mRNA_P-wetherbeei_contig15468.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15468.1.1
Unique NamemRNA_P-wetherbeei_contig15468.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A521YZJ4_9PROT (Chaperone SurA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YZJ4_9PROT)

HSP 1 Score: 283 bits (725), Expect = 1.110e-90
Identity = 164/256 (64.06%), Postives = 214/256 (83.59%), Query Frame = 1
Query:   25 IAVAAPAFA-QRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            +AV+ PA A Q  SLVDRIVAVVN EV+T SEL + +  AERQ++RQ TP PER VL  XXXXXXXXXXXX  MA+D+G+R+D++QLDRA+ RIA+NN MTLA FR+ALE+DGV FD +R+E+R++I+L+RLREREVDDK+Q+SDSEI+L++ E +    Q    EYN++HVL+R+PEQA+PERI+AA+A+AEK +AEAR+G DFA +AAS+SDAPDA+SGG +GWR+H+RLPE+FA  L  ++PG +SEVLRSPA
Sbjct:   11 LAVSPPAAAAQNASLVDRIVAVVNKEVITLSELNEAVSAAERQLRRQGTPAPERPVLXXXXXXXXXXXXXXXXMARDSGIRVDDLQLDRAVQRIAQNNNMTLADFRRALERDGVVFDTWREELRDQILLSRLREREVDDKVQVSDSEIDLFLEEMK---TQPERAEYNVSHVLVRIPEQASPERIEAARAKAEKALAEARSGTDFAAVAASYSDAPDAISGGALGWRSHERLPEVFAAVLAKMKPGEVSEVLRSPA 263          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A1F4F5N1_9PROT (Chaperone SurA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4F5N1_9PROT)

HSP 1 Score: 279 bits (714), Expect = 5.070e-89
Identity = 159/249 (63.86%), Postives = 206/249 (82.73%), Query Frame = 1
Query:   43 AFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            A AQ  SLVDRIVAVVN EV+T SEL D +  AERQ++RQ TP PER VL  XXXXXXXXXXXX  MA+D+G+R+DE+QLDRA+ RIA+NN MTL  FR+ LE+DGV FD +R+++R +I+L+RLREREVDDK+Q+SD EI+L++ E +   +Q    EYN++HVL+R+PEQA+PER++AA+ARA+K +AEAR+G DFA +AAS+SDAPDA+SGG +GWR+H+RLPELFA AL  ++ G +SEVLRSPA
Sbjct:   18 AAAQSASLVDRIVAVVNKEVITFSELNDAVAAAERQLRRQGTPAPERPVLXXXXXXXXXXXXXXXXMARDSGVRVDELQLDRAVQRIAQNNNMTLTDFRRVLERDGVPFDAWREDLREQILLSRLREREVDDKVQVSDGEIDLFLEEMK---SQPERAEYNVSHVLVRIPEQASPERLEAARARADKALAEARSGVDFASVAASYSDAPDAISGGALGWRSHERLPELFAGALAKMKAGEVSEVLRSPA 263          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A537FSC7_9PROT (Molecular chaperone SurA (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537FSC7_9PROT)

HSP 1 Score: 274 bits (700), Expect = 4.150e-88
Identity = 160/252 (63.49%), Postives = 206/252 (81.75%), Query Frame = 1
Query:   34 AAPAFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            AAPA  Q +++VDRIVAVVN EVVT SEL D +  AERQ++RQNTP PER VLE XXXXXXXXXXXX  MA++TG+R+DE+QLDRA+ R+AE+NKM LA FR+ALE DGV F+ +R+++R +I+LTRLREREVDDKIQ+SD+E+ L++ E +   A+   VEY ++H+L+R+PEQA+PER+ AA+A+AE  +A+ARAG DF +LAAS+SDA DAL GG +GWR  DRLPELFA  L ++ PG +SEVLRSPA
Sbjct:   17 AAPA--QSVTVVDRIVAVVNKEVVTLSELNDAVGRAERQLRRQNTPAPEREVLEXXXXXXXXXXXXXXXMARETGIRVDELQLDRAVQRVAESNKMALAEFRRALEADGVSFELWREDLREQILLTRLREREVDDKIQVSDTEVALFLEEMKAAPAER--VEYQLSHILVRVPEQASPERLAAARAKAESALAQARAGGDFGRLAASYSDAADALQGGSLGWRTQDRLPELFAATLLNMNPGDVSEVLRSPA 264          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A537BCQ9_9PROT (Chaperone SurA n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BCQ9_9PROT)

