mRNA_P-wetherbeei_contig1558.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1558.1.1
Unique NamemRNA_P-wetherbeei_contig1558.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: A0A835ZF72_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF72_9STRA)

HSP 1 Score: 278 bits (710), Expect = 7.010e-79
Identity = 137/221 (61.99%), Postives = 158/221 (71.49%), Query Frame = 2 
Query:  485 YANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            Y   AL+NHPDKGGDP+KFKEISMAY+VLSD +KRK+YDQYGK+G+ EEGGPGH+ +DIFSMFF           PR+GENLVHPL+VSLEDLYNGKTCRLAI  N+LC  C GRGGK GAE+         VQ+QYRQIGPGMVQ+MQ  C                         KERKVLEV++T GMKNG+KITFH EADE PG++PGDVVFV+Q K
Sbjct:   53 YRKLALKNHPDKGGDPDKFKEISMAYDVLSDAQKRKMYDQYGKDGVNEEGGPGHTPDDIFSMFFGGGGRRQSG--PRRGENLVHPLRVSLEDLYNGKTCRLAINRNRLCSACAGRGGKEGAERPCGACNGHGVQIQYRQIGPGMVQKMQATCSDCSGEGKVINPRDRCRECQGKKVVKERKVLEVHVTPGMKNGEKITFHEEADETPGMLPGDVVFVIQSK 271
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: A0A836CBH1_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH1_9STRA)

HSP 1 Score: 274 bits (700), Expect = 1.440e-77
Identity = 153/221 (69.23%), Postives = 176/221 (79.64%), Query Frame = 2 
Query:  485 YANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            Y   AL+NHPDKGGDP+KFK+I+MAY+VLSDP+KRK+YDQYGK+G+ EEGGPGHS +DIFSMFF           PR+ ++LVHPLKVSLEDLYNGKTCRLAI  +K+C  CEGRGGK GAE XXXXXXX  VQ+QYRQIGPGMVQ++Q   XXXXXXXXXX               KERKVLEVNIT GMK+GQK+TFH EADEAPG++PG+VVFVVQEK
Sbjct:   51 YRKLALKNHPDKGGDPDKFKDINMAYDVLSDPQKRKMYDQYGKDGVNEEGGPGHSPDDIFSMFFGGGGRQPSG--PRRSDDLVHPLKVSLEDLYNGKTCRLAINRDKVCAACEGRGGKAGAEXXXXXXXXHGVQIQYRQIGPGMVQKLQATXXXXXXXXXXXNARDKCRECQGKKVVKERKVLEVNITPGMKSGQKLTFHEEADEAPGVLPGNVVFVVQEK 269
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: D7FQK4_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK4_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.770e-75
Identity = 138/227 (60.79%), Postives = 160/227 (70.48%), Query Frame = 2 
Query:  470 QMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPG-HSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            ++   Y   AL+NHPDKGGDPE FKEI+MAYEVLSDPEKRKLYD+YGKEG+  EGG G  + EDIFSMFF           PRKGE+  H LKV+LEDLYNGKTCRLA+T NK+C  CEG GGK GAEK       R VQVQ+RQIGPGMVQQ+Q AC                          ERKVLEV+IT+GM+NGQKITFHGEADEAPG++PGD++F+V+EK
Sbjct:   52 EIKKAYRKLALKNHPDKGGDPEVFKEITMAYEVLSDPEKRKLYDKYGKEGVESEGGAGGQTPEDIFSMFFGGGGRRGG---PRKGEDDRHKLKVNLEDLYNGKTCRLAVTRNKVCTVCEGIGGKPGAEKACEKCQGRGVQVQFRQIGPGMVQQLQSACSSCRGEGKVINERDKCKTCSAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGVVPGDIIFIVEEK 275
