mRNA_P-wetherbeei_contig155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig155.1.1
Unique NamemRNA_P-wetherbeei_contig155.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: D8LAV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV0_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 4.160e-53
Identity = 75/118 (63.56%), Postives = 97/118 (82.20%), Query Frame = 1
Query:    1 MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGG 354
            M+  ++G+LNQYWYS+ATI+A+VAEV E G+GGTAFLSTPS+YFSL  + R+ CK FD+D KWA+DPGFV YD+ +P+DIPETLR  FDMVV+DPPF+T +VW  Y  A ++LL+ GG
Sbjct:   13 MKNPENGDLNQYWYSKATIDAIVAEVGEFGSGGTAFLSTPSIYFSLDRDLRAKCKVFDLDTKWAKDPGFVLYDYTKPQDIPETLRGTFDMVVVDPPFVTRQVWESYTAATKLLLRPGG 130          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A835YKM7_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM7_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.740e-46
Identity = 74/120 (61.67%), Postives = 88/120 (73.33%), Query Frame = 1
Query:    1 MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYA--TAARMLLKSGG 354
            +R  + G+LNQYWYS+ TIEA+V EVVE G  GTAFLSTPS+YFS P   R  CK FDID  W +DPGFV++DFN+ +D+P  L   F MVVIDPPFI  EVW  YA  TAAR+LL+ GG
Sbjct:    9 VRNPEKGDLNQYWYSKGTIEALVLEVVEFGGEGTAFLSTPSIYFSTPAEIRQKCKVFDIDTAWKKDPGFVYFDFNKLDDVPADLHGTFAMVVIDPPFIMREVWEAYAMATAARLLLQPGG 128          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A7S1G4D1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4D1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 6.220e-41
Identity = 67/119 (56.30%), Postives = 82/119 (68.91%), Query Frame = 1
Query:    1 MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGGG 357
            +R  +  +LNQYWYS  +I AM AEVV  G G   F+STPS+YFSL +  R     FD+D +W +DPGFV YDFN PE+ PE LR AFDM+V+DPPFIT EVW +YAT  R+L K   G
Sbjct:   14 LRTKEKEDLNQYWYSAKSIAAMAAEVVATG-GKACFISTPSIYFSLTKEQREGNYVFDLDTQWEKDPGFVRYDFNEPENFPEELRHAFDMIVVDPPFITREVWEKYATTMRLLAKERSG 131          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A6T7IIE5_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T7IIE5_BIGNA)

HSP 1 Score: 139 bits (350), Expect = 1.770e-39
Identity = 70/120 (58.33%), Postives = 91/120 (75.83%), Query Frame = 1
Query:    1 MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENT--RSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGG 354
            +R  +DG+LNQYWYS  TI+AMV EV+E+ A   AFLSTPSVYFSLP+ +  R+  K FD+D ++ +DPGFV YDFN+P++IP+ +   FD VVIDPPFITEEV   YA AA++LL+  G
Sbjct:   14 LRTKEDGDLNQYWYSLNTIDAMVKEVMEN-AKVCAFLSTPSVYFSLPKKSELRTNSKVFDLDKRFKKDPGFVEYDFNKPDEIPKEIHGKFDYVVIDPPFITEEVLTLYAKAAKLLLQEEG 132          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A7S1RVF2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RVF2_ALECA)

HSP 1 Score: 140 bits (354), Expect = 4.620e-39
Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 1
Query:   10 SQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGG 354
            ++ G+LNQYW+SR TI A VAE+V+ G G  A +S+PSVYFSLP++ R  CK  D D +WA DPG+V YDFN PE +P     +FD V++DPPFIT EVW +YA   ++LL+ GG
Sbjct:   27 TERGDLNQYWFSRDTISAFVAEIVDAG-GNAALVSSPSVYFSLPDSIRVTCKVLDYDQQWASDPGYVFYDFNDPEALPVQCHGSFDFVLVDPPFITREVWAKYAMTVKLLLRDGG 140          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A250WRC4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRC4_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 9.810e-39
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 1
Query:    1 MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENT--RSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGG 354
            ++ S++  LNQYWYS ATIEA+V E++   A   AFLSTPSVYFSLP+++  + +   FD D++W  DP F  YDFN+PED+P  L + FDMVVIDPPFIT EVW +Y  AA++LLK+ G
Sbjct:   11 IKTSENELLNQYWYSAATIEALVQEILS-SASRVAFLSTPSVYFSLPKDSEVKKSSWVFDFDEQWRTDPHFCKYDFNKPEDLPGNLLNDFDMVVIDPPFITREVWEKYTKAAKLLLKNEG 129          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A7R9YZ19_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YZ19_9CHLO)

