mRNA_P-wetherbeei_contig1550.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: A0A6H5L2J2_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J2_9PHAE) HSP 1 Score: 211 bits (537), Expect = 8.290e-61 Identity = 123/221 (55.66%), Postives = 140/221 (63.35%), Query Frame = 1
Query: 34 LSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKSVRPLST-------------GQPYALPPTQAARV-PVRGEPLEVFRELVGRVPTQALKKAL 654
+SREL ++VPAR+ENAYQ+D NLAL LRTLEG WL +SWH AR H G PREKEQ +YTFSQ LR+ + LN+++V LA ERVV LDLAPR+ T RLYVEIMASRSNV+L VD+ S ET+ ACAYQVSP+KSVRPLST GQ Y LPP AR P EP E F E VGRVPTQ LKKAL
Sbjct: 1 MSRELEQSIVPARVENAYQMDAHNLALQLRTLEGNIWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIRGLNIISVGLARPMERVVRLDLAPRLDTPATFRLYVEIMASRSNVVLVAVDEA----------------SGSETIAACAYQVSPSKSVRPLSTERLADLSVLPPLAGQAYVLPPAMTARRRPRPEEPFEDFVEAVGRVPTQQLKKAL 205
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: D8LSX7_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX7_ECTSI) HSP 1 Score: 190 bits (483), Expect = 4.070e-53 Identity = 109/191 (57.07%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 85 YQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKSVRPLSTGQPYALPPTQAARV-PVRGEPLEVFRELVGRVPTQALKKAL 654
+++D N+AL LRTLEG WL +SWH AR H G PREKEQ +YTFSQ LR+ LN+++V LA ERVV LDLAPR+ T RLYVEIMASRSNV+L VD+ S ET+ ACAYQVSP+KSVRPLSTGQ Y LPP AR P EP E F E VGRVPTQ LKKAL
Sbjct: 29 HEMDAHNVALQLRTLEGNMWLHVSWHPKGARCHVGGDVPREKEQKAYTFSQTLRSQIWGLNIVSVGLARPMERVVRLDLAPRLDTPSTFRLYVEIMASRSNVVLVAVDEA----------------SGSETIAACAYQVSPSKSVRPLSTGQAYELPPAMTARRRPRPEEPFEDFVEAVGRVPTQQLKKAL 203
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: A0A835YY55_9STRA (Fibronectin-binding protein A N-terminus-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY55_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.470e-42 Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHR 354
Q+VDFTTALL++RELA +VPAR+ENA+Q+D NLA+GLR +EG WL ISWH AR H G PP+ KEQ SY+FSQQLR + K L +++V LA FERVV A R+TDAPTH+
Sbjct: 2 QSVDFTTALLMTRELANAIVPARVENAFQIDAFNLAIGLRMVEGSEWLNISWHPQGARCHIGPAPPKGKEQQSYSFSQQLRTLLKGLTLVSVALAAPFERVVAFSFAQRLTDAPTHK 118
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: UPI00168A332C (NFACT family protein n=2 Tax=Alkalinema sp. FACHB-956 TaxID=2692768 RepID=UPI00168A332C) HSP 1 Score: 144 bits (363), Expect = 1.500e-36 Identity = 88/210 (41.90%), Postives = 118/210 (56.19%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVP 630
Q VDFTT + + EL T +PAR+E YQ D L+L LRTL+G +WL ISWH AAR+H G+PPPR+ + ++TFSQQL L ++A+ L FERV+VL A R D ++YVEIM SNVIL QE V A AYQVS +S +R + TG PY LPP + VP +P + +++ + +P
Sbjct: 2 QPVDFTTLMAICHELRQTWLPARLEQVYQRDRYTLSLALRTLQGRSWLTISWHPQAARLHIGDPPPRQPD--TFTFSQQLWHQLGGLALVAIDLVAPFERVLVLQFAKRPGDPILWQVYVEIMGQYSNVILVN--------------------QAQEIVTA-AYQVSDRQSRIRSIQTGDPYELPPRPTSAVPTLEDPYDRWQDRIQLIP 188
