prot_P-wetherbeei_contig15487.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15487.1.1
Unique Nameprot_P-wetherbeei_contig15487.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length170
Homology
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A835ZBY1_9STRA (60S ribosomal protein L10A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBY1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.060e-63
Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            +++C+LGNAVHCE AEA+G+DKMSVEDLKKFNKNKK+IKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFP LVA  DD+QEK DTVRATIKFQMKKVMCLSVAVANV Q+++E+
Sbjct:   74 LKICMLGNAVHCEKAEALGMDKMSVEDLKKFNKNKKIIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPTLVAATDDIQEKADTVRATIKFQMKKVMCLSVAVANVEQTKDEI 190          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A6V1MVV2_HETAK (Ribosomal protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6V1MVV2_HETAK)

HSP 1 Score: 192 bits (487), Expect = 7.510e-59
Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEVS 118
            M VCVLGNAVHCE A  IGID MSVEDLKK NKNKK+IKK AKKY AFLASDTLIKQIPRLLGPGL KAGKFP LVA  +DLQEK+DTVRATIKFQMKKVMC+SVAV N NQ+QEE+S
Sbjct:   74 MTVCVLGNAVHCEQAAQIGIDAMSVEDLKKLNKNKKLIKKLAKKYMAFLASDTLIKQIPRLLGPGLNKAGKFPTLVASGEDLQEKVDTVRATIKFQMKKVMCMSVAVGNCNQAQEEIS 191          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: D8LNU8_ECTSI (60S ribosomal protein L10A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNU8_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.560e-58
Identity = 95/117 (81.20%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            M++C+LGNAVHCE AE IG+D+MSVEDLKKFNKNK +IKKFAKKYDAFLASD+LIKQIPRLLGPGLTKAGKFP LV   D+LQ K+DTVRATIKFQMKKVMCLSVAVANV Q + E+
Sbjct:   75 MKLCMLGNAVHCEQAEQIGLDRMSVEDLKKFNKNKNLIKKFAKKYDAFLASDSLIKQIPRLLGPGLTKAGKFPTLVNAGDNLQSKVDTVRATIKFQMKKVMCLSVAVANVEQPKNEI 191          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A7S4E450_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E450_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.990e-56
Identity = 91/117 (77.78%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            ++ C++GNAVHCE AE IG+DKMSV+DLKKFNKNKKVIKKFAKK+DAFLASDTLIKQIPRLLGPGLTKAGKFP L+ G  DL EKID VRATIKFQMKKVMCL+VAV NV+  + ++
Sbjct:   74 LKCCIIGNAVHCEEAERIGVDKMSVDDLKKFNKNKKVIKKFAKKFDAFLASDTLIKQIPRLLGPGLTKAGKFPTLIEGGADLTEKIDGVRATIKFQMKKVMCLNVAVGNVSMEKAQI 190          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A7S2SBK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBK4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 4.580e-56
Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            M+VCVLGNAVHCE AE IG++  SVEDLKKFNKNKK+IKKFAKKYDAF+ASDTLIKQIPRLLGPGLTKAGKFP L+A   +LQE IDT++ATIKFQMKKVMCL+VAV N+ Q+ +E+
Sbjct:   90 MKVCVLGNAVHCEEAERIGVEHKSVEDLKKFNKNKKIIKKFAKKYDAFVASDTLIKQIPRLLGPGLTKAGKFPTLIAPGQELQECIDTLKATIKFQMKKVMCLNVAVGNLGQTHDEI 206          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A485KRP2_9STRA (Ribosomal protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485KRP2_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.120e-53
Identity = 86/117 (73.50%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            +++CV+GNAVHCE AE  G +  +V+DLKKFNKNKKVIKK+AKKYDAFLASDTLIKQIPRLLGP L KAGKFP L++GN+D+ EK +TVRATIKFQMKKVMCL++AVA+V Q +EE+
Sbjct:   74 LKICVIGNAVHCELAEKNGFEFSTVDDLKKFNKNKKVIKKYAKKYDAFLASDTLIKQIPRLLGPALNKAGKFPTLISGNEDINEKANTVRATIKFQMKKVMCLNLAVAHVGQPKEEI 190          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: H3GAM0_PHYRM (Ribosomal protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GAM0_PHYRM)

