mRNA_P-wetherbeei_contig15574.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI) HSP 1 Score: 139 bits (351), Expect = 2.230e-34 Identity = 85/218 (38.99%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 1 GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAA-SEPDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAFLVGRWLVG-PAGGNHAATCSAPYSARSRAPETAFSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLAA 648
G+DC PG L + G WR++ + I CL AC GG+A S+ D YC GY+GP CA C SGYA G + CHEC V+A L G+L L A+L+ R+L+ P +C S+ E ++I +V QI+T +A +T + P A+ LG + V NLD+G +LS C++ +FY RL++ TL P+AL L L CTF+ A
Sbjct: 1079 GLDCDEPGVLQLTLPVASGYWRSSDDTTTIRKCLYEEACEGGSAISQSDDYCAVGYQGPYCAVCLSGYAGGISNGCHECTEAFRAWMYVLAVLGGLLALACAWLLFRYLIQEPVSPGRFLSCRNSRMV-SKVKELPLHKLKIPIVVFQILTQYADITTVDFPPAFTKLLGFMDVLNLDMGWVLSASCIFSPNFYGRLVLTTLVPIALGLALCCTFMYA 1295
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A836CFN7_9STRA (Beta_helix domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFN7_9STRA) HSP 1 Score: 135 bits (339), Expect = 8.400e-33 Identity = 84/227 (37.00%), Postives = 119/227 (52.42%), Query Frame = 1
Query: 4 IDCSNPGNSLSALALYPGRWRATSASLQ--IETCLSSRACPGGAASEPDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGV--LGLVAAFLVGRWLVGPAGGNHAATCSAPYSARSRAPE----------TAFSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFL 642
+DCS PG ++S L L PG WR + + Q + TC + AC GG A +PDGYC GYEGP CA C Y CHEC +G F +V +G++ +F + G A T Y + A +++RI ++ Q++T + ++TG LP Y F+ L N+DL +LLS+GC++ A+FYDRLLI TL PL +L LLG +L
Sbjct: 484 LDCSVPGTNVSTLPLNPGFWRGSMTAGQEVVLTCWNDAACKGGVAEDPDGYCNAGYEGPYCAVCAPNYTSVVAYKCHECRSGAVIVFVLVLXXXXXXXVGILVSFALSGGQRGSTSAEMAVTTREGYEVMGGTQKFLVSLGNIGVRALASLRIPIIVFQVLTQYFNITGVPLPQLYRDFIVWLDFINMDLSVLLSLGCVFPANFYDRLLISTLLPLGVLALLGVAYL 710
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 134 bits (336), Expect = 2.280e-32 Identity = 90/222 (40.54%), Postives = 124/222 (55.86%), Query Frame = 1
Query: 22 GNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEPDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAF-LVGRWL----VGP----AGGNHAATCSAPYSARSRAPETAFSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLAATWQN 660
G +L+ L + PG +R++ S I C +AC GG+A YC +GY GP CA C +GY+ G+ C C + + V AA G L L A LV R + VGP TCSA + AR R +A++I +V QIVT ++ + G E P AY FL V+ V NLDLG +LS C++D +FYDRLL+ T+ P+ +L LLGCT+L A +N
Sbjct: 585 GATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGT--YCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSA-WQARVR-QTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRN 802
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A835YLB8_9STRA (Pectin lyase fold/virulence factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB8_9STRA) HSP 1 Score: 132 bits (333), Expect = 5.230e-32 Identity = 85/241 (35.27%), Postives = 125/241 (51.87%), Query Frame = 1
Query: 4 IDCSNPGNSLSALALYPGRWRATS--ASLQIETCLSSRACPGGAAS-EPDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAFLVGRWLVGPAGGNHAATCSAPYSARSR----------------------APETAFSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLAAT 651
++C PG + + L L PG WRA+ I C + +AC GGAA D YC DGYEGP CA CR+GY G C++C +G +F V + L +V A +V + G + + S Y SR A + A+RI +V QI+T + S+TG +PA Y TF+ L + NLD+ ++LS GC++D +FY +LL+ T+ PL +L LLG ++ A+
Sbjct: 373 VECLEPGITTATLPLLPGYWRASLEVGQADILRCWNEKACRGGAAKLSTDDYCDDGYEGPYCAVCRAGYTSFVGSTCYKCQSGAVVSFAVFSTL-----VVVAMIVVCGALAAMGAHRPGSVSEVYKEGSRNTGVADATASVYLGLTSTNVKGAVMSVLRAMRIPIVVMQILTQYLSITGVPIPALYRTFISWLDLINLDMSVVLSPGCVFDVNFYQKLLLSTITPLCILALLGLAYVVAS 608
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 130 bits (327), Expect = 3.640e-31 Identity = 88/228 (38.60%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 22 GNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEPDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAF-LVGRWL----VGP---------AGGNHAATCSAPYSARSRAPETA-FSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLAATWQN 660
G +L+ L + PG +R++ S I C +AC GG+A YC +GY GP CA C +GY+ G+ C C + + V AA G+L L A LV R + VGP TCSA ++R +T +A++I +V QIVT ++ + G E P AY FL V+ V NLDLG +LS C++D +FYDRLL+ T+ P+ +L LLGCT++ A +N
Sbjct: 561 GATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGT--YCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSA---LQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRN 783
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.330e-30 Identity = 85/228 (37.28%), Postives = 122/228 (53.51%), Query Frame = 1
Query: 1 GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEPDGYCGDGYEGPLCAACRSGYARGFGDACHEC-GAGTATAFRVVAALAGVLGLVAAFLVGRWLVGPAGGNHAATCSAPYSARSRAPETA-------FSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLAATWQN 660
