mRNA_P-wetherbeei_contig15464.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15464.2.1
Unique NamemRNA_P-wetherbeei_contig15464.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A3C0TVI2_9PROT (Cell shape-determining protein MreC n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TVI2_9PROT)

HSP 1 Score: 386 bits (992), Expect = 6.650e-132
Identity = 190/299 (63.55%), Postives = 242/299 (80.94%), Query Frame = 1
Query:   25 GGRLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYKGHEAPPGTIGVVPMDVTSAKDGGDVTP 921
            G R+A+ LQDLGQRLSF+++  AA+ L LAG+AE+E+ME FR  ++D+TAP+L+++SRP+Q LR  F ++D+Y +T EENR+LR K+ERLQ+W ALALKL+ EN+EFRSLLN  DVP  P++SARVIGD+GSPFVHTVLIN G+KHGVQK MPV G++GLIG++VS GKQV+RVLLLSDLNSRVPVRLE +GYQ+VLAGDN+ QP L YLP R +I +GDR+VTSGHGGVFPP IPVG VS++  G +  EVR+Q F DE RLSFV++LQ+   E PPGT+G     + S  +  D+TP
Sbjct:   11 GNRMAVSLQDLGQRLSFLLVAAAAVVLFLAGKAESEKMEDFRALVTDWTAPVLDVASRPVQMLRESFSQLDVYLSTTEENRLLREKVERLQSWQALALKLQQENREFRSLLNMHDVPPMPYLSARVIGDMGSPFVHTVLINAGKKHGVQKDMPVTGAEGLIGRIVSTGKQVSRVLLLSDLNSRVPVRLEANGYQSVLAGDNKRQPLLVYLPDRAQIKVGDRVVTSGHGGVFPPGIPVGVVSAVKHGQANVEVRVQTFVDEQRLSFVQILQFSDPEYPPGTVGEKKAGLNSRSEK-DITP 308          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A351T1Q7_9PROT (Cell shape-determining protein MreC n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T1Q7_9PROT)

HSP 1 Score: 265 bits (677), Expect = 6.050e-84
Identity = 136/270 (50.37%), Postives = 184/270 (68.15%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            RLA+  Q LGQR SF+ L+ AA  LL+ GR +   +      +++  AP+L+L +RP+QALRSG  EVD Y N L EN  LR ++ RL+ W   AL LE EN   + LLN  D+P + FIS RVIGD  SPFV T+LINVG + GV++GM V+G  GL+G+++S G   +R+LLL+DLNS+VPV +E  GY+AVL+G+N+  PQL YLP  V+IN GDR+VTSGHGG+FPP +PVG VS++          ++ F D    SFVR+L+Y+
Sbjct:   16 RLAVNFQALGQRFSFLALLAAACTLLIFGRVDYVPVWRISMFITEVAAPVLDLMARPVQALRSGVIEVDHYLNALSENERLREEVRRLRNWQVTALNLEQENSRLKGLLNTADLPSAHFISGRVIGDATSPFVDTLLINVGARQGVREGMAVVGEGGLLGRIISTGADASRILLLTDLNSKVPVIVEPGGYRAVLSGNNDGLPQLLYLPNNVRINAGDRLVTSGHGGMFPPGVPVGAVSAVRPADRAVAPLVRPFVDNGNTSFVRILRYE 285          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2A5EVZ6_9HYPH (Cell shape-determining protein MreC n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5EVZ6_9HYPH)

HSP 1 Score: 243 bits (619), Expect = 1.610e-75
Identity = 137/308 (44.48%), Postives = 191/308 (62.01%), Query Frame = 1
Query:   13 IDQGGGRLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK-----GHEAPPGTI-----GVVPMDVTSAKDG 906
            IDQ   + A+ ++D+  R+S I +V  A  LLL GRAET  ++  R  ++D  APLLEL+SRP+ A R   E  D Y    +EN  LR +  RL AW   ALKLE++   F +LLN Q  P   +++ RV+GD G PFV T ++NVG    V+ G  VI +DGLIG++V+ G + +R+LLL+DLNSRVPV +E S  +AVLAGDN   P+L Y+PA   I +GDR+VTSGHGG+ PP +PVG V   D G     +R+Q++SD  RL  +RVL+Y+       + PP  +     G +P++   A +G
Sbjct:    2 IDQAN-KPALPIRDVSGRVSLIFMVTLAAALLLLGRAETYVVDRARQVVTDMAAPLLELASRPVAAARRVVESTDQYAYVFDENEQLREENARLLAWKEAALKLEAKVARFEALLNVQVDPTISYVTGRVVGDSGGPFVETFIVNVGSDQNVESGQAVIDTDGLIGRIVATGARASRILLLTDLNSRVPVTIEPSRARAVLAGDNSSWPRLEYVPAGAHIELGDRVVTSGHGGLLPPGLPVGIVIQTDDGF----LRVQSYSDRSRLDMIRVLRYQFPTEVDRQDPPLVLTPEGAGEIPLEQPGASEG 304          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2Z4UJU0_9HYPH (Cell shape-determining protein MreC n=4 Tax=Bacteria TaxID=2 RepID=A0A2Z4UJU0_9HYPH)