HSP 1 Score: 135 bits (341), Expect = 4.310e-38
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1
Query:    4 RASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENT--RSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGG 354
            R ++DG+LNQYWYS  TI+  +AE V   A   AFLSTPSVYFSLP ++  + A   FD+DD+W++D  +  YDFN+P+DIP+ L   FD VVIDPPFIT EVW +YA AA++LL   G
Sbjct:   14 RTAEDGDLNQYWYSSHTIKK-IAEEVAASATKAAFLSTPSVYFSLPADSPIKQASWVFDLDDQWSQDSNYFKYDFNKPDDIPKELHHVFDCVVIDPPFITREVWEKYAAAAKLLLSDSG 131          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A8J8NP72_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP72_HALGN)

HSP 1 Score: 134 bits (338), Expect = 1.060e-37
Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 1
Query:   13 QDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLP-ENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGGG 357
            +  + NQYWYS+ATI  M +E  + G    AFLSTPS+YFSL  +  ++A + FD D K+ +DPGFV YDFN+PEDIP  L + FDMVVIDPPFIT EVW +YATAA+++L   GG
Sbjct:   13 EKSDFNQYWYSKATINFMASECEQFGQK-IAFLSTPSIYFSLKNKEIKAASRVFDFDTKFNKDPGFVFYDFNKPEDIPADLHNYFDMVVIDPPFITREVWEKYATAAKLILIKEGG 127          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A0G4I283_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I283_9ALVE)

HSP 1 Score: 135 bits (339), Expect = 1.740e-37
Identity = 71/134 (52.99%), Postives = 85/134 (63.43%), Query Frame = 1
Query:   13 QDGNLNQYWYSRATIEAMVAEVVEH------------------GAGGTAFLSTPSVYFSLPE-NTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSGGG 357
            ++G+LNQYWYS  T+ A+V EV                     G   TAFLSTPS+YFSL     +   K FDID +WA  PGFV +DF +PE IP+  R A+DMVVIDPPFITEEVW +YATAA MLL+ GGG
Sbjct:   21 ENGDLNQYWYSPPTVSALVQEVEAQQTQTCGTWNGETANPEFGGMRRTAFLSTPSLYFSLTRAEVQGNSKFFDIDSQWAGHPGFVQFDFRKPEAIPQEERGAYDMVVIDPPFITEEVWSQYATAASMLLRQGGG 154          
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Match: A0A812SYR4_SYMPI (Eef1akmt1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SYR4_SYMPI)

HSP 1 Score: 138 bits (347), Expect = 2.150e-37
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 1
Query:   22 NLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENTRSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITEEVWREYATAARMLLKSG 351
            +LNQYW+S AT+   V E+ +  +G  A +S+PSVYFSLPE  R +CK FD D +W  DPGFV YDFNRPED+PE LR AF  V+IDPPFIT EVW +YA  AR L   G
Sbjct:   16 DLNQYWFSAATVSTFVEEIRDV-SGPAALVSSPSVYFSLPEERRRSCKVFDFDRQWDTDPGFVFYDFNRPEDLPEDLRGAFHFVLIDPPFITREVWEKYAITARFLAWEG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAV0_ECTSI4.160e-5363.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YKM7_9STRA2.740e-4661.67Putative N6-adenine methyltransferase-domain-conta... [more]
A0A7S1G4D1_9STRA6.220e-4156.30Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6T7IIE5_BIGNA1.770e-3958.33Hypothetical protein n=1 Tax=Bigelowiella natans T... [more]
A0A7S1RVF2_ALECA4.620e-3954.78Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A250WRC4_9CHLO9.810e-3955.83Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7R9YZ19_9CHLO4.310e-3855.46Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A8J8NP72_HALGN1.060e-3756.90Uncharacterized protein n=2 Tax=Halteria grandinel... [more]
A0A0G4I283_9ALVE1.740e-3752.99Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A812SYR4_SYMPI2.150e-3759.09Eef1akmt1 protein n=1 Tax=Symbiodinium pilosum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig155contigP-wetherbeei_contig155:243..786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LAV0
Preferred nameEFM5
PFAMsN6-adenineMlase
Model size357
Max annot lvl2759|Eukaryota
KEGG koko:K03953,ko:K12382,ko:K16546
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04142,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04142,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Exons2
Evalue6.81e-54
EggNOG OGsKOG3350@1|root,KOG3350@2759|Eukaryota
Descriptionmethyltransferase activity
Cds size357
COG categoryJ
BRITEko00000,ko00001,ko00002,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186058.0961392-CDS-P-wetherbeei_contig155:242..4251683186058.0961392-CDS-P-wetherbeei_contig155:242..425Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig155 243..425 -
1683186058.1054356-CDS-P-wetherbeei_contig155:612..7861683186058.1054356-CDS-P-wetherbeei_contig155:612..786Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig155 613..786 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig155.1.1prot_P-wetherbeei_contig155.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig155 243..786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig155.1.1