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: W7TUD3_9STRA (HSP40/DnaJ heat shock protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUD3_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.520e-69
Identity = 143/221 (64.71%), Postives = 161/221 (72.85%), Query Frame = 2 
Query:  485 YANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            Y   AL+NHPDKGGDPEKFKEI+MAYEVLSDPEKRK YDQYGK+GL E  G  H+ EDIFSMFF           PRKGE++ HPLKV+L+DLYNGK C LAI  +KLCG CEG GGK GAE+       R V VQ RQIGPGMVQQ Q+  XXXXXXXXXX               KERK+LEV+I +GMK+ QKITFHGEADEAPG IPGD++F+VQEK
Sbjct:   92 YRKLALKNHPDKGGDPEKFKEITMAYEVLSDPEKRKRYDQYGKDGLEE--GSMHNPEDIFSMFFGGGRRGPSG--PRKGEDIRHPLKVTLDDLYNGKKCHLAINRDKLCGACEGLGGKKGAERSCSTCNGRGVTVQLRQIGPGMVQQSQMPXXXXXXXXXXXSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKITFHGEADEAPGTIPGDIIFLVQEK 308
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: K3XBN2_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3XBN2_GLOUD)

HSP 1 Score: 249 bits (635), Expect = 6.310e-69
Identity = 127/226 (56.19%), Postives = 151/226 (66.81%), Query Frame = 2 
Query:  470 QMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            ++   Y   AL+NHPDKGGDPE FK I++AYEVLSDPEKR+LYDQYG+EGL + GG G  A D+FS FF           P+KGE+L HPLKVSLEDLYNGKT +LA+  + LC  CEGRGG  GAEK       R ++VQ RQI PGMVQQMQ  C                         KERKVLEV+I +GM+NGQ+ITF GEAD+APG +PGD++FVVQEK
Sbjct:   46 EIKKAYRKLALKNHPDKGGDPELFKTITVAYEVLSDPEKRELYDQYGEEGL-QNGGGGGDASDLFSQFFRGAQGGRRRTGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCSRCEGRGGAEGAEKTCDTCQGRGMRVQLRQIAPGMVQQMQSVCPDCRGQGKSIRESDRCKHCKGKKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTVPGDIIFVVQEK 270
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: A0A485KM12_9STRA (Aste57867_8968 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KM12_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.750e-68
Identity = 131/253 (51.78%), Postives = 162/253 (64.03%), Query Frame = 2 
Query:  389 GEDKPLSPECIS*HLSVRARLLSCSFWQMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            G  KP+        L V     + S   +   Y   AL+NHPDKGGDPE FK+I++AYE LSDPEKR+LYDQYG+EGL + GG GH   DIFS  F           P++GE+L HPLKVSLEDLYNGKT +LA+  + LCG C GRGG  GAE   XXX  R +++Q+RQIGPGMVQQ+Q  C                         KERKVLEV+I +GM+NGQ+ITF GEAD+APG++PGD++FV+QEK
