDS-P-wetherbeei_contig1559:1714..18781683186061.1573944-CDS-P-wetherbeei_contig1559:1714..1878Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 1715..1878 -
1683186061.1695366-CDS-P-wetherbeei_contig1559:2340..24601683186061.1695366-CDS-P-wetherbeei_contig1559:2340..2460Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 2341..2460 -
1683186061.1798737-CDS-P-wetherbeei_contig1559:2723..27881683186061.1798737-CDS-P-wetherbeei_contig1559:2723..2788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 2724..2788 -
1683186061.1895428-CDS-P-wetherbeei_contig1559:3139..33241683186061.1895428-CDS-P-wetherbeei_contig1559:3139..3324Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 3140..3324 -
1683186061.1997337-CDS-P-wetherbeei_contig1559:3626..37051683186061.1997337-CDS-P-wetherbeei_contig1559:3626..3705Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 3627..3705 -
1683186061.2102184-CDS-P-wetherbeei_contig1559:4131..41951683186061.2102184-CDS-P-wetherbeei_contig1559:4131..4195Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 4132..4195 -
1683186061.220685-CDS-P-wetherbeei_contig1559:4583..48111683186061.220685-CDS-P-wetherbeei_contig1559:4583..4811Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1559 4584..4811 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186061.23146-UTR-P-wetherbeei_contig1559:4811..50271683186061.23146-UTR-P-wetherbeei_contig1559:4811..5027Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1559 4812..5027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1559.1.1

>prot_P-wetherbeei_contig1559.1.1 ID=prot_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=386bp
MRAFSRSSLGLALAGSILQQQHVAHAAEPTILNDVFTADTISLIPTGTRR
METRFSPCSDHLFIIDKSGNFIAQSTVVDESTFKFTIKDVVYETADHGPT
GMLIHPSFPATPSIFIFYTADPNNQWQDSCTLPPDADGFSYCNTTQRLHR
FDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMIL
TSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKA
TSLLKNGKLILNTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEI
NTVTKAEMNTPSLWPLNFGWPCLEGRADKAGPTKDDFAWLKNTCNVTAGE
ECGICDSVWPCADGVNSANCTTSFRAPAFQYRGPID
