mRNA_P-wetherbeei_contig1559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: D7FRX8_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX8_ECTSI) HSP 1 Score: 169 bits (428), Expect = 7.390e-45 Identity = 102/308 (33.12%), Postives = 156/308 (50.65%), Query Frame = 1
Query: 475 IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTADPNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFA---PAGNQV-LVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAM-PSQTDYGQRVG---DVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNT--DYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEGRADKAGPTKDDFAWLKNTCNVTA-GEECGICDSVWPC-ADGVNSAN-CTTSFRAPAFQY 1359
IKD V DHG +HP FPA P +F+FY+ P W C G +C L R VT DG C++++ N+V L+EDWCS++ +H N +E++ ++++ +GD + P Y G D+CY +K PQG F+ Q FLQG L+ A + + + + + T DY++ AKGLR P+ ++ TGD+ +GDVG EEIN + S P N GWPC+EG G + W+ +C+V C IC +++ C A+ + + C ++ P+FQY
Sbjct: 29 IKDDVNAWGDHGLLSSQLHPDFPAEPYLFLFYSVAPEG-WAGECERI--VKGLPFCEQNAVLERLKIDVTVDDDGMCSDWSFSDSENNRVRLMEDWCSSAGAHHNAAMEFYTDGSLLVANGDSSQAPFDRGYPAEDGTPVDLCYLDDEKQPQGYFKAQNEAFLQGHLIRIHAEATMYDSEDLPLTELDYDVWAKGLRNPFRLDIDRQTGDIYLGDVGDSTAEEINILRNPLDAAASSLPANLGWPCVEG----GGIPLPTYNWITQSCDVNDDNNNCDICKAIFACTAEALGDVDLCDPAYVPPSFQY 329
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.570e-41 Identity = 115/319 (36.05%), Postives = 151/319 (47.34%), Query Frame = 1
Query: 475 IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-PNNQWQDSC---------TLPPDADGFSYCNTTQRLHRF----DFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTK---AEMNTPSLWPLNFGWPCLEGRADKAGPTKDDF-AWLKNTCNVTAGEECGICDSVWPCADGVNSANCTTSFRAPAFQYR-GPID 1374
IKD VY DHG HP FP P ++I Y+++ P N WQD C T PPD YC T +L R D T K +Q L +DWCS++ +H G I W + +MI +GDG+ D+GQ D C DP QG F Q+ +L+GK L ++LKNG L DY+ ++KG R P+ V+P TGD+ IGDVGS +WEEIN + A+ P NFGWPC+EG D + WL+ A C V+ DG +F P F YR G +D
Sbjct: 81 IKDQVYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPKKVAMTNPPDTR--PYCKTMAKLVRLKVDPDLTSAKF------------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQ-DECTDPKGPKDQGVFTAQKDAYLRGKFLHISPAAVLKNGYLQGGQDYSQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNPLSADYRKP-----NFGWPCVEG----VDAVSDIYQTWLR------AEGLLATCQDVY---DG--------NFTKPVFSYRYGAVD 358
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A4D9D361_9STRA (GSDH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D361_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.230e-39 Identity = 101/307 (32.90%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 304 TILNDVFTADTISLIPTGTRRMETRFSPCSDHLF--IIDKSGNFIAQSTVVDESTFKFTIKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-PNNQWQDSCT-------LPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLILNTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSL-WPLNFGWPCLEG 1191
