mRNA_P-wetherbeei_contig15526.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15526.1.1
Unique NamemRNA_P-wetherbeei_contig15526.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A448YZH3_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZH3_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.230e-75
Identity = 116/213 (54.46%), Postives = 160/213 (75.12%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTV-------DENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            M+  QLAQVE+LC+ LY  V       ++ +RQ AQ +L+SLQSS ++IPQCQYIL N+KS YA  +A NSLT L+TTHWNSFT  QR+++RNY+  YL NNGP L ++V+ +LI L+CRITKLGWFD+        PV  HR++ ++VT+FL ++++ CI+GL+I  Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F   L+T++Q++
Sbjct:    1 MEPAQLAQVEALCETLYTGVPTSGENGEQITRQDAQQRLMSLQSSADFIPQCQYILENTKSQYARLVATNSLTELITTHWNSFTIPQRIDIRNYVLTYLANNGPQLENFVVVSLIKLVCRITKLGWFDD--------PV--HRELADDVTKFLQATIEHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 203          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 5.010e-73
Identity = 124/206 (60.19%), Postives = 159/206 (77.18%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MDA QL QVE+LC+ LYN+ DE +R  AQNQLLSLQ+S E IPQCQYIL++S++AYAL LA++SLT L+++HWN+FT  QRVE+RNYI  YL + GPGL DYV T+LI LLCRITKLGWFD+            HR+VV+ V +FL ++ D  +IGL+I  Q+V E+N+PT+GRTLPQHRKTAVSFRD+ L  IF  +L +MQQ++
Sbjct:    1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQ----------RHREVVDAVMRFLQATNDHYVIGLKILNQLVEEINIPTTGRTLPQHRKTAVSFRDLCLLPIFQIALKSMQQIQ 196          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.910e-71
Identity = 125/207 (60.39%), Postives = 155/207 (74.88%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSS-SLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MDA QLAQVESLCDALYN  +E  R  AQ QL+SLQSS +YIPQCQYIL+NS++ YA  LA+NSLT L+T HWNSF+  QRV++RNYI  YL + GP L DYV+TAL+ LLCRITKLGWFD+            HR +V+E  +FL + S    IIGLRI  Q+V E+N+P++GRTLPQHRKTAVSFRD  L RIF+ +L+ +QQ++
Sbjct:    3 MDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDA----------AHRDLVDETLKFLGAPSTAHYIIGLRILNQLVEEINIPSNGRTLPQHRKTAVSFRDTCLLRIFNIALTALQQLK 199          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A4D9CV70_9STRA (Importin N-terminal domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV70_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.500e-71
Identity = 124/206 (60.19%), Postives = 157/206 (76.21%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MD   L Q+E LCDALYN+  E+ RQQAQ QLLSLQSS EYIPQCQYIL++S S+YAL +AAN+LT L+T +WN+F+ AQRVE+RNY+  YL N G  + D+V T+LI L+CRITKLGWFD+           +HR++VE+V +FL +++D CI+GLRI  Q+V E N+PTSGRTL  HRKTAVSFRD+ LF IF   LST+QQV+
Sbjct:    1 MDTQGLQQLELLCDALYNSSSESERQQAQQQLLSLQSSAEYIPQCQYILDHSHSSYALFVAANALTKLITQYWNNFSVAQRVEIRNYVLSYLANQGHQVPDFVTTSLIQLVCRITKLGWFDDP----------QHRELVEDVEKFLHANVDYCIVGLRILNQVVEEFNLPTSGRTLTLHRKTAVSFRDLCLFHIFQICLSTLQQVQ 196          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: K0RJV1_THAOC (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJV1_THAOC)