HSP 1 Score: 277 bits (708), Expect = 4.180e-88
Identity = 146/247 (59.11%), Postives = 193/247 (78.14%), Query Frame = 1
Query:   49 AQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            AQ +++VDRIVAVVN EVVT SEL + +  AERQ++RQ+TP PER VL+             LQMA++TG+R+DE+QLDRA+ RIAENN M LA FR+ LE DGV F+ +R+++R +I+LTRLREREVDDKIQ+SD+E+ L++ E +   A +  VEY+++H+L+R+PEQA+PER++AA+A+AEK +A+ARAG DF KLAAS+SDA DAL GG +GWR  DRLPELFA  L D+ PG +S VLRSPA
Sbjct:   20 AQSVTVVDRIVAVVNKEVVTLSELNEAVGRAERQLRRQSTPAPERDVLQHQMLERLILEKAQLQMARETGIRVDELQLDRAVQRIAENNNMALAEFRKTLEADGVSFEGWREDLREQILLTRLREREVDDKIQVSDTEVNLFLEEMKA--APVERVEYHLSHILVRVPEQASPERLEAARAKAEKALAQARAGGDFGKLAASYSDAADALQGGSLGWRTQDRLPELFAATLLDMNPGDVSPVLRSPA 264          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A1F4B500_9PROT (Chaperone SurA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B500_9PROT)

HSP 1 Score: 276 bits (706), Expect = 9.130e-88
Identity = 157/259 (60.62%), Postives = 205/259 (79.15%), Query Frame = 1
Query:   25 IAVAAPAFAQRIS----LVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            +A AA +FAQ  +    +VDRIVAVVN EVVT+SELR+R+  AER+++RQ TP+P+R VLE+ XXXXXXX    LQ+A + G+R+DE+QLDRA+ RIAE N MTL +FR+ALE DGV   RFR+E+R +IM+ RLREREVD++I++SD+EI+LY+ + +  G   G  E+N AH+L+RLP+QA+PERI+  +ARAEKV+AEARAG DF+ LAAS SDA DAL GG MGWR  DRLPE+F  AL+ L+PG +S+VLRSPA
Sbjct:   11 LAAAANSFAQTPAPVPLVVDRIVAVVNKEVVTSSELRERVEYAERELRRQGTPLPDRAVLERQXXXXXXXDKAQLQLATENGIRVDELQLDRAIDRIAETNNMTLTAFRRALENDGVSLPRFREEVRQQIMMQRLREREVDERIEVSDTEIDLYLEQQKAGGG--GRAEFNFAHILVRLPDQASPERIEQGRARAEKVLAEARAGGDFSALAASHSDAGDALKGGQMGWRPSDRLPEIFGGALRVLKPGEVSDVLRSPA 267          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A521VZI7_9PROT (Chaperone SurA n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VZI7_9PROT)

HSP 1 Score: 275 bits (703), Expect = 2.370e-87
Identity = 154/255 (60.39%), Postives = 200/255 (78.43%), Query Frame = 1
Query:   28 AVAAPAFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENE-GPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            A+A  A AQ + +VDRIVAVVN EV+T SELR+R+ +A R++ RQ TP+PER +LE+            LQ+A + G+R+DE+QLDRA+ RIAE+NK+TLA+FR+ LE DGV   RFR+E+R +I++ RLREREVDD+I++S++EI+LY+ E + G G +   VEYNIA VL+RLP+QA+PERI  A+ARAEKV AEARAGADFA LAAS+SDA DAL GG MGWRA DRLP+L A AL+ L+PG ++EVLRSPA
Sbjct:   13 ALALQAQAQPVRMVDRIVAVVNKEVITASELRERVELAARELGRQRTPLPERALLERQVLERLIIDKAQLQLAVEGGVRVDELQLDRAIDRIAESNKLTLAAFRKVLEDDGVSMARFREEVRQQIVMQRLREREVDDRIEVSETEIDLYLEEQKAGRGER---VEYNIAQVLVRLPDQASPERIAQARARAEKVHAEARAGADFAALAASYSDAGDALQGGQMGWRASDRLPDLVAGALRKLKPGEVTEVLRSPA 264          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A1F4D0V1_9PROT (Chaperone SurA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4D0V1_9PROT)