Sbjct:   22 GPSKPVDNTTFYETLGVPK---NASAADIKKAYRKLALKNHPDKGGDPELFKDITVAYEALSDPEKRELYDQYGEEGLQQGGGGGHPGADIFSQMFGGRGGGRPRG-PQRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGGCSGRGGPEGAETTCXXXNGRGMRIQHRQIGPGMVQQVQSVCPDCRGQGKSIRESDRCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGVLPGDIIFVIQEK 270
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: A0A6G0WI92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI92_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.120e-67
Identity = 131/253 (51.78%), Postives = 158/253 (62.45%), Query Frame = 2 
Query:  389 GEDKPLSPECIS*HLSVRARLLSCSFWQMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            G  KP+        L V     + S   +   Y   AL+NHPDKGGDPE FK I++AYEVLSDPEKR+LYDQYG+EGL ++GG GH   DIFS  F           P +GE+L HPLKVSLEDLYNGKT +LA+  + LCG+C GRGG  GAE        R +++Q RQIGPGMVQQ+Q  C                         KERKVLEV+I +GM+NGQ+ITF GEAD+APG IPGD++FVVQEK
Sbjct:   21 GPSKPVDNSAYYETLGVPK---TASAADIKKAYRKLALKNHPDKGGDPELFKNITVAYEVLSDPEKRELYDQYGEEGL-QQGGGGHPGADIFSQMFGGRGGQRSRG-PARGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGSCFGRGGPEGAETTCNTCNGRGMRIQMRQIGPGMVQQVQSVCPDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTIPGDIIFVVQEK 268
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: A0A1V9Y7R5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7R5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.100e-66
Identity = 131/226 (57.96%), Postives = 156/226 (69.03%), Query Frame = 2 
Query:  470 QMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            ++   +   AL+NHPDKGGDPE FK+I++AYEVLSDPEKR+LYDQYG+EGL   GG    A DIFS  F           P+KGE+L HPLKVSLEDLYNGKT +LA+  + LCG CEGRGG VGAEK       R +++Q+RQI PGMVQQ+Q  C  XXXXX                  KERKVLEV+I +GM+NGQ+ITF GEAD+APG I GD+VFVVQEK
Sbjct:   45 EIKKAFRKLALKNHPDKGGDPELFKDITVAYEVLSDPEKRELYDQYGEEGLQGGGGXXXGA-DIFSQMFGGRGGGRPRG-PQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCEGRGGAVGAEKTCDTCNGRGMRIQHRQIAPGMVQQVQSVCPDXXXXXKTIRESDRCKACKGNKVTKERKVLEVHIEKGMRNGQRITFTGEADQAPGTIAGDIVFVVQEK 268
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: F0WJP4_9STRA (Uncharacterized protein AlNc14C124G6770 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJP4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.960e-66
Identity = 131/226 (57.96%), Postives = 159/226 (70.35%), Query Frame = 2 
Query:  470 QMDSIYANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            ++   Y   AL+NHPDKGGDPE FK +++AYEVLSDPEKR+LYDQYG+EGL + G  G  A D+FS FF           P+KGE+L HPLKVSLEDLYNGKT +LA+  + LCG C+GRGG  GAEK       R ++VQ RQIGPGMVQQMQ   XXXXXXX                  KERKVLEVNI +GM++GQ+ITF GEAD+APG++PGD++FV+QEK