HSP 1 Score: 239 bits (611), Expect = 7.930e-70
Identity = 118/210 (56.19%), Postives = 159/210 (75.71%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MD  QLAQVESLC+ LY     N    SR++AQ++LLSLQS+  +IPQCQYIL+ SKS YAL +A+NSLT L+TTHWN+FT AQR+++RNY+  YL NNGP L D+V  +LI L+CRITKLGWFD+            HR++ E+VT+FL +++D CI+GL+I  Q+V ELN+ T+GRTL QHRKT+VSFRD+ LF++F   L+T++Q++
Sbjct:    1 MDEAQLAQVESLCETLYTGTSSNGESYSREEAQSRLLSLQSNASFIPQCQYILDRSKSQYALLVASNSLTELITTHWNNFTIAQRIDIRNYVLGYLANNGPTLQDFVTLSLIKLVCRITKLGWFDDP----------THRELTEDVTKFLQATVDHCILGLQILNQLVDELNIATTGRTLTQHRKTSVSFRDLCLFKVFQLGLTTLKQLQ 200          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: B7FRZ4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRZ4_PHATC)

HSP 1 Score: 239 bits (610), Expect = 9.980e-70
Identity = 118/212 (55.66%), Postives = 158/212 (74.53%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYNTVDEN------SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MDA QL QVE+LC+ LY  V  N      +R +AQ +LLSLQS+ EYIPQCQYIL+NSKS YA  +A+NSL  LVT HWNSFT  QR+++RNY+  YL NNGP L D+++ +LI L+CRITKLGWFD++           HR++ ++VT+FL +++D CI+GL+I  Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F   L+T++Q++
Sbjct:    1 MDAAQLVQVEALCETLYTGVAANFDSETVTRSEAQQRLLSLQSNAEYIPQCQYILDNSKSQYARLVASNSLIELVTIHWNSFTVPQRIDIRNYVLGYLANNGPSLQDFLVLSLIKLVCRITKLGWFDDS----------AHRELADDVTKFLQATVDHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 202          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: B8C1X0_THAPS (Importin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1X0_THAPS)

HSP 1 Score: 239 bits (609), Expect = 1.190e-69
Identity = 117/213 (54.93%), Postives = 162/213 (76.06%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALY-------NTVDENSRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MD  QLAQVE+LC+ LY       +  D  +R++AQ++LLSLQSS  +IPQCQYIL+ S+S YAL +A+NSLT L+TTHWN+FT AQR+++RNY+  YL NNGP L D+V  +LI L+CRITKLGWFD++           HR++ E+VT+FL +++D CI+GL++  Q+V ELN+PT+GRTL QHRKT+VSFRD+ LF++F   L+T+QQ++
Sbjct:    1 MDDSQLAQVEALCETLYTGQSVASSNSDPITREEAQSRLLSLQSSANFIPQCQYILDRSQSQYALLVASNSLTELITTHWNNFTIAQRIDIRNYVLGYLANNGPTLQDFVTLSLIKLVCRITKLGWFDDS----------THRELTEDVTKFLQATIDHCILGLKLLNQLVDELNIPTTGRTLTQHRKTSVSFRDLCLFKVFQLGLTTLQQLQ 203          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A7S1Z0P3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z0P3_TRICV)

HSP 1 Score: 218 bits (555), Expect = 3.060e-68
Identity = 102/183 (55.74%), Postives = 143/183 (78.14%), Query Frame = 1
Query:   70 SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            SR +AQ++LLSLQSS +YIPQCQYIL++S+S YA  +A+NSLT L+TTHWN+FT  QR+++RNY+  YL N GP L D+V+ +L+ L+CRITKLGWFD+            HR++ ++VT+FL +++D  I+GL+I  Q+V ELN+PTSGRTL QHRKT+VSFRDV LF++F   L+T++Q++
Sbjct:    2 SRAEAQSRLLSLQSSADYIPQCQYILDHSQSHYARLVASNSLTELITTHWNNFTVPQRIDIRNYVLSYLANQGPALQDFVVVSLVKLVCRITKLGWFDDP----------THRELADDVTKFLQATVDHAILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLFKVFQLGLTTLKQLQ 174          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A7S2L6Z5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L6Z5_9STRA)