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mRNA from alignment at P-wetherbeei_contig1559:262..5027-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1559.1.1 ID=mRNA_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4766bp|location=Sequence derived from alignment at P-wetherbeei_contig1559:262..5027- (Phaeothamnion wetherbeei SAG_119_79)
GAACCTAAAATGGACAGACATGTTCCCCCAGTATATCTCCGACGGGCATC TTTCCAGGTCGGCAAACACCTGTCCCGTGCAAAGCCACTCCCGCTCCCTC GCTCAGCAAAGCCAATCCCTTCCTTGTCGAGAAGCGCGAAGGAAGAAGGG AGCTCGTGGGGCTAGTATAAACCTTGCGACGTCTCGGATTACAATTGTTG GGCGAGAAGTGTTGGGATGCGAGCCTTCTCTCGAAGCAGCCTGGGACTTG CTCTTGCAGGATCTATTTTGCAGCAGCAGCATGTCGCCCACGCGGCGGAG CCGACCATCCTGAATGATGTCTTCACGGCGGACACCATCTCGCTTATCCC GACGGGCACTCGCCGCATGGAAACGAGGTTCTCCCCTTGCTCGGACCATC TTTTCATAATCGATAAGAGCGGAAATTTCATCGCCCAATCCACCGTGAGT CGCTCTTTCCGGGTAGCGGATCGTCCGGTTGCACCTGACAGTTCGCCGGC GCTTCTTTTCTTGCTTCTTCCGGGTCTTTCTTTCCTGCTGCCGCCGCCGC CGCGGTTTATGTACCGTCTTCGGCAAGGCCCGCTTGCACTTCTTTCTGCT TTTTTCTTTCGTCGCTGCAATATACGCCATAACAGGCGTAGAAAACTGGT GGGTATGCAGAAATTGCCTTCGCTGATGGACTGACCGGATGGACAGACGG GTGGCAGATAGATGGACAGACGGACGGCAGATGGACGGAGCAGTTCTGTC GACGCTTCTCCCCGCCCGTGCAAGACAACGAAGCTTACTTCTCTTAGCTG CCTGATTCTTTCTCTTCTCTTTTTGTGTGCAGGTGGTCGACGAATCGACC TTCAAATTCACCATCAAGGATGTCGTGTACGAAACCGCGGACCATGGTAC GTTTTGACCGGGCTGTGCCGCCACTGCAGTCGGCCACCTCCCCTGATTCC GAGCTGTTCCTGCTACCGCCAATGCTGCTGCCGCTTGCTCCGCTTTCGCG CCGCTGTCTCGCTCCTCTACCTCTGGCGTTGGCATCGCTGCCGCCGCCGC GGCAGCTGACATCGTCGTCGCCGCTGTCGCTCCCATTGCCGCCATCGCAA TCGCCATTGTTGCCGCTGTTTCATCGACGCCATCACTTCCTACTGCTTCC TCTGCCTGCCCGCCGCGTCTTGCTGCTTCTGCTGCCGGAAAAATGGTCAC TGCCATTGCCGCCGCTGCCTTTGCTCCTGCTGTTGCCGTCACCGCCGCCG CTGCCGGTGTGGGCACCGGTGACGCTGCCGTAAACGCTGTGACTGTCGCA ACCGCGCCGTAACCGCTATCAGGCCCGACAGGCATGCTAATCCATCCGAG CTTCCCGGCGACGCCGTCCATTTTCATATTTTACACAGCTGACCCCAACA AGTGAGTGAGGGGGGAACCGCTTAATACACCATGTTCATAAGGCCTTTGG CGTGACGGGTCATCACGGTTAAAAAGACAGTTCATACTGGTGGAACGGGG CAAGCTCCGTACCTCCTCCCTGGGGTAGCCATTAAACCGTCGCAGCCAGA TTCGGAAGCTTGACAAACCTACTTAACTGCCGAAACCGCCCCGAACTGCC TGAAAATCGGCATTAAAGCTCCGTCATCTTGCGTGCGGCTCGCACTCTGT TCGCCCACCCGCCTGCCCACCACCGAAACCGCCCCATACCGTGGGCGTCG CAGCCAGTGGCAAGACTCGTGCACGCTGCCGCCGGATGCTGATGGCTTTT CTTATTGTAACACCACGCAGCGTCTGCACCGCTTCGACTTCACCGTTACA AAGTCGACTGACGGCCGCTGCACCAACTTCGCGCCCGCGGGGAATCAGGT CTTGGTGGAGGACTGGTGCTCGACGTCGTCGTCTCACGGTGAGCCCCTCT AGCCTGTGATCACGGTGGCGAAAATGGTTACGGAGGTTGCGACGGGTCCG