HSP 1 Score: 234 bits (598), Expect = 1.230e-72
Identity = 124/255 (48.63%), Postives = 166/255 (65.10%), Query Frame = 1
Query:   76 IILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            I +V  A  LLL GRAET  ++  R  ++D  APLLEL+SRP+ A R   E  D Y    +EN  LR +  RL AW   ALKLE++   F +LLN Q  P   +++ RV+GD G PFV T++ NVG   GV+ G  VI SDGLIG++V+ G + +R+LLL+DLNSRVPV +E S  +AVLAGDN + P+L +LPA   ++ GDR+VTSG GG+ PP +P+G +   D G     +R+Q FSD  RL  +RVLQY+
Sbjct:    2 IFMVTLAAALLLLGRAETYVVDRARQVVTDLAAPLLELASRPVSAARRVVESTDQYAYVFDENERLREENARLLAWKEAALKLEAKVARFEALLNVQVDPSISYVTGRVVGDSGGPFVETIIANVGSTQGVESGQAVIDSDGLIGRIVATGSEASRILLLTDLNSRVPVVVEPSQTRAVLAGDNSIWPRLEFLPALASVSAGDRVVTSGDGGLLPPGLPIGALVEADDGF----LRVQTFSDRSRLDMIRVLQYE 252          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2E1EE13_9HYPH (Cell shape-determining protein MreC n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E1EE13_9HYPH)

HSP 1 Score: 235 bits (599), Expect = 1.610e-72
Identity = 128/270 (47.41%), Postives = 175/270 (64.81%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            R A+  ++   R+S + ++  A  LLL GRAET   +  R  ++D  APLLE++SRP+ A R   E  D Y    +EN  LRA+  RL AW   ALKL+++   + +LLN Q  P   + S RV+ D G PFV TVL+NVG + G + G  VI +DGL+G++VS G + +RVLLL+DLNSR+PV +E + Y+AVLAGDN   P+L YL ++  I+ GDR+VTSG GG+ PP +PVG V    SG    ++R+Q FSD  RL FVRVLQY+
Sbjct:    5 RSALPFREFSHRISLVFMLTLAAALLLLGRAETYVFDRARQVVTDLAAPLLEVASRPVAATRRIIERTDEYAYVFDENERLRAENARLLAWKEEALKLQAKVARYEALLNVQVDPSIDYASGRVVSDSGGPFVDTVLVNVGAEQGARSGQAVIDTDGLVGRIVSTGPKASRVLLLTDLNSRIPVVIEPAHYKAVLAGDNTDWPKLEYLASQSAISPGDRVVTSGDGGLIPPGLPVGLVIQTSSG----DLRVQTFSDRGRLDFVRVLQYE 270          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A6N6VGD5_9HYPH (Cell shape-determining protein MreC n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VGD5_9HYPH)

HSP 1 Score: 236 bits (601), Expect = 7.460e-72
Identity = 124/270 (45.93%), Postives = 178/270 (65.93%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            R A+ ++++  R+S + ++  A  LLL GRAET   +  R  ++D TAPLLE++SRP+ A R   E  D Y    +EN  LRA+  RL AW   AL+LES+   + +LLN Q  P   ++S RV+ D G PFV TV++NVG++ G + G  V+ +DGL+G++V+ GK+ +R+LLL+DLNSR+PV +E + Y+AVLAGDN   P+L YL +   ++ GDR+VTSG GG+ PP IPVG V     G     +R+Q FSD  RL FVR+L+Y+
Sbjct:    7 RSAVPIREISNRISLVFMLTLAAALLLLGRAETYVFDEARQVVTDMTAPLLEIASRPVSAARRVVERTDEYAYVFDENERLRAENARLLAWKDAALRLESKLARYEALLNVQIDPAIKYVSGRVVSDNGGPFVDTVIVNVGREAGAKSGDGVVDTDGLVGRIVATGKKASRILLLTDLNSRIPVVIEPAHYKAVLAGDNTDWPKLEYLASTSSVSPGDRVVTSGDGGLIPPGIPVGVVIQTSDGF----LRVQTFSDRDRLDFVRILKYE 272          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2D4VEN8_9HYPH (Cell shape-determining protein MreC n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VEN8_9HYPH)