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: UPI0019D98A23 (NFACT family protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019D98A23) HSP 1 Score: 137 bits (345), Expect = 4.970e-34 Identity = 85/218 (38.99%), Postives = 114/218 (52.29%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVPTQALKKAL 654
Q VD+TT + EL +PAR E YQ D +AL LRTL+ WL I WHA AARI G+PPPR + ++TFS QLR L ++A+ + +ERV+ L R + P LYVEIM SNVILT + +V A+QVSP++S VRP+ TGQPY LPP +P E ++E V +P + ++ L
Sbjct: 2 QPVDYTTLIAACAELRRDWIPARTEQVYQRDRYTIALALRTLKKREWLTICWHAQAARICLGDPPPRTPD--TFTFSDQLRHQLNGLALIAIEIVAPWERVLDLQFGQRPGEEPLWHLYVEIMGKYSNVILTDAN---------------------RQIVTAAHQVSPSQSSVRPIQTGQPYELPPPLLGTLPKLDESFTSWQERVSLIPGKLKRQLL 196
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: UPI0018EF4DE8 (fibronectin-binding domain-containing protein n=4 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI0018EF4DE8) HSP 1 Score: 136 bits (342), Expect = 1.330e-33 Identity = 87/219 (39.73%), Postives = 116/219 (52.97%), Query Frame = 1
Query: 1 VQAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVPTQALKKAL 654
VQ DFTT EL +PAR+E YQ D +AL LRT++ W+ ISWH AAR+ AG+PPPR + ++TFSQQLR L ++A+ +ERV+ L A R D LYVEIM RSNVIL D+ +V A+QVS +S VRP+ TGQPY +PP P + EP E ++E + +P Q ++ L
Sbjct: 7 VQPADFTTLTAACSELRHGWLPARLEQVYQRDRHTVALSLRTIDRRGWVDISWHPQAARLCAGDPPPRTPD--TFTFSQQLRHQLGGLALVAITEVAPWERVLDLQFARRPGDPILWHLYVEIMGKRSNVILANQDN---------------------LIVTAAHQVSDRQSSVRPIQTGQPYEMPPALTDPAPSKNEPQERWQERITLIPGQLGRQML 202
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: Q8DHA1_THEVB (Rqc2 homolog RqcH n=7 Tax=Cyanobacteria TaxID=1117 RepID=Q8DHA1_THEVB) HSP 1 Score: 131 bits (329), Expect = 8.570e-32 Identity = 88/218 (40.37%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVPTQALKKAL 654
Q VD TT + +L + PAR+E YQ D +AL +RTL+ AWL +SWH AARI PPPR+ + ++TFSQQL A L ++ V L +ERVVVL+ APR +A RLY EIM SNVIL N+ G +V A+QVSP +S +RP+ TGQPY PP A +P P E +++ V +P + ++ L
Sbjct: 2 QPVDLTTLRAVCADLQHWL-PARLETVYQRDRHTIALAVRTLKKQAWLTLSWHPQAARIALEPPPPRQPD--TFTFSQQLHAQLNRLALVRVGLINPWERVVVLEFAPRPQEATQWRLYAEIMGKYSNVILV----------NAAG-----------EIVTAAHQVSPQQSRLRPILTGQPYVPPPPLTAALPSGEIPFEQWQQQVSVIPGRLRQQLL 195
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: A0A8J7YZY4_9CYAN (Rqc2 homolog RqcH n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J7YZY4_9CYAN) HSP 1 Score: 131 bits (329), Expect = 8.620e-32 Identity = 83/210 (39.52%), Postives = 110/210 (52.38%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVP 630
Q VDFTT L EL A +P+R+E YQ D L L LRT++ WL ISWH AAR+H G+PPPR+ + ++TFSQQ+R +L ++A+ +ER + L A R DA LYVE+M SN IL D +V A+QVS ++S VRP+ TGQ Y LPP+ P E +RE + VP
