mRNA_P-wetherbeei_contig15589.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15589.1.1
Unique NamemRNA_P-wetherbeei_contig15589.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15589.1.1 vs. uniprot
Match: A0A7S0TAN7_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAN7_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.880e-5
Identity = 35/98 (35.71%), Postives = 49/98 (50.00%), Query Frame = 1 
Query:    1 KFFPYFNFVGRLDDGYAAPAHAEALLRLVGAWEAYGASGWERAGTGGCSSAAEFMGRHGVTAMTSHVTPGRR----ELYYSPALLRAVQEAYGADYTL 282
            KF   ++FVGR ++      HAE+LLR +G W+ +GASGW        +  A  + R  + A +S    G      +LY  P L  AV+ AY  DY L
Sbjct:  251 KFAHLYHFVGRYEN---IREHAESLLRALGLWDDFGASGWAPPLGKNHTPPASRVPRDSIFARSSSHKTGSASKYADLYAPPGLEAAVRAAYSMDYDL 345
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15589.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0TAN7_9STRA7.880e-535.71Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15589contigP-wetherbeei_contig15589:198..509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog44056.XP_009035545.1
Preferred nameCHST10
PFAMsSulfotransfer_2
Model size312
Max annot lvl2759|Eukaryota
KEGG rclassRC00007,RC00231
KEGG koko:K01017,ko:K04742,ko:K07779,ko:K08105,ko:K09672,ko:K09673,ko:K09674
KEGG ReactionR02180,R10873
KEGG Pathwayko00513,ko00515,ko00532,ko01100,map00513,map00515,map00532,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0000902,GO:0000904,GO:0001501,GO:0001537,GO:0002062,GO:0002063,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006082,GO:0006508,GO:0006518,GO:0006790,GO:0006807,GO:0006928,GO:0006935,GO:0007155,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007517,GO:0007585,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007616,GO:0008045,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010646,GO:0010648,GO:0010817,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016232,GO:0016485,GO:0016486,GO:0016740,GO:0016782,GO:0017015,GO:0017076,GO:0017144,GO:0019538,GO:0019752,GO:0022008,GO:0022610,GO:0023051,GO:0023057,GO:0030030,GO:0030154,GO:0030166,GO:0030173,GO:0030182,GO:0030203,GO:0030204,GO:0030205,GO:0030206,GO:0030208,GO:0030326,GO:0030512,GO:0030554,GO:0031090,GO:0031175,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032989,GO:0032990,GO:0033036,GO:0033037,GO:0034481,GO:0034641,GO:0034645,GO:0035107,GO:0035108,GO:0035113,GO:0036094,GO:0036342,GO:0040007,GO:0040011,GO:0042127,GO:0042221,GO:0042301,GO:0042330,GO:0042445,GO:0042446,GO:0042733,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0047756,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048589,GO:0048598,GO:0048666,GO:0048667,GO:0048699,GO:0048701,GO:0048703,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050650,GO:0050651,GO:0050654,GO:0050655,GO:0050656,GO:0050659,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051179,GO:0051216,GO:0051604,GO:0060173,GO:0060548,GO:0061061,GO:0061448,GO:0061564,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0072330,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0097159,GO:0097367,GO:0097485,GO:0098588,GO:0098791,GO:0120036,GO:0120039,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1903510,GO:1903844,GO:1903845,GO:1904888
Exons1
Evalue1.03e-09
EggNOG OGsKOG4651@1|root,KOG4651@2759|Eukaryota
EC2.8.2.35,2.8.2.5
Descriptionchondroitin 4-sulfotransferase activity
Cds size312
COG categoryM
BRITEko00000,ko00001,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186061.0778255-CDS-P-wetherbeei_contig15589:197..5091683186061.0778255-CDS-P-wetherbeei_contig15589:197..509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15589 198..509 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15589.1.1prot_P-wetherbeei_contig15589.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15589 198..509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15589.1.1

>prot_P-wetherbeei_contig15589.1.1 ID=prot_P-wetherbeei_contig15589.1.1|Name=mRNA_P-wetherbeei_contig15589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp
KFFPYFNFVGRLDDGYAAPAHAEALLRLVGAWEAYGASGWERAGTGGCSS
AAEFMGRHGVTAMTSHVTPGRRELYYSPALLRAVQEAYGADYTLLRLFDE
QQT*
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mRNA from alignment at P-wetherbeei_contig15589:198..509+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15589.1.1 ID=mRNA_P-wetherbeei_contig15589.1.1|Name=mRNA_P-wetherbeei_contig15589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig15589:198..509+ (Phaeothamnion wetherbeei SAG_119_79)
AAGTTCTTTCCATACTTCAATTTTGTCGGCCGTCTCGACGACGGCTACGC
CGCCCCGGCGCACGCGGAGGCGCTCCTGCGGCTTGTCGGCGCCTGGGAGG
CCTACGGCGCGTCGGGCTGGGAGCGTGCGGGCACCGGGGGCTGCAGCTCG
GCGGCAGAATTCATGGGTCGCCACGGTGTAACTGCCATGACCTCGCACGT
GACCCCCGGCCGGCGGGAGCTGTACTACTCGCCGGCTCTGCTGCGCGCCG
TGCAGGAGGCGTACGGTGCTGACTACACGCTGCTCCGCCTGTTTGACGAG
CAGCAGACATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15589:198..509+

>mRNA_P-wetherbeei_contig15589.1.1 ID=mRNA_P-wetherbeei_contig15589.1.1|Name=mRNA_P-wetherbeei_contig15589.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig15589:198..509+ (Phaeothamnion wetherbeei SAG_119_79)
AAGTTCTTTCCATACTTCAATTTTGTCGGCCGTCTCGACGACGGCTACGC
CGCCCCGGCGCACGCGGAGGCGCTCCTGCGGCTTGTCGGCGCCTGGGAGG
CCTACGGCGCGTCGGGCTGGGAGCGTGCGGGCACCGGGGGCTGCAGCTCG
GCGGCAGAATTCATGGGTCGCCACGGTGTAACTGCCATGACCTCGCACGT
GACCCCCGGCCGGCGGGAGCTGTACTACTCGCCGGCTCTGCTGCGCGCCG
TGCAGGAGGCGTACGGTGCTGACTACACGCTGCTCCGCCTGTTTGACGAG
CAGCAGACATGA
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