HSP 1 Score: 229 bits (584), Expect = 4.480e-66
Identity = 117/211 (55.45%), Postives = 156/211 (73.93%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALY--NTVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQV 615
            MDA QL+QVE LCD LY  +  +E     SRQ+AQN+L++LQSS +YIPQCQYIL+ S++ YA  +AANSLT L+T+HWN+FT  QR+++RNYI  YL N GP L +YV  +LI L+CRITKLGWFD+            HR++ E+V +FL +++D CI+GL+I  Q+V ELN+PT+GRTL QHRKT+VSFRD  L RIF   L+T++Q+
Sbjct:    1 MDAQQLSQVERLCDTLYVGSPYEEGGVAISRQEAQNRLMALQSSADYIPQCQYILDQSQNQYARLVAANSLTELLTSHWNNFTVPQRIDIRNYILGYLANKGPNLENYVAISLIKLVCRITKLGWFDDK----------THRELSEDVQKFLQATVDHCILGLKILNQLVDELNIPTTGRTLTQHRKTSVSFRDTCLLRIFQLGLTTLKQL 201          
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Match: A0A1E7FRK9_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRK9_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.500e-65
Identity = 114/213 (53.52%), Postives = 157/213 (73.71%), Query Frame = 1
Query:    1 MDAVQLAQVESLCDALYN---TVDEN----SRQQAQNQLLSLQSSPEYIPQCQYILNNSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLADYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSLDRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLSTMQQVR 618
            MD+ QL QVE+LC+ LY    T  EN    +RQ+AQ +L+SLQ S ++IPQCQYIL  ++S YA  +A NSLT L+TTHWNSFT  QR+++RNY+  YL NNG  L  +V+ +LI L+CRITKLGWFD+        PV  HR++ ++VT+FL ++++ CI+GL+I  Q+V ELN+PTSGRTL QHRKT+VSFRDV L ++F   L+T++Q++
Sbjct:    1 MDSAQLKQVEALCETLYTGMPTTGENGEQINRQEAQQRLMSLQQSADFIPQCQYILEKTQSQYARLVATNSLTELITTHWNSFTIPQRIDIRNYVLTYLANNGTQLESFVVVSLIKLVCRITKLGWFDD--------PV--HRELADDVTKFLQATVEHCILGLKILNQLVDELNIPTSGRTLTQHRKTSVSFRDVCLLKVFQLGLTTLKQLQ 203          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15526.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A448YZH3_9STRA2.230e-7554.46Importin N-terminal domain-containing protein n=1 ... [more]
A0A6H5L6F7_9PHAE5.010e-7360.19Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YUW2_9STRA1.910e-7160.39RAN binding protein 16-like protein n=1 Tax=Tribon... [more]
A0A4D9CV70_9STRA2.500e-7160.19Importin N-terminal domain-containing protein n=3 ... [more]
K0RJV1_THAOC7.930e-7056.19Importin N-terminal domain-containing protein n=1 ... [more]
B7FRZ4_PHATC9.980e-7055.66Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8C1X0_THAPS1.190e-6954.93Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S1Z0P3_TRICV3.060e-6855.74Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2L6Z5_9STRA4.480e-6655.45Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A1E7FRK9_9STRA2.500e-6553.52Importin N-terminal domain-containing protein n=2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15526contigP-wetherbeei_contig15526:3..620 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G3N6
Preferred nameXPO7
PFAMsIBN_N
Model size618
Max annot lvl2759|Eukaryota
KEGG koko:K18460
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005049,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008536,GO:0012505,GO:0015031,GO:0015833,GO:0017016,GO:0017038,GO:0017076,GO:0019001,GO:0019899,GO:0031267,GO:0031967,GO:0031975,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0051020,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072594,GO:0097159,GO:0097367,GO:0140104,GO:0140142,GO:1901265,GO:1901363
Exons1
Evalue6.33e-74
EggNOG OGsKOG1410@1|root,KOG1410@2759|Eukaryota
Ec32 ortholog descriptionRAN binding protein 16-like, protein transporter
Ec32 orthologEc-00_006640.1
Descriptionnuclear export signal receptor activity
Cds size618
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186058.9263287-CDS-P-wetherbeei_contig15526:2..6201683186058.9263287-CDS-P-wetherbeei_contig15526:2..620Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15526 3..620 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15526.1.1prot_P-wetherbeei_contig15526.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15526 3..620 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15526.1.1