Sbjct:   44 EIKKSYRKLALKNHPDKGGDPELFKHMTVAYEVLSDPEKRELYDQYGEEGL-QNGAGGADASDLFSQFFKGGSRRRAG--PQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCDGRGGAEGAEKTCDTCQGRGMRVQLRQIGPGMVQQMQSVXXXXXXXXKTIRESDRCKTCKGKKVTKERKVLEVNIEKGMRHGQRITFSGEADQAPGVLPGDIIFVIQEK 266
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BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Match: W4GJN7_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJN7_9STRA)

HSP 1 Score: 240 bits (612), Expect = 7.250e-66
Identity = 122/221 (55.20%), Postives = 149/221 (67.42%), Query Frame = 2 
Query:  485 YANSALQNHPDKGGDPEKFKEISMAYEVLSDPEKRKLYDQYGKEGLGEEGGPGHSAEDIFSMFFXXXXXXXXXXXPRKGENLVHPLKVSLEDLYNGKTCRLAITHNKLCGTCEGRGGKVGAEKXXXXXXXRRVQVQYRQIGPGMVQQMQVACXXXXXXXXXXXXXXXXXXXXXXXXAKERKVLEVNITRGMKNGQKITFHGEADEAPGIIPGDVVFVVQEK 1147
            Y   AL+NHPDKGGDPE FK+I++AYEVLSDPEKR+LYD+YG+EGL + GG GH   DIFS  F           P++GE+L HPLKVSLEDLYNGKT +LA+  + LCG C GRGG  GAE        R +++Q+RQI PGMVQQ+Q  C                         KERKVLEV+I +GM+NGQ+ITF GEAD+APG++ GD+VFVVQEK
Sbjct:   51 YRKLALKNHPDKGGDPELFKDITVAYEVLSDPEKRELYDKYGEEGLQQGGGGGHPGADIFSQMFGGGGGRPRG--PQRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGGCAGRGGPEGAETSCGTCNGRGMRIQHRQIAPGMVQQVQSVCPDCRGQGKSIRESDRCKVCRGNKVTKERKVLEVHIEKGMRNGQRITFKGEADQAPGLVAGDIVFVVQEK 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1558.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF72_9STRA7.010e-7961.99Heat shock protein 40 n=1 Tax=Tribonema minus TaxI... [more]
A0A836CBH1_9STRA1.440e-7769.23Heat shock protein 40 n=1 Tax=Tribonema minus TaxI... [more]
D7FQK4_ECTSI1.770e-7560.79Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
W7TUD3_9STRA1.520e-6964.71HSP40/DnaJ heat shock protein n=3 Tax=Monodopsidac... [more]
K3XBN2_GLOUD6.310e-6956.19Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A485KM12_9STRA3.750e-6851.78Aste57867_8968 protein n=2 Tax=Aphanomyces TaxID=1... [more]
A0A6G0WI92_9STRA4.120e-6751.78Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Y7R5_9STRA1.100e-6657.96Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
F0WJP4_9STRA1.960e-6657.96Uncharacterized protein AlNc14C124G6770 n=1 Tax=Al... [more]
W4GJN7_9STRA7.250e-6655.20Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1558contigP-wetherbeei_contig1558:283..5765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121934.AUDX01000003_gene865
PFAMs5TM-5TMR_LYT,HATPase_c,HisKA,PAS_4,PTS_EIIB,PTS_EIIC
Model size4821
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.96e-59