T+ ++++ + +P G ++ T P H++ I KS ++ +T++D I + VY DHG +HP FP P +FI Y+A+ P W D+C + AD YC T ++ R +T D F + L DWC+++ +H G + + + +MI +GDG+ D+GQ D C DP QG F Q+ +L+GK ++ K SLLK+ L N DY ++++G R P+ + ++P TGDV GDVGS +WEEIN + N L + +NFGWPC+EG
Sbjct: 44 TVWDNIWGVVQVVFLPGG--KVMTVHKPGELHVYDSIFSKSQDY---TTILD-------INEEVYSWWDHGLLSAAVHPDFPQKPYLFIAYSAEYPGKPWNDNCEVDYRLSHMTTPADTRPYCKTMAKIIR----LTVDEDFTTATF----DAELFHDWCTSTYTHHVGTMNFLEDGSMIYGAGDGSHFQGIDHGQPQ-DECTDPQGPKDQGVFLSQKDGYLRGKFIVIKPESLLKDEHLQANVDYTVISRGARNPFRSTIDPMTGDVFFGDVGSSVWEEINHIP----NPLDLDYVMNFGWPCIEG 325
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS) HSP 1 Score: 158 bits (400), Expect = 4.240e-38 Identity = 105/277 (37.91%), Postives = 137/277 (49.46%), Query Frame = 1
Query: 400 LFIIDKSGNF-IAQSTVVDESTFKFTIKDVVYETA----DHGPTGMLIHPSFPATPSIFIFYTAD-------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLIL-NTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
+F+ +K G + S DE+ F + D YE D G G+ + ++P P +++FY+ + P+ D T P AD SYC T L R V + QVLV DWCS S SH G++ W + LT+GDGA D G D CY+ QG FR Q E+LQGKLL F SL+ + L L N D+ I+AKGLR PY V+P+TGD+ +GDVGS WEEIN V + NFGWPC EG
Sbjct: 59 VFLTEKDGRIRLYPSIEADENDFVYVF-DQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEG 323
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A3P3Y1N1_PLABS (PKD domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1N1_PLABS) HSP 1 Score: 158 bits (400), Expect = 4.660e-38 Identity = 105/277 (37.91%), Postives = 137/277 (49.46%), Query Frame = 1
Query: 400 LFIIDKSGNF-IAQSTVVDESTFKFTIKDVVYETA----DHGPTGMLIHPSFPATPSIFIFYTAD-------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEFLQGKLLLFKATSLLKNGKLIL-NTDYNIVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
+F+ +K G + S DE+ F + D YE D G G+ + ++P P +++FY+ + P+ D T P AD SYC T L R V + QVLV DWCS S SH G++ W + LT+GDGA D G D CY+ QG FR Q E+LQGKLL F SL+ + L L N D+ I+AKGLR PY V+P+TGD+ +GDVGS WEEIN V + NFGWPC EG
Sbjct: 59 VFLTEKDGRIRLYPSIEADENDFVYVF-DQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP--ADRHSYCGTAAHLVRVRVDVPRRKG--------TIEQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHMEYLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEG 323
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A7W7WR06_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Micromonospora polyrhachis TaxID=1282883 RepID=A0A7W7WR06_9ACTN) HSP 1 Score: 111 bits (277), Expect = 2.450e-22 Identity = 94/314 (29.94%), Postives = 135/314 (42.99%), Query Frame = 1
Query: 358 TRRMETRFSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDV--CYDPTKKLPQGRFRPQRSEF----------------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPL-NFGWPCLEGRADKAG 1209
TR + FSP +F+ K+G + D + F ++ VY+ D G G+ + P FPA P +++ Y+ D + D+C C + R+ R DG N QVL+ DWC SH G++ + + +T GDGA + TDYGQ C DP + G P +E L G L+ T+ L + + D N IVA GLR PY A P T +V +GDVG ++WEEIN +T P+ P+ N+GWPC EG + G