HSP 1 Score: 274 bits (700), Expect = 6.700e-87
Identity = 156/254 (61.42%), Postives = 202/254 (79.53%), Query Frame = 1
Query:   34 AAP-AFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEG-PGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            AAP A AQ I L+DRIVAVVN EV+T SEL + +  AERQ++R  T  P R VLE+  XXXXXX    LQMA++ G+R+DE QLDRA+ R+A+NNKM LA FR+ALE DGV FD +R+++R +I+L+RLREREVD+KIQ+SD+EI+L++ E +  PG     VEYN+AH+L+R+PEQA PER++AA+ RA K +AEARAG DFA+LAAS+SDAPDA+ GG +GWR+H+RLPELF+ AL  + PG +SEVLRSPA
Sbjct:   13 AAPVAHAQGIVLLDRIVAVVNKEVITLSELNETVATAERQLRRSGTRAPAREVLERQMXXXXXXDKAQLQMARERGIRVDEAQLDRAVQRVAQNNKMALADFRRALETDGVPFDAWREDLREQIILSRLREREVDEKIQVSDTEIDLFLEEMKTRPGE---GVEYNLAHILVRVPEQAAPERVEAARGRAAKALAEARAGEDFARLAASYSDAPDAMRGGAIGWRSHERLPELFSGALARMNPGEVSEVLRSPA 263          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A536XWT2_9PROT (Chaperone SurA n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XWT2_9PROT)

HSP 1 Score: 268 bits (686), Expect = 8.340e-85
Identity = 145/260 (55.77%), Postives = 203/260 (78.08%), Query Frame = 1
Query:   10 AASAAIAVAAPAFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            AA+A  A AAPA    ++LVDRIVAVVN +VVT SEL + + +AERQ++RQ TP PER VLE+            LQ+A++TG+RIDE+QLDRA+ RIA++N MTLA FR+ALE DGV FD +R+E+R +++LTRLREREV++++Q+SD+E++L++ + +    +    EYN+AH+L+R+PE A+PERI+ A++RAE+ +AE R+GA FA++AA++SDAPDAL GG +GWR H+RLPELFA AL  ++PG +SE LRSPA
Sbjct:   10 AATALFAGAAPA----VTLVDRIVAVVNKDVVTYSELNEAVGMAERQLRRQGTPAPERAVLERQMLERLILDKAQLQLARETGIRIDELQLDRAVERIAQSNNMTLADFRRALEGDGVAFDAWRNEVRQQMILTRLREREVENRVQVSDTEVDLFLEQLKNRPDE--GAEYNLAHILVRVPEGASPERIRQARSRAEQAVAEVRSGAPFARVAAAYSDAPDALQGGALGWRNHERLPELFADALAKMKPGDISEPLRSPA 263          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A1F4EU87_9PROT (Chaperone SurA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EU87_9PROT)

HSP 1 Score: 266 bits (680), Expect = 6.860e-84
Identity = 143/258 (55.43%), Postives = 198/258 (76.74%), Query Frame = 1
Query:   16 SAAIAVAAPAFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            +A +A++  A AQR+ L+DRIVAVVN E +T +EL   +  AERQ++RQ   +PERGVLE             LQ A++ G+R++E+QLDRA+ RIAE+NKM LA FR+ALE+DG+ F+ FRD++R+EI+LTRLREREVD  IQ+SD+EI+L++ E + PGA    +EYN+A++L+R+PEQA+PERI+ A+A+AE    EA AG DFA+LAAS+SDAPDAL GG +GWR  +RLP+LFA A+++++PG +SE LRS A
Sbjct:    8 AALLALSFAAQAQRVVLLDRIVAVVNKESITLTELNVAVASAERQLRRQGIQLPERGVLEGQILERLILDRAQLQRAREAGIRVEELQLDRAVQRIAEDNKMPLAEFRRALERDGLSFEAFRDDVRDEIVLTRLREREVDQNIQVSDNEIDLFLEEAKQPGA--ASLEYNLANILVRIPEQASPERIEQARAKAESARKEALAGGDFARLAASYSDAPDALQGGALGWRTQERLPDLFAAAVREMKPGDVSEPLRSAA 263          
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Match: A0A536SUZ2_9PROT (Molecular chaperone SurA (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SUZ2_9PROT)