EggNOG OGsCOG1263@1|root,COG1263@2|Bacteria
DescriptionPTS System
Cds size1605
COG categoryG
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186060.749178-UTR-P-wetherbeei_contig1558:282..2941683186060.749178-UTR-P-wetherbeei_contig1558:282..294Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1558 283..294 -
1683186060.7772295-UTR-P-wetherbeei_contig1558:2080..42751683186060.7772295-UTR-P-wetherbeei_contig1558:2080..4275Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1558 2081..4275 -
1683186060.7870498-UTR-P-wetherbeei_contig1558:4756..57651683186060.7870498-UTR-P-wetherbeei_contig1558:4756..5765Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1558 4757..5765 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186060.7587798-CDS-P-wetherbeei_contig1558:294..18461683186060.7587798-CDS-P-wetherbeei_contig1558:294..1846Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1558 295..1846 -
1683186060.7677646-CDS-P-wetherbeei_contig1558:2027..20801683186060.7677646-CDS-P-wetherbeei_contig1558:2027..2080Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1558 2028..2080 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1558.1.1prot_P-wetherbeei_contig1558.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1558 295..2080 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1558.1.1

>prot_P-wetherbeei_contig1558.1.1 ID=prot_P-wetherbeei_contig1558.1.1|Name=mRNA_P-wetherbeei_contig1558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=535bp
MPKVALIGSSGGGKATSGQDDPAAVVRTMRNELGRAGIALNYVQFVAARS
PLDLAEESTFAELWVLDASRQLKRSVSGGLNAVNATASEVHDATIAAAIR
GAELDGLVVISCDPGRTNQKALLAARDADVPVAGTGGSSLGEALALGVNI
VGCSGGSVATTNESRAMTAAASLARHWGLPYDPFPALSTGSSCCGGDSVS
IAGLISSLNSCLPAFLAAMLLKRGTTLLAAAPLPAGAAADMLAAADAATH
VLPILVGAVAARDQSPQLGETALMAGAIAAAACDAGVGGGLFSGCVAGLV
MSRAAAYAITRAFPATAVNAFAAAAGGGAAGMLGRTLRPVLLAVGAISVT
AVQQFLALPIAARAAAGAALGVATCWGSQVGYYHAVMLPLILLEGEDGGY
TLLGAFDMVVLCAVSAGICTATCWRPWHPKADGRLAARGCRINFIFGDFV
EAAYAFMDRDLWCKAAAYLGAAAGGATLAVGGVKSSAYLPLPLAVLLGDA
PLFGAAAVAVASALPFLIVVIRNGIIPDWKKRQE*
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mRNA from alignment at P-wetherbeei_contig1558:283..5765-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1558.1.1 ID=mRNA_P-wetherbeei_contig1558.1.1|Name=mRNA_P-wetherbeei_contig1558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5483bp|location=Sequence derived from alignment at P-wetherbeei_contig1558:283..5765- (Phaeothamnion wetherbeei SAG_119_79)
CACCAACGAGTTCTACGAGGTTCTCGGCGTGGGAAAAGACGCGACAGACT
