mRNA_P-wetherbeei_contig15578.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A7C4TWR4_9HYPH (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TWR4_9HYPH) HSP 1 Score: 337 bits (864), Expect = 5.130e-115 Identity = 161/227 (70.93%), Postives = 193/227 (85.02%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRSAQLGGA 684
MA+R++P+ EITPQ+LLRAYACGIFPMAESADDPQLYWIEPQARG+LPLD + +PRRL RT+R+ + V ID+DF+G+I+GCAA RPGRRSTWIN+QIR+LYR+L RQGHCHTVEV +G L GGLYGVALGG +FGESMFS RDASKV LV+L +RLI+GGF+LLDTQFVTDHL QFGT+E+DK+EF +RL A+E ADF+RLP D S VL+II A+ GA
Sbjct: 1 MASRDNPLLEITPQVLLRAYACGIFPMAESADDPQLYWIEPQARGVLPLDGVIVPRRLQRTIRRAAYEVRIDSDFEGIIEGCAASRPGRRSTWINAQIRNLYRELHRQGHCHTVEVWHDGRLAGGLYGVALGGAFFGESMFSNVRDASKVALVYLAARLIYGGFSLLDTQFVTDHLRQFGTIEVDKAEFHARLDAAIEAEADFKRLPLDASARQVLEIIERARAHGA 227
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: V5SBL7_9HYPH (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SBL7_9HYPH) HSP 1 Score: 325 bits (832), Expect = 3.680e-110 Identity = 158/223 (70.85%), Postives = 183/223 (82.06%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRSAQ 672
MA+R+ M EITPQ+LL+AY+CGIFPMAESADDP LYWIEPQ RGILPLD + +PRRLA+TVR VT+DTD++GVI+GCAA R GRRSTWIN +IR LYRDLFR GHCHTVEV E LVGGLYGVALGG +FGESMFS ERDASK+ LVHL RLI GGFT+LDTQFVTDHL QFGT+EID+ F +L +A++L ADF RLP D SG D+LDII + +
Sbjct: 1 MASRDDIMIEITPQVLLKAYSCGIFPMAESADDPALYWIEPQHRGILPLDDVHVPRRLAKTVRAGAMRVTVDTDYEGVIEGCAAERVGRRSTWINGRIRGLYRDLFRLGHCHTVEVWDEDRLVGGLYGVALGGAFFGESMFSYERDASKIALVHLAGRLIAGGFTMLDTQFVTDHLRQFGTIEIDRDAFHLQLDEALKLSADFMRLPLDTSGQDILDIIAATR 223
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: UPI000931835A (leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931835A) HSP 1 Score: 324 bits (830), Expect = 7.410e-110 Identity = 161/227 (70.93%), Postives = 181/227 (79.74%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRSAQLGGA 684
MA+R+ M EITPQ+LL+AY+CGIFPMAESADDP LYWIEPQ RGILPLD + +P+RLARTVRQ V IDT+++GVI+GCAA R GRRSTWINS+IR LYRDLFR GHCHTVEV LVGGLYGVALGG +FGESMFS ERDASK+ LVHL RLI GGFTLLDTQFVTDHL QFGT+EID+ EF L A+ + ADF RLP D SG +LDII AQ A
Sbjct: 1 MASRDDIMIEITPQVLLKAYSCGIFPMAESADDPALYWIEPQHRGILPLDIVHVPKRLARTVRQGALRVAIDTEYEGVIEGCAAERAGRRSTWINSRIRGLYRDLFRLGHCHTVEVWNGDRLVGGLYGVALGGAFFGESMFSYERDASKIALVHLAGRLIAGGFTLLDTQFVTDHLRQFGTLEIDRDEFHRHLDTALGVTADFMRLPLDASGEKILDIIAKAQRAAA 227
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A2W4LG64_9PROT (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4LG64_9PROT) HSP 1 Score: 318 bits (816), Expect = 9.330e-108 Identity = 150/219 (68.49%), Postives = 184/219 (84.02%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDII 660
M AR SP+ EITPQ+LL+AY CGIFPMAESADDPQLYWIEPQARG+LPLDA+++P+RL RT+RQ + + IDTDFDGVI GCAAPRPGRR+TWIN +IR LYR+L + G+CHTVE +G LVGGLYGVALGG +FGESMFS RDASK+ L++LC+RLI+GGF LLDTQFVTDHL QFGT+E+D+SEF +L +A+ + DF RL +DV+ VL+I+
Sbjct: 1 MTARESPLLEITPQVLLKAYTCGIFPMAESADDPQLYWIEPQARGVLPLDAVRVPKRLQRTIRQQPYVIRIDTDFDGVIAGCAAPRPGRRTTWINDRIRKLYRELHQLGYCHTVEAWHQGRLVGGLYGVALGGAFFGESMFSEMRDASKITLIYLCARLIYGGFVLLDTQFVTDHLRQFGTIEVDRSEFHRQLDEALTIQGDFFRLERDVTPERVLEIM 219