HSP 1 Score: 233 bits (594), Expect = 8.300e-72
Identity = 135/296 (45.61%), Postives = 175/296 (59.12%), Query Frame = 1
Query:   49 QDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK-----GHEAPPGTIGVVPMDVTSAKDGGDVTP 921
            ++   RLS I ++  A  LLL GRAET   +  R  ++D  APLLE++SRP+ A R   +  D Y    +EN  LRA+    QAW   ALKLE+    + +LLN Q  P   ++S RV+ D G PFV TVL+NVG   G + G  VI  +GL+G+VVS G   +RVLLL+DLNSRVPV +E S Y+AVLAGDN   P+L YL     +  GDR+VTSG GG+ P  +PVG V   + G    ++R+Q FSD  RL FVRVLQY+       + PP  +   P  V SA   G  TP
Sbjct:   11 REFSHRLSLIFMITLAAALLLLGRAETYVFDRARQTVTDIAAPLLEVASRPVAATRRLIQRTDEYAYVFDENERLRAEXXXXQAWREKALKLEARLARYEALLNVQVDPSIKYVSGRVVSDNGGPFVDTVLVNVGGDQGAESGQAVIDGNGLVGRVVSTGPHASRVLLLTDLNSRVPVAIEPSHYKAVLAGDNTKWPKLEYLAVSGAVAPGDRVVTSGDGGLMPAGLPVGVVIQTNDG----DLRVQMFSDRDRLDFVRVLQYQFPGKVKRQDPPEGLKDQPEPVASAAASGSSTP 302          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A7HW06_PARL1 (Cell shape-determining protein MreC n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HW06_PARL1)

HSP 1 Score: 233 bits (594), Expect = 1.030e-71
Identity = 128/270 (47.41%), Postives = 172/270 (63.70%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            R A+  ++   R+S + ++  A  LLL GRAET   +  R  ++D  APLLE++SRP+ A R   E  D Y    +EN  LRA+  RL AW   ALKL+S+   + +LLN Q  P   +IS RV+ D G PFV TVL+NVG   G + G  VI +DGL+G++VS G + +RVLLL+DLNSRVPV +E + Y AVL+GDN   P+L YL A+  ++ GDR+VTSG GG+ P  +PVG V     G+    +R+Q FSD  RL FVRVLQY+
Sbjct:    5 RTALPFREFSHRISLVFMLTLAAALLLLGRAETYVFDRARQVVTDLAAPLLEVASRPVAATRRIIERTDEYAYVFDENERLRAENARLLAWKEEALKLQSKVARYEALLNVQVDPSINYISGRVVSDSGGPFVDTVLVNVGADKGAESGQAVIDTDGLVGRIVSTGPRASRVLLLTDLNSRVPVVIEPAHYNAVLSGDNTAWPRLEYLAAQSAVSPGDRVVTSGDGGLIPAGLPVGLVIQTSDGS----LRVQTFSDRGRLDFVRVLQYE 270          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2N3E9I5_9PROT (Cell shape-determining protein MreC n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3E9I5_9PROT)