CGGACATCAAGAAGGCGTACCGAAAGCTCGCTCTGAAGGTTGGTGTGCGG
TGGACAGGGGGTCGCGGTATTAACCCTCTTCCGTCGATTCTTTCCGAAGC
CTTTTCGCTTTGCTCAACCATTTGCATGGGTGGAAAGGACGGCTTGACGA
AGAATGCTGCCCTTTCGCGTCTCGGCCTTGCTCATCACACACTTGTTCCG
GGATTGACCCGACAATAGACCGTTTTACACTGTTCTCGCGAAATCGCGCA
TCGCTTTCTGCGTGAGCACACTTTCTTTGGGCGATGACTTCGATAACATT
AACGAGGCAAATTTAGGCATTGGTAAATTTAACCGTTCGGCGAAGACAAG
CCTCTCTCTCCTGAGTGCATTTCCTGACATTTGAGCGTGCGGGCCCGGCT
CCTTAGCTGTTCTTTCTGGCAAATGGATTCGATCTATGCGAACTCCGCTT
TGCAGAACCACCCGGATAAGGGCGGCGATCCGGAAAAGTTTAAGGAGATT
TCGATGGCGTACGAGGTGCTCTCCGACCCCGAGAAGCGCAAGCTATACGA
CCAGTACGGCAAGGAGGGGCTCGGCGAGGAAGGCGGCCCGGGTCACTCCG
CCGAAGACATCTTCAGCATGTTCTTCGGTGGCGGGCGGCGTGGCGGCGGC
GGCGGCGGGCCACGCAAGGGTGAGAACCTTGTCCACCCGCTCAAAGTCTC
TCTCGAAGACCTCTACAACGGCAAGACGTGCCGGCTGGCCATCACGCACA
ATAAGCTGTGCGGGACATGCGAGGGCCGCGGTGGCAAGGTTGGCGCCGAA
AAGGTGTGCGAGACATGCCATGGGCGGCGGGTGCAGGTGCAGTACCGCCA
GATCGGGCCCGGCATGGTGCAGCAGATGCAAGTCGCCTGCCCCGACTGCA
AGGGCGAGGGCAAGACCATCAACGAGCGCGACAAGTGCAAGGCCTGCCTC
GGCAGAAAGGTGCGTCAGCAGCAGTTTAGTGTCCGTTGTCGCAGGCCCCT
TTTTCTTTTTGACAAGCTTTGCAGCGATAGAAGGAGGGGGGTAATCGACC
TGTCTGACGCGATTTGAGGCTGTGCATGCTCTCTTTTCTTTCGCAAGTTT
ACCCGGAGGAAATGGAAAATTGATCTGGTTGGGTTACCTTTTCACGACTT
CTATGGTGGAATGGTGGCATTGGTCGCGCATGTATCACTCGTGGTAATTT
ATGCCTCCGCCGCATCTACTTCAGCTGCGAAGGAACTTTACATCGAAGGA
TTATTCGTTGTGGACGACGTGGGCACTTTCTGTACGTTCGCCTCATTTCC
TGCAACCAATCTTTCTTTATTTTTTATTGGGGTGTCTTTCATGGTGCATC
TCGTGTTCCGATTGTTGTCGCTGGATCACTGGCACCTCATCATTCCATCG
AATCCCATCCTGTTACCGACTGATTGGTTGATGATACCAGGTGGCGAAGG
AGCGCAAGGTGCTGGAGGTGAACATCACGCGGGGCATGAAGAACGGGCAA
AAGATCACCTTCCACGGCGAGGCCGACGAGGCGCCCGGCATCATCCCGGG
GGACGTCGTCTTCGTTGTGCAGGAGAAGGTGAGGTGCCCCTGGGAGATTG
CGCTTGGTTGAGAGAGGCAATCGTCTCCTAGGCCAGCTTCTTGGTTATGT
TTTCGCTGTGCGACCGCGATTGCGCTGTCAGCTTGGATCTTTTGGCGCAG
GAACGATGCTTTTGCTCAGCTTCCTTTCAGTATAGTTTGTCTTTCGTGTG
ACTCTTGGATTCTTTCCTCGGTCCAGTTTAGCACAGACGAGAGTCGCTTT
GAGTGAACGTATCGCCGTGTCAAAGCGGCAGGACAATTTTGGTCTCCCTT
CTTTCGTTGGTGACTTCTTGCTTGAGTTTGTTCGTTGTGATGGCGCCTAC
GATTTGGGCTGCCGGCCCTATGTTTGTTTCTCCCTCTCGCTCGTGCCGTT
TCTATCATTTCTTTTCTGAACTTCCTTCCGCCGTCTCCCAAACTGGTTTC
TCCTGCCCCACGTGTCATGCTTTATCGTGCCTCGTCTTAATCCAAAAACA
GGAGCACCCTGTGTTCAAGCGGAAGGGTGCGGACCTGATCCTGGAGAAGA
AGCTGACGCTGACGGAGTCGCTGTGCGGCTACGACTTCATCGTGACACAC
ATGGACGGGCGGCAGCTGCGGTGCAAGAGCCGGTCTGGAGAGGTGACGCG
GCACGACCAGCTGCGCATGATCGACAGCGAGGGCATGCCGCACCACAACA
ATCCTTTCGTGAAGGGCCGCCTCTTCGTTGTCTTCAAGGTCGCCTTCCCC
AAGCAACTCGAGCCCGCCCAGGTAGGTGTTTGTACCTTGCGGTATGCTGC
TTCTCTCTTTTGCTTTTCTCGTCTCTTTCTTTACTTCGTTTTCTTCAAGG
GTTTTCGTTGTAATGTCTCGCTTTTTCACCTTCGTTTGTTGGCTGAGTGG
TGCCGCATGGTGGGTCTTTTGTTTGATTGGAGTCGTGGCTTAGCGAGACA