G + G +L+ L + PG +R+ + S I C AC GG YC GY GP CA C +G++RG+ +C C G AF VV+ + ++ L FL + LV + + + R R+ A +AI+I +V QIVT ++ + G E P AY FL V+ V NLDLG +LS+ C++D DFYDRLL+ T+ P +L LLGCT+L A +N
Sbjct: 442 GAQTTTRGGTLATLEILPGYYRSLATSTDIRECFFEDACEGGQVVGE--YCATGYSGPYCAVCTAGFSRGYFHSCKSCMGDSRRRAFYVVSTVGALVLLAVVFLAAK-LVSVVEMTPSRKAPSRWQ-RKRSVWRARIKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVIDVVNLDLGFILSLACVYDTDFYDRLLLTTICPAVVLGLLGCTYLVARRRN 665
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.690e-29 Identity = 83/222 (37.39%), Postives = 121/222 (54.50%), Query Frame = 1
Query: 1 GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEPDGYCGDGYEGPLCAACRSGYARGFGDACHEC-GAGTATAFRVVAALAGVLGLVAAFLVGRWLVGPAGGNHAATCSAPYSARSRAPETAF------SAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLGCTFLA 645
G ++ G +L+ L + PG +R+++ S I C AC GG YC GY GP CA C +G++ G+ +C C G AF VV+A+ GVL L+A + LV ++ + + + + +AI+I +V QIVT ++ + G E P AY FL V+ V NLDLG +LS+ C+ D DFYDRLL+ T+ P +L LLGCT+LA
Sbjct: 584 GAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGE--YCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAV-GVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLA 802
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.210e-28 Identity = 86/220 (39.09%), Postives = 113/220 (51.36%), Query Frame = 1
Query: 4 IDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASE-PDGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAFLVGRWLVGPAGGNHAATCSAPYSAR----------SRAPETAFSAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLLG 630
DCS G S AL L PG WR + C + AC GG+A++ PD YC +GY GP CA C + + R FG+ C C +G A A A++ + L+ A VG + A SA + A A S +RI +V Q++T FAS+TGA P Y FL L++F+LDL L LS GC DFYDRLL +T+APL + LG
Sbjct: 753 FDCSQIGVSAKALPLRPGLWRENLTQANVRQCWRAEACHGGSATDSPDDYCAEGYSGPYCAVCAADHTRTFGNKCVACDSGQAAA-----AISVFVILICAAAVGISYIAITSLRLDALIEVMDSATEDQTGLLASVAAALGLALSHLRIPIVVVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLSLFLSAGCYVRTDFYDRLLFVTIAPLVCVAALG 967
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A835YIY5_9STRA (PARP catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY5_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.770e-28 Identity = 90/218 (41.28%), Postives = 118/218 (54.13%), Query Frame = 1
Query: 1 GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEP-DGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAFLVGRWLVGPA-GGNHAATCSAPYSA----RSRAPETAF---SAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLL 627
G+ CS G ++ LAL G WR T I C +S AC GGAA+ D YC GY+GP CA C YA G C EC T TA V + ++ +VA FL W++ A GG H A+ + + RSR T +R+ ++ Q+VT + S+TGA LP AY FL +S+F LDL L S GC +FY RLLI TLAPLA++ L+
Sbjct: 1077 GLACSGVGVTIPMLALDQGYWRETLTQEVIRMCWNSAACGGGAAAASVDDYCTAGYKGPYCAVCSDNYAALVGYRCVEC---TDTAVAVAFVVIALVAVVAVFLA--WVLASAVGGTHTASEDSGGAKGTDIRSRVIRTVSVLARRLRVPVIVFQVVTQYVSITGAVLPPAYTRFLHGMSIFLLDLRWLTSPGCAMSVNFYGRLLIATLAPLAVVALI 1289
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.110e-26 Identity = 82/218 (37.61%), Postives = 116/218 (53.21%), Query Frame = 1
Query: 1 GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEP-DGYCGDGYEGPLCAACRSGYARGFGDACHECGAGTATAFRVVAALAGVLGLVAAFLVGRW-LVGPAGGNHAATCSAPY----SARSRAPETAF---SAIRIALVFAQIVTLFASLTGAELPAAYCTFLGVLSVFNLDLGLLLSMGCLWDADFYDRLLILTLAPLALLLLL 627
G+ C+ G +++ L L G WR T I C +S AC GGAA+ D YC GYEGP C C + YA G C EC T T+ + + + +V FL W LV G H AT + + SR T +R+ +V Q++T + S+TG +LP +Y FL +S+F+LDL L S GC + +FYDRLL+ TL+PLA++ L+
Sbjct: 198 GLACTGIGATIATLPLDSGYWRETLMQELIRKCWNSDACIGGAAAASVDDYCAAGYEGPYCTVCSADYAALVGYRCVEC---TTTSVAIALSAIAAIAIVVMFLA--WVLVRAVGEAHTATDGSDRVEATNTSSRVARTLLVLMRRLRVPIVVLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALI 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15574.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15574.1.1 >prot_P-wetherbeei_contig15574.1.1 ID=prot_P-wetherbeei_contig15574.1.1|Name=mRNA_P-wetherbeei_contig15574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp GIDCSNPGNSLSALALYPGRWRATSASLQIETCLSSRACPGGAASEPDGYback to top mRNA from alignment at P-wetherbeei_contig15574:704..1363- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15574.1.1 ID=mRNA_P-wetherbeei_contig15574.1.1|Name=mRNA_P-wetherbeei_contig15574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig15574:704..1363- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15574:704..1363- >mRNA_P-wetherbeei_contig15574.1.1 ID=mRNA_P-wetherbeei_contig15574.1.1|Name=mRNA_P-wetherbeei_contig15574.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig15574:704..1363- (Phaeothamnion wetherbeei SAG_119_79)back to top |