Sbjct: 40 TRPTKLVFSP-DGRIFVGQKNGIIKVFDGLSDTTATVFADLRSNVYDFEDLGLIGLALAPDFPADPWVYVSYSYDGMIGGSAPTYNDACAA------IGSCPASSRVSRL------RADG---NVMTGTEQVLLHDWCQQIESHSIGDLAFGPDGALYVTGGDGASGTFTDYGQAGNPTNPCGDPPAPIG-GAMTPPTAEGGALRSQDVRTPADPTGLSGTLIRINPTTGAALPDNPWASSADANTRRIVAYGLRNPYRWAFRPGTSEVWLGDVGWRVWEEINRITD-----PAGGPVRNYGWPCYEGNVRQNG 331
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A0H5CPG9_9PSEU (Cytochrome c551/c552 n=1 Tax=Alloactinosynnema sp. L-07 TaxID=1653480 RepID=A0A0H5CPG9_9PSEU) HSP 1 Score: 106 bits (265), Expect = 9.350e-21 Identity = 91/315 (28.89%), Postives = 134/315 (42.54%), Query Frame = 1
Query: 367 METRFSPCSDHLFIIDKSGNFIAQSTVVDES-TFKFTIKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----------PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDV--CYDP------TKKLPQ---GRFRPQRSEFLQGKLLL----FKATSLLKNGK----LILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEGRADKAG 1209
M FSP +F+ +KSG + D + T ++ V+ AD G +++ P+FP PS+++ Y D P + D+C PP A G C + RL + + T G QVL+EDWC SH G++ + + + GDGA DYGQ + C DP + +P G R Q + + L L + + G + + D N I+A GLR P+ A+ P T ++ +GDVG WEEIN +T NFGWPC EG + G
Sbjct: 1 MAVEFSP-DGRVFVAEKSGLVKVFDGLADTTPTIYADLRAKVHNFADRGLMSLVLAPTFPTDPSVYVLYAHDAAIGGTAPRWGPGDGTNDNCPSPPGATGDG-CVISGRLSKLN------TSG--------AEQVLIEDWCQQYPSHSVGDLAFGPDGFLYASGGDGASYVFADYGQDGNPLNPCGDPPGGVGGVQTVPTAEGGALRSQDVQTMTDPLTLDGTVIRIDPVTGQGAPGNPMAGSADANARRIIAAGLRNPFRFALRPGTSELWLGDVGWGTWEEINRITSPTDGAVD----NFGWPCKEGTSPNDG 295
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: UPI001A615B4B (PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa iriomotensis TaxID=234613 RepID=UPI001A615B4B) HSP 1 Score: 102 bits (254), Expect = 2.210e-19 Identity = 88/299 (29.43%), Postives = 128/299 (42.81%), Query Frame = 1
Query: 379 FSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTADPN-----NQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQR--VGDVCYDP------TKKLPQGRFRPQRSEF---------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPLNFGWPCLEG 1191
F+P + I K+G + D + F + V+ D G G+ + P FPATP +++ YT D + D C + D C + R+ R T QVL+ DWC +H G+I + + ++ GDGA P+ DYGQR V + C DP T P RS+ L G + + L + + ++D N I+A GLR PY A P T +V GDVG ++WEEI+ + +N+P NFGWPC EG
Sbjct: 57 FAP-DGRILIAQKNGVIKIYDNLSDTTPTVFADLSQQVFTYGDLGLLGLAVPPDFPATPWVYVSYTYDGQIGGSAPTYNDRCAVLGD------CIVSNRVSRLRIAGDVMTGSE---------QVLLHDWCHLYETHAVGDIGFGPDGALYVSGGDGASPAFPDYGQRGTVTNACGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPNTGAALPDNPMAGSSDPNTRRILAYGLRNPYRWAFRPGTSEVWFGDVGWRLWEEIDRLPDP-LNSPVE---NFGWPCYEG 335
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A7X0VBM4_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardioides luti TaxID=2761101 RepID=A0A7X0VBM4_9ACTN) HSP 1 Score: 100 bits (249), Expect = 7.260e-19 Identity = 90/303 (29.70%), Postives = 132/303 (43.56%), Query Frame = 1