Sbjct: 2 QPVDFTTLSALRWELQAEWLPSRLEQVYQRDRFTLCLALRTIQKRGWLTISWHPQAARLHIGDPPPRDPD--TFTFSQQVRHQVGNLALVAIAPVAPWERALDLQFARRPGDAVLWHLYVEVMGKYSNAILVNKD---------------------HQIVTAAHQVSAHQSSVRPIQTGQIYTLPPSLTEPAPTLDESQARWRERISLVP 188
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: B0JJ07_MICAN (Rqc2 homolog RqcH n=79 Tax=Chroococcales TaxID=1118 RepID=B0JJ07_MICAN) HSP 1 Score: 129 bits (325), Expect = 2.790e-31 Identity = 82/210 (39.05%), Postives = 109/210 (51.90%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVP 630
Q+VDFTT E+AAT +PAR+E YQ+D Q +AL LRT + WL ISWH AR+H G+PPP+ + ++TFS QLR L + + +ERV+ L A R D LY+EIM SNVILT D+ +V A+QV+ +S VR + TGQ Y LPP A P E L ++ V +P
Sbjct: 2 QSVDFTTLSATCAEIAATWLPARLEQVYQIDRQTIALYLRTFDRKGWLIISWHPQGARLHIGDPPPKVPD--TFTFSDQLRHQLNGLALTKLAFVAPWERVIDLQFAQRPDDPALGHLYIEIMGKYSNVILTAADNQ---------------------IVTVAHQVNATQSSVRTVQTGQIYQLPPVLLATNPSLEESLSSWQARVSLIP 188
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Match: L8MXW8_9CYAN (Rqc2 homolog RqcH n=1 Tax=Pseudanabaena biceps PCC 7429 TaxID=927668 RepID=L8MXW8_9CYAN) HSP 1 Score: 117 bits (293), Expect = 8.170e-27 Identity = 74/212 (34.91%), Postives = 105/212 (49.53%), Query Frame = 1
Query: 4 QAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAISWHAGAARIHAGEPPPREKEQMSYTFSQQLRAVAKSLNVLAVRLAGSFERVVVLDLAPRITDAPTHRLYVEIMASRSNVILTQVDDPGSGTFNSGGISSSTGGSCQETVVACAYQVSPNKS-VRPLSTGQPYALPPTQAARVPVRGEPLEVFRELVGRVPTQ 636
Q D T + L+ EL VPAR+E YQ D + L LRTLE WL +SWH +AR+H PPP++ + ++TFSQQ+ +++V+L +ERVV L A R D LY+E+M SN IL +V A+QVS +S VRP+ TG YALPP +P E + +R+ + +P +
Sbjct: 2 QPADLTALVALTHELDLACVPARLEQVYQSDRHTIHLQLRTLEKKQWLLLSWHPQSARLHLCTPPPKQPD--TFTFSQQILHQVAGFALVSVKLTSPWERVVDLQFAKRPDDEVQWHLYLEVMGKYSNAILVNAHGE---------------------IVTAAHQVSSKQSRVRPIQTGDRYALPPALLEAIPNLDESFDSWRDRLILIPKE 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1550.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1550.4.1 >prot_P-wetherbeei_contig1550.4.1 ID=prot_P-wetherbeei_contig1550.4.1|Name=mRNA_P-wetherbeei_contig1550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp VQAVDFTTALLLSRELAATVVPARIENAYQLDGQNLALGLRTLEGGAWLAback to top mRNA from alignment at P-wetherbeei_contig1550:6072..7001+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1550.4.1 ID=mRNA_P-wetherbeei_contig1550.4.1|Name=mRNA_P-wetherbeei_contig1550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=930bp|location=Sequence derived from alignment at P-wetherbeei_contig1550:6072..7001+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1550:6072..7001+ >mRNA_P-wetherbeei_contig1550.4.1 ID=mRNA_P-wetherbeei_contig1550.4.1|Name=mRNA_P-wetherbeei_contig1550.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig1550:6072..7001+ (Phaeothamnion wetherbeei SAG_119_79)back to top |