TAACCATGATTTAGCTTTGTTTTGCAAAAAGCGCCGTCACTGCTGACGGA
ATCGTTTCCTTCCTTTTATCGTCCCTTGGCTGCTTTGTGGACGGCTCTTC
GGCGCGCTCCTCTTCTTTTTTTTGCCCTCTGGGCTTTGCTCGCTGGGCGT
CGCTCCGGTCGTCGACAGGTGACTGCGCTGGAGGCGGTGCTGCCGCCGCG
GCCGCCGGTGGTGGTGACGGGGGAGGAGGAGGAGTGCACGATGGACGACG
TCGATGTGCGCGAGTTTGGCCAGAACGACTCGCATGGAGAGGGCCACGAC
GACGACGACGAGGGCGGCCAGCAGCGCGTCCAGTGCCAGAACATGTAAAA
GGCTCTAAATGGAGGAAGAGGGCGTGGGGCGGAGGGAAGGGCTGAGGAGT
ATGGAAGCGGGGCGACAGGCGCGGCGTGGTTCTTGTCTATTGGCGGTGTC
CACAGGCGATACCCATGGCGGCCACAGCAGTGGCAACAGCTGTGTAATGG
CGGGTAGTGGCGTGGCGCCGAAGCGAAAATCGGCGCCGCGGGTACTCGAA
ACGTGTACGATGGCTCCTTCACAAAGTCAACTTTTGAACCAAACAACGCA
GTGCCTTTTGCTCTCTGTGTGGCCATTCTCTTTACTCAATAATCTACAGC
AACGTGCGCGTCGCTCAAAGACGTGGCACAAAGTAGGCTCAAGAAGCATC
AGCACTGCGCACCTTCCGGGGAAGACGGGGCGGACGTATTCTTTCCCTTT
TGTTGCCTCATAGAAATATCCAGAGAGGTGGCATTCGTTGCGCTCTCTAC
TTTTGCTGCCTCACTCGCGAAGCTCGCTTTGCTGAGATGTCGCATATTTA
AATGACGAGTCTTGAAAAAGCGTCTCTACACAGCACATCAGGGAAGTCAT
GGTGTAAATTTAGTTGTTTACTGCTGCCGAATCGTCGGTAGATCCAGAGA
CAAAGGCGGCAGTCTCTCACTCCCATTTCAGAATTATTTCGCCTCTGGAG
CCCGCCCACCCCGCGCCAAAAACCGCGCCATCTTCCCCGCAGCCGAACCG
AGACCTTGCTACCACCGCTCCCGTAGCGAGAGGCACAGAAAGACACGACA
AAGGACGAGGATAAAGAAACAGTTCGAAGTGGAGCATGCCGAAAGTGGCG
CTCATAGGCTCAAGCGGGGGCGGCAAGGCAACCTCTGGGTACGTTGGTTA
CCCTCCTCCGCAGAACAAGGGGTTAATTTTTGCGTCGACGCAGCTCTGCT
CAGTTCTCTTTACTCTTTGACAGCTCCCCCAAGAAGATTTGTTTGCCCTG
TGAATCCACCTCCTTTCTTCTTCCGTTCTCTCTCTGTTTTCCTTTCTCAC
TGCCACATGCTTTGATCAGCCAAGATGACCCTGCGGCCGTGGTACGAACA
ATGCGAAACGAGCTCGGGCGTGCAGGAATCGCCCTAAACTACGTGCAATT
CGTAGCTGCGAGATCGCCGCTCGACCTCGCCGAAGAATCTACATTCGCCG
AGCTCTGGGTACTCGACGCGTCAAGGCAATTGAAGCGCTCGGTTTCGGGT
GGTCTCAACGCGGTGAATGCAACCGCGTCAGAGGTTCATGACGCCACCAT
CGCTGCTGCCATCCGCGGCGCAGAATTAGACGGACTGGTTGTAATCTCTT
GTGATCCCGGGCGAACGAACCAAAAGGCGCTGCTGGCAGCACGAGATGCA
GACGTTCCGGTTGCCGGCACCGGCGGATCAAGCCTCGGAGAAGCGCTTGC
TTTGGGCGTGAACATTGTTGGATGTAGCGGCGGAAGTGTGGCCACCACCA
ACGAGAGCCGCGCCATGACCGCCGCGGCTAGCCTCGCCCGGCATTGGGGA
CTGCCGTATGACCCTTTCCCAGCACTTTCTACAGGCAGCAGCTGTTGCGG
CGGCGACAGCGTGAGCATTGCAGGATTGATTTCGTCACTAAACAGCTGCC
TGCCTGCCTTCTTGGCCGCCATGCTGCTTAAGCGCGGGACAACCCTGCTG
GCGGCGGCGCCGCTTCCGGCCGGCGCCGCCGCGGACATGCTCGCAGCCGC
CGACGCAGCGACACACGTCCTGCCCATCCTCGTTGGCGCCGTCGCCGCGA
GAGACCAGAGCCCCCAGCTCGGCGAGACTGCGCTCATGGCCGGCGCCATC
GCAGCGGCGGCGTGTGATGCGGGTGTCGGGGGCGGCCTGTTCAGTGGATG
TGTCGCCGGACTTGTCATGTCGCGCGCAGCCGCCTATGCGATAACGCGCG
CGTTTCCTGCGACCGCCGTGAATGCCTTTGCGGCGGCAGCAGGCGGCGGC
GCAGCGGGGATGCTCGGGCGGACGTTGCGACCGGTGCTGCTTGCGGTGGG
CGCCATATCCGTGACTGCGGTGCAGCAATTCTTGGCGCTGCCGATCGCGG
CGCGGGCGGCGGCCGGCGCCGCGCTGGGGGTCGCGACATGCTGGGGCAGC