Query: 379 FSPCSDHLFIIDKSGNFIAQSTVVDESTFKFTIKDVVYETA-DHGPTGMLIHPSFPATPSIFIFYT-----ADPN--------NQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQRVGDVCYDPTKKLPQGRFRPQRSEF----LQGKLLLFKATSLL--KNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWP---LNFGWPCLEGRADKAG 1209
F+P +F+ +K+G + D F +V E D G G+ + P FPA P +++ Y DP Q+ D C PP AD C + R+ R + DG N QVLVED+C SH G + + + ++G+GA + DYGQ G+ C DP + R + R+ L G ++ + L L + D N I+A G R P+ A P T V++GDVGS +EE+NT+ P+ P ++FGWPC EG G
Sbjct: 56 FAP-DGRVFVAEKTGVIKVFDGLDDTDADVFADLNVNVENFYDRGLLGLTLDPEFPARPYVYVSYAYNHVLGDPAPAPRWGEPGQYYDDCPDPPGADDQG-CVVSGRVSRL------TADG---NQVTGEEQVLVEDYCLQFPSHATGTVAFGPDGALYASAGEGANYNYEDYGQ-TGNPCGDPVDEGGALRAQDLRTGGDPVGLNGTVIRIDPDTGLGAPGNPLASSPDLNARRIIADGFRNPFRFAFRPGTSQVVVGDVGSFQYEELNTL-------PTTTPDQVVDFGWPCYEGAGRNPG 339
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Match: A0A1H3RCP1_9ACTN (Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3RCP1_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 2.230e-18 Identity = 98/358 (27.37%), Postives = 144/358 (40.22%), Query Frame = 1
Query: 208 SVGMRAFSRSSLGLALAGSILQQQHVAHAAEPTILNDVFTADTISLIPTG-TRRMETRFSPCSDHLFIIDKSGNFIAQSTVVDESTFKFT-IKDVVYETADHGPTGMLIHPSFPATPSIFIFYTAD-----PNNQWQDSCTLPPDADGFSYCNTTQRLHRFDFTVTKSTDGRCTNFAPAGNQVLVEDWCSTSSSHGNGNIEWWDGANMILTSGDGAMPSQTDYGQR--VGDVCYDP------TKKLPQGRFRPQRSEF---------LQGKLLLFKATS--LLKNGKLILNTDYN---IVAKGLRQPYVNAVNPWTGDVLIGDVGSKIWEEINTVTKAEMNTPSLWPL-NFGWPCLEG 1191
S+ +R F L L L + V A P T ++ TG + + F+P + I K+G ++ D + F + V+ D G M + P FP +P +++ YT D + D C + D C + R+ R N QVL+ DWC +H GN+ + + ++ GDGA PS DYGQR V + C DP T P RS+ L G + + L + + ++D N I+A GLR PY P T +V GDVG ++WEEI+ + P P+ NFGWPC EG
Sbjct: 2 SLSVRRFLAGLLTLVLGAPLT----VGALAAPAAAGPPPAGFTEQVVMTGLSSPTKLVFAP-DGRILIAQKNGVIKIYDSLSDTTPTVFADLSSEVFTYGDLGLLSMAVPPDFPDSPYVYVSYTYDGPIGGSAPTYNDQCAVLGD------CVVSNRVSRLRIAG---------NVMTGSEQVLLHDWCHVYETHAVGNVGFGPDGALYVSGGDGASPSFPDYGQRGAVTNPCGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPATGAALPDNPMAGSSDPNTRRILAYGLRNPYRWVFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNGPVENFGWPCYEG 334 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1559.1.1 >prot_P-wetherbeei_contig1559.1.1 ID=prot_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=386bp MRAFSRSSLGLALAGSILQQQHVAHAAEPTILNDVFTADTISLIPTGTRRback to top mRNA from alignment at P-wetherbeei_contig1559:262..5027- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1559.1.1 ID=mRNA_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4766bp|location=Sequence derived from alignment at P-wetherbeei_contig1559:262..5027- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1559:262..5027- >mRNA_P-wetherbeei_contig1559.1.1 ID=mRNA_P-wetherbeei_contig1559.1.1|Name=mRNA_P-wetherbeei_contig1559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1158bp|location=Sequence derived from alignment at P-wetherbeei_contig1559:262..5027- (Phaeothamnion wetherbeei SAG_119_79)back to top |