>prot_P-wetherbeei_contig15526.1.1 ID=prot_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp
MDAVQLAQVESLCDALYNTVDENSRQQAQNQLLSLQSSPEYIPQCQYILN
NSKSAYALNLAANSLTHLVTTHWNSFTPAQRVELRNYINQYLWNNGPGLA
DYVITALITLLCRITKLGWFDETPPPGPDGPVYEHRKVVEEVTQFLSSSL
DRCIIGLRITCQMVSELNVPTSGRTLPQHRKTAVSFRDVALFRIFHFSLS
TMQQVR
back to top

mRNA from alignment at P-wetherbeei_contig15526:3..620-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15526.1.1 ID=mRNA_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig15526:3..620- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGCCGTGCAGCTGGCGCAGGTGGAGTCGCTCTGCGACGCGCTGTA CAACACGGTGGACGAGAACTCGCGGCAGCAGGCCCAGAACCAGCTGCTGA GCCTGCAGAGCTCGCCCGAGTACATTCCGCAGTGCCAGTACATCCTCAAC AACAGCAAGAGCGCCTACGCGCTCAACCTGGCGGCCAACAGCCTCACCCA TCTGGTGACAACTCACTGGAACTCCTTCACGCCGGCGCAACGCGTCGAGC TGCGGAACTACATCAACCAGTATCTGTGGAACAACGGCCCCGGCCTGGCC GACTATGTCATTACGGCGCTCATCACGCTGCTCTGCCGCATCACCAAGCT GGGGTGGTTCGACGAGACGCCGCCGCCGGGCCCCGACGGCCCAGTCTACG AGCACCGAAAGGTCGTGGAAGAGGTGACGCAGTTTCTGAGCTCATCGCTG GACCGGTGCATCATCGGGCTGCGCATCACGTGCCAGATGGTGTCGGAGCT CAACGTGCCGACGTCCGGGCGGACACTGCCGCAGCACCGTAAGACGGCCG TCAGCTTCCGGGACGTGGCGCTCTTCCGGATCTTTCACTTCTCCCTCTCG ACGATGCAGCAGGTACGT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15526:3..620-

>mRNA_P-wetherbeei_contig15526.1.1 ID=mRNA_P-wetherbeei_contig15526.1.1|Name=mRNA_P-wetherbeei_contig15526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig15526:3..620- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGCCGTGCAGCTGGCGCAGGTGGAGTCGCTCTGCGACGCGCTGTA
CAACACGGTGGACGAGAACTCGCGGCAGCAGGCCCAGAACCAGCTGCTGA
GCCTGCAGAGCTCGCCCGAGTACATTCCGCAGTGCCAGTACATCCTCAAC
AACAGCAAGAGCGCCTACGCGCTCAACCTGGCGGCCAACAGCCTCACCCA
TCTGGTGACAACTCACTGGAACTCCTTCACGCCGGCGCAACGCGTCGAGC
TGCGGAACTACATCAACCAGTATCTGTGGAACAACGGCCCCGGCCTGGCC
GACTATGTCATTACGGCGCTCATCACGCTGCTCTGCCGCATCACCAAGCT
GGGGTGGTTCGACGAGACGCCGCCGCCGGGCCCCGACGGCCCAGTCTACG
AGCACCGAAAGGTCGTGGAAGAGGTGACGCAGTTTCTGAGCTCATCGCTG
GACCGGTGCATCATCGGGCTGCGCATCACGTGCCAGATGGTGTCGGAGCT
CAACGTGCCGACGTCCGGGCGGACACTGCCGCAGCACCGTAAGACGGCCG
TCAGCTTCCGGGACGTGGCGCTCTTCCGGATCTTTCACTTCTCCCTCTCG
ACGATGCAGCAGGTACGT
back to top