GCGGTTGTCCCCATGTTACGGCTGCCGATGGCGCCACTGCTGCACTGCCT CCGCTTCGGCTGGCGCTGATGTCTTGCTCGTTGCCCTGCCACCGTTGCCT CTGCCGTCTCCGTCGCCGTCACCGCCATCACTGCTTTCACCACCATTGCC GCCATCGCCGCCGTCGTCGCCGTCGTCGCTGCCATAAGCACCGTCGCCGC CGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGTAACCGCCGCTGCCCCCG CCGCCGTCCGTGCCCGCCCCCAAAAATGAGCCAACTCAGGCAACGGCAAC ATTGAGTGGTGGGATGGCGCCAACATGATCCTAACGTCCGGCGACGGCGC CATGGTGAGCGAGCTGTCAACAGATGCGAAATTCTTCTTCCTCTGCCCGT CATCGCCCAGCTGGACATCAGGGGTTCGGTATCCTGAGTTACGAATTTCT GGCCTCTTGTGCCCCTCCACTGCCTGCGCAAAGAGGACACAATCAAAGGC AAGGAGTTTGAGACCTTGCCGACTCATACTATCTCCCTCGACCTCCCCCA ACCTGCGCCCGCTCTATCCGCGCGGCGGCCGTGTTTGCTCCGGAGTCGGA TCTGCAACGATTTTCAGCCGTCCCAAACGGACTACGGACAGCGCGTCGGC GACGTATGCTACGACCCTACCAAGAAGCTGCCGCAGGGACGCTTCCGGCC GCAGCGGAGCGAATTTCTCCAGGGCAAACTCCTCCTGGTAAGTCGAAGCT CGCTTCTGCTGTGGCCTGCCTTTTTGAGATGAAGCGTTGCGATGCCAGCG GCGGCGAGTGCGGCGGCTGCGGCGTCGGTGGCTGCGGCGGCGGCGGCTGC GGTGGCTGTGGCGCGCGGCGGCTGGGATGTAAGCGGGATGGCTGGGATAG CGGCCCCATTGATTTTTCTGGTTTGCACGCTGGACACCCTTGGTTCTGAG ACATGAGGACATTTAACACTGATTCCGTCACCCTTGGGTGCATACTTGCG CGTTGTGCGTTCTAACGCATCACCACTTTTCCTTATGCCGCTGCGCCTAT TGTCGATGCTCGTCCCCTGCCGCCGCTGCCGCCGCCGGCGCCACCACCAC CACTGCCGCCGTTCCCCCTACCGTGCCAACGCGGCCCAATTCTTCATCAT CGCCGTGAACAACGCTCCGGAATCGGAATCGGAAACCGGAAATTCCCAGT TCAAGGCGACATCGCTGCTAAAAAATGGCAAGCTCATCCTAAATACCGAT TATAACATCGTCGCGAAAGGCCTCCGGCAGCCGTACGTCAACGCAGTGAA CCCGTGGACGGGCGATGTACTCATCGGCGACGTCGGCAGCAAGATCTGGG AGGAAATCAACACGTGAGCAGATTGTGGATACGAAAAGGTAGTTTCCTCC GCAACCCGAGGATTTCCCGAGGTGTTTCTGCCAAGAGCTTCCTCCCCTTG TTTCTTCGGTTGGCCGCTTGCTCTACGCGCTGTTGGTTCCCGCGAAAATG CCAGGGAAGCGCGCCAGTTTGGGTTGAGCAAGCCATATATCGTAGCGTCT ATTCTTCTGTCGGCGCGGCGCCGCTTACCGGATTATGCTCCCGCCTTTTT TTTGGTGGGGTCAAGAATCTTCCGTCATTCTCTGCATCGACCTGTTCCGG TCTCGGCTCCTCTTCCATCATCCTTCCCTTCCCTCTTTTCGATCTCTTTG CTCGCCGGCCCCTGCTGGCCGATGGGCTGCATGCCACACTGCTTTGTCCC CCACAACGTTATTGCCGTTTCAATTCTGTGTCGATTTCGGTTTCGGTAGC GTGACCAAGGCGGAGATGAACACGCCCAGCTTGTGGCCCCTCAACTTCGG CTGGCCGTGCCTCGAGGGACGGGCGGACAAAGCCGGACCCACGAAGGACG ACTTTGTAAGTTGGTGGGTGGGGTCTGTCCTTTGGCCGAGTGGCGGTGTC TTCCAACGCAACCTATACGCTTTCCATGACTCCAGACGGTCGGCGGCGTT TCCCGTGCCGCCCACCTTTCACAGCTGCACTTGTGTCACCACCTCAACCG CTGCCATCGCTGCCGCCGCCGCCACCGTGGTCGTCGCCGTTGCTGCCACT ACCTTGGCCACCGCCTGCTGCTGCGGTCAACGATCTATGCACGGCCGCTG