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A1I7NJG3_9HYPH (Leucyl/phenylalanyl-tRNA--protein transferase n=5 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7NJG3_9HYPH) HSP 1 Score: 317 bits (813), Expect = 4.640e-107 Identity = 158/222 (71.17%), Postives = 181/222 (81.53%), Query Frame = 1
Query: 1 TMAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRS 666
+MA+R+ PMFEITPQ+LL+AY+CGIFPMAESADDP LYWIEPQ RG+LPLD + IPRRL RTVR F VT+DTD++ VIDGCAAPR GR STWIN++IRSLYR+LF G CHTVEV G LVGGLYGVAL +FGESMFSTERDASKV LVHL +RLI GGFTLLDTQFVTDHL QFGT+E+D+S FQ +L+ A+E ADF L D SGA+V I S
Sbjct: 14 SMASRDDPMFEITPQVLLKAYSCGIFPMAESADDPALYWIEPQQRGVLPLDGLHIPRRLLRTVRTTPFRVTVDTDYERVIDGCAAPRAGRMSTWINTRIRSLYRELFDIGACHTVEVWNGGELVGGLYGVALKSAFFGESMFSTERDASKVALVHLAARLIKGGFTLLDTQFVTDHLRQFGTIELDRSAFQRQLEKALEKNADFYALRPDASGAEVAAIFSS 235
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: UPI00035C74BD (leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00035C74BD) HSP 1 Score: 315 bits (808), Expect = 1.890e-106 Identity = 155/223 (69.51%), Postives = 179/223 (80.27%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRSAQ 672
MA+R+ M EITPQ+LL+AY+CGIFPMAESADDP LYWIEPQ RGILPL+A+ +P+RLARTVR V IDTD++GVI+GCAA R GRRSTWIN +IR LY++LFR GHCHTVEV LVGGLYGVALGGV+FGESMFS RDASK+ LVHL RLI GGFTLLDTQFVTDHL QFGT+E+D+ +F L DA+ ADF RLP D GA +LDII A+
Sbjct: 1 MASRDDIMIEITPQVLLKAYSCGIFPMAESADDPALYWIEPQHRGILPLEAVHVPKRLARTVRSGALRVAIDTDYEGVIEGCAAERAGRRSTWINGRIRGLYQELFRLGHCHTVEVWEGDRLVGGLYGVALGGVFFGESMFSYVRDASKIALVHLAGRLIAGGFTLLDTQFVTDHLRQFGTIEVDRDDFHRLLDDALRQSADFLRLPLDTPGATILDIIERAR 223
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A2W4TWS6_9PROT (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4TWS6_9PROT) HSP 1 Score: 313 bits (801), Expect = 1.790e-105 Identity = 147/223 (65.92%), Postives = 184/223 (82.51%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRSAQ 672
M AR++P+ EITPQ+LL+AY CGIFPMAESADDPQLYWIEPQARG+LPLD +++P+RL RT+RQ+R+ + IDTDF GVI GCAAP+PGRR+TWIN +IR LYR+L R G+CHTVEV LVGGLYGVALGG +FGESMFS RDASK+ L++LC+RLI+GGF LLDTQFVTDHL QFGT+E+D++EF +L+ A+++ DF RL + + VLDI+ Q
Sbjct: 1 MTARDTPLLEITPQVLLKAYTCGIFPMAESADDPQLYWIEPQARGVLPLDQVRVPKRLRRTIRQERYQIRIDTDFAGVIAGCAAPKPGRRTTWINDRIRKLYRELHRLGYCHTVEVWDGERLVGGLYGVALGGAFFGESMFSEVRDASKIALIYLCARLIYGGFVLLDTQFVTDHLRQFGTIEVDRAEFHRQLEAALKINGDFFRLEPEPTAERVLDIVLGNQ 223
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A3S0RB07_HYPSQ (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0RB07_HYPSQ) HSP 1 Score: 309 bits (792), Expect = 7.250e-104 Identity = 151/222 (68.02%), Postives = 179/222 (80.63%), Query Frame = 1
Query: 1 TMAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRS 666
+MA+R+ PMFEITPQ+LL+AY+CGIFPMAESADDP LYWIEPQ RG+LPLD + IP+RL RTVR F V IDTD++GVIDGCAAPR GR STWINS+IR+LYR+LF G CHTVEV +VGGLYGVAL +FGESMFSTERDASK+ LVHL +RLI GGFTLLDTQFVTDHL QFGT+E+D+ FQ L+ A++ ADF L + +GA+V +I S