CAGGTCGGCTACTACCACGCGGTGATGCTTCCGTTAATTTTGCTGGAAGG
GGAGGACGGCGGTTACACCCTTCTTGGCGCGTTCGACATGGTTGTCCTTT
GCGCCGTCAGTGCCGGCATTTGCACGGCGACGTGCTGGCGGCCGTGGCAC
CCAAAAGCGGATGGCCGGCTGGCAGCGCGGGGCTGCCGTATTAACTTCAT
TTTTGGAGACTTTGTAGAGGCCGCGTACGCCTTTATGGATCGCGATCTTT
GGTGCAAAGCGGCCGCCTATTTGGGCGCAGCGGCGGGCGGTGCCACGTTG
GCGGTCGGCGGCGTGAAATCGTCGGCTTATTTGCCGCTGCCGCTGGCCGT
GCTTCTTGGGGACGCGCCGCTTTTTGGAGCGGCGGCCGTGGCTGTAGCGT
CCGCTTTGCCTTTTTTGATCGTCGTTATTAGAAACGGGATCATTCCCGAC
TGGAAGAAGCGGCAGGAATAAGAGAGCGTTACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1558:283..5765-

>mRNA_P-wetherbeei_contig1558.1.1 ID=mRNA_P-wetherbeei_contig1558.1.1|Name=mRNA_P-wetherbeei_contig1558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1605bp|location=Sequence derived from alignment at P-wetherbeei_contig1558:283..5765- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGAAAGTGGCGCTCATAGGCTCAAGCGGGGGCGGCAAGGCAACCTC
TGGCCAAGATGACCCTGCGGCCGTGGTACGAACAATGCGAAACGAGCTCG
GGCGTGCAGGAATCGCCCTAAACTACGTGCAATTCGTAGCTGCGAGATCG
CCGCTCGACCTCGCCGAAGAATCTACATTCGCCGAGCTCTGGGTACTCGA
CGCGTCAAGGCAATTGAAGCGCTCGGTTTCGGGTGGTCTCAACGCGGTGA
ATGCAACCGCGTCAGAGGTTCATGACGCCACCATCGCTGCTGCCATCCGC
GGCGCAGAATTAGACGGACTGGTTGTAATCTCTTGTGATCCCGGGCGAAC
GAACCAAAAGGCGCTGCTGGCAGCACGAGATGCAGACGTTCCGGTTGCCG
GCACCGGCGGATCAAGCCTCGGAGAAGCGCTTGCTTTGGGCGTGAACATT
GTTGGATGTAGCGGCGGAAGTGTGGCCACCACCAACGAGAGCCGCGCCAT
GACCGCCGCGGCTAGCCTCGCCCGGCATTGGGGACTGCCGTATGACCCTT
TCCCAGCACTTTCTACAGGCAGCAGCTGTTGCGGCGGCGACAGCGTGAGC
ATTGCAGGATTGATTTCGTCACTAAACAGCTGCCTGCCTGCCTTCTTGGC
CGCCATGCTGCTTAAGCGCGGGACAACCCTGCTGGCGGCGGCGCCGCTTC
CGGCCGGCGCCGCCGCGGACATGCTCGCAGCCGCCGACGCAGCGACACAC
GTCCTGCCCATCCTCGTTGGCGCCGTCGCCGCGAGAGACCAGAGCCCCCA
GCTCGGCGAGACTGCGCTCATGGCCGGCGCCATCGCAGCGGCGGCGTGTG
ATGCGGGTGTCGGGGGCGGCCTGTTCAGTGGATGTGTCGCCGGACTTGTC
ATGTCGCGCGCAGCCGCCTATGCGATAACGCGCGCGTTTCCTGCGACCGC
CGTGAATGCCTTTGCGGCGGCAGCAGGCGGCGGCGCAGCGGGGATGCTCG
GGCGGACGTTGCGACCGGTGCTGCTTGCGGTGGGCGCCATATCCGTGACT
GCGGTGCAGCAATTCTTGGCGCTGCCGATCGCGGCGCGGGCGGCGGCCGG
CGCCGCGCTGGGGGTCGCGACATGCTGGGGCAGCCAGGTCGGCTACTACC
ACGCGGTGATGCTTCCGTTAATTTTGCTGGAAGGGGAGGACGGCGGTTAC
ACCCTTCTTGGCGCGTTCGACATGGTTGTCCTTTGCGCCGTCAGTGCCGG
CATTTGCACGGCGACGTGCTGGCGGCCGTGGCACCCAAAAGCGGATGGCC
GGCTGGCAGCGCGGGGCTGCCGTATTAACTTCATTTTTGGAGACTTTGTA
GAGGCCGCGTACGCCTTTATGGATCGCGATCTTTGGTGCAAAGCGGCCGC
CTATTTGGGCGCAGCGGCGGGCGGTGCCACGTTGGCGGTCGGCGGCGTGA
AATCGTCGGCTTATTTGCCGCTGCCGCTGGCCGTGCTTCTTGGGGACGCG
CCGCTTTTTGGAGCGGCGGCCGTGGCTGTAGCGTCCGCTTTGCCTTTTTT
GATCGTCGTTATTAGAAACGGGATCATTCCCGACTGGAAGAAGCGGCAGG
AATAA
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