HSP 1 Score: 262 bits (669), Expect = 8.400e-84
Identity = 145/247 (58.70%), Postives = 202/247 (81.78%), Query Frame = 1
Query:   49 AQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQMKRQNTPVPERGVLEKXXXXXXXXXXXXLQMAKDTGLRIDEVQLDRALGRIAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQISDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAEKVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDLRPGGLSEVLRSPA 789
            A+ + LVDRIVAVVN +VVT SEL + I +AERQ+ RQ TP PER VLE+ XXXXXXXX   LQ+A+++GLRID++QLDRA+ RIA++N MTLA FR+ALE DGV FD +R+++R ++ + RLREREV++++Q++DSE++L++ + +   A+    EYN+AHVL+R+PE A+PERI+ A+ RAE+ +AEA++G  FA++AAS+SDAPDAL GG++GWR+H+RLPE+FA AL  L+PG +SE LRSPA
Sbjct:   19 ARAVVLVDRIVAVVNKDVVTYSELHEAIGMAERQLARQGTPAPERAVLERQXXXXXXXXKAQLQLARESGLRIDDLQLDRAVERIAQSNNMTLADFRRALEADGVSFDAWRNDVRQQMTMARLREREVENRVQVTDSEVDLFLEQLKTRPAE--GTEYNLAHVLVRVPEGASPERIRQARGRAEQALAEAKSGVPFARVAASYSDAPDALQGGVIGWRSHERLPEIFAEALLHLKPGEVSEPLRSPA 263          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15468.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YZJ4_9PROT1.110e-9064.06Chaperone SurA n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A1F4F5N1_9PROT5.070e-8963.86Chaperone SurA n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A537FSC7_9PROT4.150e-8863.49Molecular chaperone SurA (Fragment) n=1 Tax=Betapr... [more]
A0A537BCQ9_9PROT4.180e-8859.11Chaperone SurA n=4 Tax=Betaproteobacteria bacteriu... [more]
A0A1F4B500_9PROT9.130e-8860.62Chaperone SurA n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A521VZI7_9PROT2.370e-8760.39Chaperone SurA n=3 Tax=Betaproteobacteria bacteriu... [more]
A0A1F4D0V1_9PROT6.700e-8761.42Chaperone SurA n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A536XWT2_9PROT8.340e-8555.77Chaperone SurA n=2 Tax=Betaproteobacteria bacteriu... [more]
A0A1F4EU87_9PROT6.860e-8455.43Chaperone SurA n=1 Tax=Betaproteobacteria bacteriu... [more]
A0A536SUZ2_9PROT8.400e-8458.70Molecular chaperone SurA (Fragment) n=1 Tax=Betapr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15468contigP-wetherbeei_contig15468:1..789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1163617.SCD_n02560
Preferred namesurA
PFAMsRotamase,Rotamase_3,SurA_N
Model size789
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03771
Hectar predicted targeting categorysignal peptide
Exons1
Evalue8.17e-73
EggNOG OGsCOG0760@1|root,COG0760@2|Bacteria,1MVB3@1224|Proteobacteria,2VHHS@28216|Betaproteobacteria
EC5.2.1.8
DescriptionChaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Cds size789
COG categoryM
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186057.2353806-CDS-P-wetherbeei_contig15468:0..7891683186057.2353806-CDS-P-wetherbeei_contig15468:0..789Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15468 1..789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15468.1.1prot_P-wetherbeei_contig15468.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15468 1..789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15468.1.1