Sbjct: 14 SMASRDDPMFEITPQVLLKAYSCGIFPMAESADDPALYWIEPQQRGVLPLDKLHIPKRLLRTVRTTPFEVKIDTDYEGVIDGCAAPRAGRMSTWINSRIRALYRELFELGACHTVEVWSGDEMVGGLYGVALKSAFFGESMFSTERDASKIALVHLAARLIRGGFTLLDTQFVTDHLRQFGTIELDRMAFQRELELALQRDADFYALSRTATGAEVAEIFSS 235
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A2D7FHN5_9HYPH (Leucyl/phenylalanyl-tRNA--protein transferase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FHN5_9HYPH) HSP 1 Score: 308 bits (788), Expect = 1.530e-103 Identity = 147/222 (66.22%), Postives = 179/222 (80.63%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEV-RLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDIIRS 666
MA R++ + EITP++LL+AY+CGIFPMAE+ADDPQL+WIEPQARG+LPLD++ IPRRLART+R+D F + +DTDFDGVI+GCAA RPGR STWIN +IRSLY DLFR GHCHT+E EG LVGGLYGV LG +FGESMFS ERDASK+ LV+L +RLIHGGF +LDTQFVTDHL QFG +EI +SEFQ RL A+ +F LP +L+I++S
Sbjct: 1 MATRDNTLLEITPEVLLKAYSCGIFPMAENADDPQLFWIEPQARGLLPLDSISIPRRLARTIRRDPFEIRVDTDFDGVIEGCAASRPGRTSTWINERIRSLYGDLFRMGHCHTIEAWSKEGRLVGGLYGVELGRAFFGESMFSLERDASKIALVYLSARLIHGGFAMLDTQFVTDHLRQFGAIEISQSEFQDRLDVALSCAGNFAALPLSSPPEQILEIVQS 222
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Match: A0A7C2M4I8_9HYPH (Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M4I8_9HYPH) HSP 1 Score: 306 bits (783), Expect = 9.780e-103 Identity = 149/219 (68.04%), Postives = 176/219 (80.37%), Query Frame = 1
Query: 4 MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDAMQIPRRLARTVRQDRFHVTIDTDFDGVIDGCAAPRPGRRSTWINSQIRSLYRDLFRQGHCHTVEVRLEGALVGGLYGVALGGVYFGESMFSTERDASKVGLVHLCSRLIHGGFTLLDTQFVTDHLSQFGTVEIDKSEFQSRLQDAVELFADFQRLPQDVSGADVLDII 660
MA+R+ + EITPQ+LL+AY CGIFPMAESADDP LYWIEPQ RGIL L + +PRRLARTVRQ RF + IDTDF+GVIDGCAA R GRR+TWIN +IR+LYRDLF G+CHTVE +G LVGGLYGVAL G +FGESMFS+ERDASKV L++LC+RLI GGF+LLDTQFVT+HL QFGT+EID++EF L+ A+ ADF LP D VL I+
Sbjct: 1 MASRDDIIIEITPQVLLKAYTCGIFPMAESADDPALYWIEPQQRGILDLSRVHVPRRLARTVRQGRFEIRIDTDFEGVIDGCAASRAGRRTTWINRKIRALYRDLFDAGYCHTVEALAQGRLVGGLYGVALNGAFFGESMFSSERDASKVALIYLCARLIAGGFSLLDTQFVTEHLRQFGTIEIDRAEFHRLLERALAHEADFHALPPDADAERVLAIV 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15578.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15578.1.1 >prot_P-wetherbeei_contig15578.1.1 ID=prot_P-wetherbeei_contig15578.1.1|Name=mRNA_P-wetherbeei_contig15578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp MAARNSPMFEITPQMLLRAYACGIFPMAESADDPQLYWIEPQARGILPLDback to top mRNA from alignment at P-wetherbeei_contig15578:732..1445- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15578.1.1 ID=mRNA_P-wetherbeei_contig15578.1.1|Name=mRNA_P-wetherbeei_contig15578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig15578:732..1445- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15578:732..1445- >mRNA_P-wetherbeei_contig15578.1.1 ID=mRNA_P-wetherbeei_contig15578.1.1|Name=mRNA_P-wetherbeei_contig15578.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig15578:732..1445- (Phaeothamnion wetherbeei SAG_119_79)back to top |