HSP 1 Score: 177 bits (449), Expect = 3.450e-53
Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            M++CVLGNA+HCE AE  G + M+V+DLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGL KAGKFP LV  ND L EK D VRATIKFQMKKVMCL+VA+ +V   ++++
Sbjct:   67 MKICVLGNAIHCEMAEKEGFEYMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVTANDSLTEKADQVRATIKFQMKKVMCLNVAIGHVGLDKQQI 183          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A0P5JKX7_9CRUS (Ribosomal protein (Fragment) n=9 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5JKX7_9CRUS)

HSP 1 Score: 177 bits (449), Expect = 4.020e-53
Identity = 88/117 (75.21%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            M++CVLGNAVHCE AE  G + M+V+DLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGL KAGKFP LV+ N+ L EK D VRATIKFQMKKVMCL+VA+ +V   ++E+
Sbjct:   72 MKICVLGNAVHCELAEKEGFEFMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVSSNEGLTEKADAVRATIKFQMKKVMCLNVAIGHVGLDKQEI 188          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: K3WQN7_GLOUD (Ribosomal protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WQN7_GLOUD)

HSP 1 Score: 177 bits (448), Expect = 6.040e-53
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            M++CVLGNAVHCE AE  G + M+V+DLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGL KAGKFP LV  N+ L EK D VRATIKFQMKKVMCL+VA+ +V    EE+
Sbjct:   74 MKICVLGNAVHCEMAEKAGYEFMTVDDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLNKAGKFPTLVGSNEGLGEKADQVRATIKFQMKKVMCLNVAIGHVGLKPEEI 190          
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Match: A0A7S4I0A1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I0A1_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.370e-53
Identity = 83/117 (70.94%), Postives = 103/117 (88.03%), Query Frame = 0
Query:    1 MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLASDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKVMCLSVAVANVNQSQEEV 117
            ++ C+LGNA HCE A+ IG+D MSVEDLKK NKNKK++KK AK+YD FLASD +IKQIPRLLGPGLTKAGKFP L++ +DD+QEKID V++TIKFQMKKVMCL+VAVANV+  +++V
Sbjct:   19 LKCCMLGNAAHCEQADRIGVDHMSVEDLKKLNKNKKLVKKLAKRYDFFLASDNMIKQIPRLLGPGLTKAGKFPTLLSSSDDMQEKIDEVKSTIKFQMKKVMCLNVAVANVDMDKQQV 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15487.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBY1_9STRA6.060e-6384.6260S ribosomal protein L10A n=1 Tax=Tribonema minus... [more]
A0A6V1MVV2_HETAK7.510e-5983.05Ribosomal protein n=3 Tax=Sar TaxID=2698737 RepID=... [more]
D8LNU8_ECTSI1.560e-5881.2060S ribosomal protein L10A n=2 Tax=Ectocarpus TaxI... [more]
A0A7S4E450_9STRA1.990e-5677.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SBK4_9STRA4.580e-5677.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A485KRP2_9STRA2.120e-5373.50Ribosomal protein n=6 Tax=Aphanomyces TaxID=100860... [more]
H3GAM0_PHYRM3.450e-5374.36Ribosomal protein n=4 Tax=Phytophthora TaxID=4783 ... [more]
A0A0P5JKX7_9CRUS4.020e-5375.21Ribosomal protein (Fragment) n=9 Tax=Daphnia magna... [more]
K3WQN7_GLOUD6.040e-5376.07Ribosomal protein n=4 Tax=Pythiaceae TaxID=4782 Re... [more]
A0A7S4I0A1_9STRA6.370e-5370.94Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 79..99
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..121
NoneNo IPR availablePANTHERPTHR23105:SF10160S RIBOSOMAL PROTEIN L10Acoord: 1..121
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 1..93
e-value: 8.2E-36
score: 124.0
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 2..119
e-value: 2.0E-21
score: 76.7
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 1..117
e-value: 1.61079E-30
score: 108.04
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15487contigP-wetherbeei_contig15487:213..1350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15487.1.1mRNA_P-wetherbeei_contig15487.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15487 213..1481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15487.1.1 ID=prot_P-wetherbeei_contig15487.1.1|Name=mRNA_P-wetherbeei_contig15487.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
MQVCVLGNAVHCEAAEAIGIDKMSVEDLKKFNKNKKVIKKFAKKYDAFLA
SDTLIKQIPRLLGPGLTKAGKFPALVAGNDDLQEKIDTVRATIKFQMKKV
MCLSVAVANVNQSQEEVSRPISRFLVCWPVFSFGPAFSGGHVGILVRRSA
AFVEQFDPAVGFMPASCTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016095Ribosomal_L1_3-a/b-sand
IPR028364Ribosomal_L1/biogenesis
IPR023674Ribosomal_L1-like