>prot_P-wetherbeei_contig15468.1.1 ID=prot_P-wetherbeei_contig15468.1.1|Name=mRNA_P-wetherbeei_contig15468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
FACAASAAIAVAAPAFAQRISLVDRIVAVVNSEVVTNSELRDRIVVAERQ
MKRQNTPVPERGVLEKQVLERLVLEKAQLQMAKDTGLRIDEVQLDRALGR
IAENNKMTLASFRQALEKDGVQFDRFRDEIRNEIMLTRLREREVDDKIQI
SDSEIELYMAENEGPGAQLGDVEYNIAHVLIRLPEQATPERIQAAKARAE
KVIAEARAGADFAKLAASFSDAPDALSGGLMGWRAHDRLPELFATALKDL
RPGGLSEVLRSPA
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mRNA from alignment at P-wetherbeei_contig15468:1..789-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15468.1.1 ID=mRNA_P-wetherbeei_contig15468.1.1|Name=mRNA_P-wetherbeei_contig15468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig15468:1..789- (Phaeothamnion wetherbeei SAG_119_79)
TTCGCCTGCGCCGCTTCTGCGGCCATCGCCGTCGCGGCGCCCGCCTTCGC CCAGCGCATATCGCTCGTCGACCGCATCGTCGCCGTGGTCAATTCCGAGG TCGTGACGAATTCCGAGCTGCGCGACCGCATCGTGGTGGCCGAGCGGCAG ATGAAGCGCCAGAACACGCCCGTTCCCGAGCGGGGCGTGCTCGAGAAGCA GGTGCTCGAGCGGCTGGTCCTCGAGAAGGCGCAGCTGCAGATGGCCAAGG ACACCGGGTTGCGGATCGACGAGGTTCAGCTCGACCGGGCACTCGGGCGG ATCGCCGAGAACAACAAGATGACGCTCGCGAGCTTTCGCCAGGCCCTCGA GAAGGACGGCGTGCAGTTCGACCGGTTCCGCGACGAGATCCGCAACGAGA TCATGCTCACCCGCCTGCGCGAGCGGGAGGTCGACGACAAGATCCAGATC AGCGACAGCGAGATCGAGCTGTACATGGCCGAGAACGAGGGGCCCGGCGC GCAGCTCGGCGACGTCGAGTACAACATCGCGCACGTGCTGATCCGCCTGC CGGAGCAGGCGACGCCCGAGCGCATTCAGGCGGCGAAGGCGCGCGCCGAG AAGGTGATCGCCGAGGCGAGGGCCGGCGCGGATTTCGCCAAGCTCGCGGC GAGCTTCTCGGATGCGCCGGACGCGCTTTCCGGGGGGCTGATGGGATGGC GCGCGCATGACCGCCTTCCCGAGCTCTTCGCCACCGCGCTGAAGGACCTG CGCCCGGGCGGGCTGTCGGAGGTGCTGCGCAGCCCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15468:1..789-

>mRNA_P-wetherbeei_contig15468.1.1 ID=mRNA_P-wetherbeei_contig15468.1.1|Name=mRNA_P-wetherbeei_contig15468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig15468:1..789- (Phaeothamnion wetherbeei SAG_119_79)
TTCGCCTGCGCCGCTTCTGCGGCCATCGCCGTCGCGGCGCCCGCCTTCGC
CCAGCGCATATCGCTCGTCGACCGCATCGTCGCCGTGGTCAATTCCGAGG
TCGTGACGAATTCCGAGCTGCGCGACCGCATCGTGGTGGCCGAGCGGCAG
ATGAAGCGCCAGAACACGCCCGTTCCCGAGCGGGGCGTGCTCGAGAAGCA
GGTGCTCGAGCGGCTGGTCCTCGAGAAGGCGCAGCTGCAGATGGCCAAGG
ACACCGGGTTGCGGATCGACGAGGTTCAGCTCGACCGGGCACTCGGGCGG
ATCGCCGAGAACAACAAGATGACGCTCGCGAGCTTTCGCCAGGCCCTCGA
GAAGGACGGCGTGCAGTTCGACCGGTTCCGCGACGAGATCCGCAACGAGA
TCATGCTCACCCGCCTGCGCGAGCGGGAGGTCGACGACAAGATCCAGATC
AGCGACAGCGAGATCGAGCTGTACATGGCCGAGAACGAGGGGCCCGGCGC
GCAGCTCGGCGACGTCGAGTACAACATCGCGCACGTGCTGATCCGCCTGC
CGGAGCAGGCGACGCCCGAGCGCATTCAGGCGGCGAAGGCGCGCGCCGAG
AAGGTGATCGCCGAGGCGAGGGCCGGCGCGGATTTCGCCAAGCTCGCGGC
GAGCTTCTCGGATGCGCCGGACGCGCTTTCCGGGGGGCTGATGGGATGGC
GCGCGCATGACCGCCTTCCCGAGCTCTTCGCCACCGCGCTGAAGGACCTG
CGCCCGGGCGGGCTGTCGGAGGTGCTGCGCAGCCCGGCG
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