TCCGTGTCCACCACGGGTTCCGTCGCCGCCGCCGGACTCCATCGCTGCCG CAGGCCTGGCTCAAGAACACATGCAACGTGACCGCCGGCGAGGAATGCGG CATCTGCGACTCGGTCTGGTAAGCAGCCGTATTACAATCGGGTCCACAAG AGGTTTCTAGCTGGTATCATGGAAGCTTCAAAACGCCGAAATCCAGACCT GCCAACCAATGTGGAAGTCTGCCCCAAACCCCAAGACTCTAATCGGGGCA GCAGGCCGAGAGCATAGCGCGTTCGATCCTTGCTGATTTCCTATCGTGCG GTCTATTTGTCGTCCCATCTAGATCGTTCGAACTGAACAGGTACTCTATT TCTGCCGCCCAATGTATCGTTCCTGTTCCACGCTGTTCTGAATTTGGCTG GAATTCTCTTCTTTCCGCTCTTGTGCGCGCTGGCGTTCGTCTCTTCCAGG CCCTGCGCGGACGGCGTCAATAGCGCAAACTGCACCACGAGGTGAGATAG GGGAGAATGATTTGGACAACAAATATATAAACGCGATCCTATTCCTCCTT CTCTTTGCATACAGAAAGAGCAGAAATGACCGGTTGCGAGTTTTTCCTCC CCCTTTCTGTTTTTGAAAATGCCCAGCTTCCGCGCGCCGGCATTCCAGTA CCGCGGCCCGATCGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1559:262..5027-

>mRNA_P-wetherbeei_contig1559.1.1 ID=mRNA_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1158bp|location=Sequence derived from alignment at P-wetherbeei_contig1559:262..5027- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAGCCTTCTCTCGAAGCAGCCTGGGACTTGCTCTTGCAGGATCTAT
TTTGCAGCAGCAGCATGTCGCCCACGCGGCGGAGCCGACCATCCTGAATG
ATGTCTTCACGGCGGACACCATCTCGCTTATCCCGACGGGCACTCGCCGC
ATGGAAACGAGGTTCTCCCCTTGCTCGGACCATCTTTTCATAATCGATAA
GAGCGGAAATTTCATCGCCCAATCCACCGTGGTCGACGAATCGACCTTCA
AATTCACCATCAAGGATGTCGTGTACGAAACCGCGGACCATGGCCCGACA
GGCATGCTAATCCATCCGAGCTTCCCGGCGACGCCGTCCATTTTCATATT
TTACACAGCTGACCCCAACAACCAGTGGCAAGACTCGTGCACGCTGCCGC
CGGATGCTGATGGCTTTTCTTATTGTAACACCACGCAGCGTCTGCACCGC
TTCGACTTCACCGTTACAAAGTCGACTGACGGCCGCTGCACCAACTTCGC
GCCCGCGGGGAATCAGGTCTTGGTGGAGGACTGGTGCTCGACGTCGTCGT
CTCACGGCAACGGCAACATTGAGTGGTGGGATGGCGCCAACATGATCCTA
ACGTCCGGCGACGGCGCCATGCCGTCCCAAACGGACTACGGACAGCGCGT
CGGCGACGTATGCTACGACCCTACCAAGAAGCTGCCGCAGGGACGCTTCC
GGCCGCAGCGGAGCGAATTTCTCCAGGGCAAACTCCTCCTGTTCAAGGCG
ACATCGCTGCTAAAAAATGGCAAGCTCATCCTAAATACCGATTATAACAT
CGTCGCGAAAGGCCTCCGGCAGCCGTACGTCAACGCAGTGAACCCGTGGA
CGGGCGATGTACTCATCGGCGACGTCGGCAGCAAGATCTGGGAGGAAATC
AACACCGTGACCAAGGCGGAGATGAACACGCCCAGCTTGTGGCCCCTCAA
CTTCGGCTGGCCGTGCCTCGAGGGACGGGCGGACAAAGCCGGACCCACGA
AGGACGACTTTGCCTGGCTCAAGAACACATGCAACGTGACCGCCGGCGAG
GAATGCGGCATCTGCGACTCGGTCTGGCCCTGCGCGGACGGCGTCAATAG
CGCAAACTGCACCACGAGCTTCCGCGCGCCGGCATTCCAGTACCGCGGCC
CGATCGAC
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