>prot_P-wetherbeei_contig155.1.1 ID=prot_P-wetherbeei_contig155.1.1|Name=mRNA_P-wetherbeei_contig155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MRASQDGNLNQYWYSRATIEAMVAEVVEHGAGGTAFLSTPSVYFSLPENT
RSACKCFDIDDKWARDPGFVHYDFNRPEDIPETLRSAFDMVVIDPPFITE
EVWREYATAARMLLKSGGG
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mRNA from alignment at P-wetherbeei_contig155:243..786-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig155.1.1 ID=mRNA_P-wetherbeei_contig155.1.1|Name=mRNA_P-wetherbeei_contig155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=544bp|location=Sequence derived from alignment at P-wetherbeei_contig155:243..786- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGCGTCACAGGACGGGAATCTAAACCAGTACTGGTATTCTCGGGC GACGATCGAAGCGATGGTCGCGGAAGTCGTAGAGCACGGCGCCGGCGGGA CGGCCTTCCTGTCGACGCCCAGCGTGTACTTCTCGTTGCCGGAGAACACG AGGTCGGCTTGCAAGTGCTTCGATGTGAGTGACATGTGTTCTTTCACTTC TTTCGGTGGAATATTCCTTTGTCCCTCCTTTCTAATAAGCCGACGTAATC TGGTTTAATACCTTCCTGCCAGCATCTGCTTTGGCAGCATCCAAAAACCG GTCGCAATCTGTAACAACCTGCGAACCAACAAATTCCAGCCAATAAAACA TCAAACCGTAGATCGACGACAAGTGGGCAAGGGATCCCGGATTCGTCCAT TACGATTTCAACCGCCCCGAAGACATCCCCGAAACTCTGCGCAGCGCCTT TGACATGGTGGTAATCGACCCGCCCTTCATCACCGAAGAGGTGTGGCGGG AATATGCTACTGCCGCACGCATGCTGCTGAAGTCCGGCGGCGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig155:243..786-

>mRNA_P-wetherbeei_contig155.1.1 ID=mRNA_P-wetherbeei_contig155.1.1|Name=mRNA_P-wetherbeei_contig155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig155:243..786- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGCGTCACAGGACGGGAATCTAAACCAGTACTGGTATTCTCGGGC
GACGATCGAAGCGATGGTCGCGGAAGTCGTAGAGCACGGCGCCGGCGGGA
CGGCCTTCCTGTCGACGCCCAGCGTGTACTTCTCGTTGCCGGAGAACACG
AGGTCGGCTTGCAAGTGCTTCGATATCGACGACAAGTGGGCAAGGGATCC
CGGATTCGTCCATTACGATTTCAACCGCCCCGAAGACATCCCCGAAACTC
TGCGCAGCGCCTTTGACATGGTGGTAATCGACCCGCCCTTCATCACCGAA
GAGGTGTGGCGGGAATATGCTACTGCCGCACGCATGCTGCTGAAGTCCGG
CGGCGGG
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