HSP 1 Score: 230 bits (586), Expect = 1.250e-70
Identity = 124/270 (45.93%), Postives = 172/270 (63.70%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            R A+  ++   R+S + ++  A  LLL GRAET   +  R  ++D  APLLE++SRP+ A R   E  D Y    +EN  LRA+  RL AW  +AL LE+    + +LLN Q  P   ++S R + D G PFV TVL+NVG++ G + G+ V+ +DGL+G++VS G + +RVLLL+DLNSRVPV +E + Y+AVLAGDN   P+L YL     ++ GDR+VTSG GG+ P  +PVG V   + G     +R+Q FSD  RL FVRVLQY+
Sbjct:    5 RTALPFREFSHRISLVFMLTLAAALLLLGRAETYVFDQARQVVTDLAAPLLEVASRPVAAARRIIERTDEYAYVFDENERLRAENARLLAWKEMALNLEARVARYEALLNVQLDPSINYVSGRAVSDAGGPFVDTVLVNVGREQGAKSGLAVVDTDGLVGRIVSTGPKASRVLLLTDLNSRVPVVIEPAHYKAVLAGDNTEWPKLEYLTNVSAVSPGDRVVTSGDGGLIPSGLPVGLVIQTNDG----NLRVQTFSDRGRLDFVRVLQYE 270          
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Match: A0A2N3E6S8_9PROT (Cell shape-determining protein MreC n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E6S8_9PROT)

HSP 1 Score: 228 bits (582), Expect = 3.070e-70
Identity = 126/270 (46.67%), Postives = 169/270 (62.59%), Query Frame = 1
Query:   31 RLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFRTALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQAWHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINVGQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSGYQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSSLDSGASKNEVRIQAFSDEHRLSFVRVLQYK 840
            R A+  ++   R+S + ++  A  LLL GRAET   +  R  ++D  APLLE++SRP+ A R   E  D Y    +EN  LRA+  RL AW   A KL+++   F +LLN Q  P   ++S R + D G PFV TVL+N G+  GV+ G  VI +DGL+G+VVS G   +RVLLL+DLNSR+PV +E + Y+AVLAGDN   P+L YL  +  +  GDR+VTSG GG+ PP +PVG V     G     +R+Q FSD  RL FVRVLQY+
Sbjct:    5 RTALPFREFSHRISLVFMLTLAAALLLLGRAETYVFDRARQVVTDLAAPLLEVASRPVAATRRIIERTDEYAYVFDENERLRAENARLLAWKEEAQKLQAKVARFEALLNVQVDPSINYVSGRAVSDSGGPFVDTVLVNAGKDKGVRSGQAVIDTDGLVGRVVSTGPHASRVLLLTDLNSRIPVVVEPAHYKAVLAGDNTDWPRLEYLAVQSAVAPGDRVVTSGDGGLIPPGLPVGLVIQTGEGV----MRVQTFSDRGRLDFVRVLQYE 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15464.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TVI2_9PROT6.650e-13263.55Cell shape-determining protein MreC n=1 Tax=Alphap... [more]
A0A351T1Q7_9PROT6.050e-8450.37Cell shape-determining protein MreC n=2 Tax=Alphap... [more]
A0A2A5EVZ6_9HYPH1.610e-7544.48Cell shape-determining protein MreC n=1 Tax=Rhodob... [more]
A0A2Z4UJU0_9HYPH1.230e-7248.63Cell shape-determining protein MreC n=4 Tax=Bacter... [more]
A0A2E1EE13_9HYPH1.610e-7247.41Cell shape-determining protein MreC n=6 Tax=Alphap... [more]
A0A6N6VGD5_9HYPH7.460e-7245.93Cell shape-determining protein MreC n=1 Tax=Parvib... [more]
A0A2D4VEN8_9HYPH8.300e-7245.61Cell shape-determining protein MreC n=2 Tax=Parvib... [more]
A7HW06_PARL11.030e-7147.41Cell shape-determining protein MreC n=1 Tax=Parvib... [more]
A0A2N3E9I5_9PROT1.250e-7045.93Cell shape-determining protein MreC n=1 Tax=Alphap... [more]
A0A2N3E6S8_9PROT3.070e-7046.67Cell shape-determining protein MreC n=1 Tax=Alphap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15464contigP-wetherbeei_contig15464:463..1383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1282876.BAOK01000001_gene1417
Preferred namemreC
PFAMsMreC
Model size921
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03570
KEGG TC9.B.157.1
Hectar predicted targeting categorysignal anchor
Exons1
Evalue5.2e-73
EggNOG OGsCOG1792@1|root,COG1792@2|Bacteria,1N8ZS@1224|Proteobacteria,2U1FY@28211|Alphaproteobacteria,4BQP8@82117|unclassified Alphaproteobacteria
DescriptionInvolved in formation and maintenance of cell shape
Cds size921
COG categoryM
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186057.0049915-CDS-P-wetherbeei_contig15464:462..13831683186057.0049915-CDS-P-wetherbeei_contig15464:462..1383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15464 463..1383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15464.2.1prot_P-wetherbeei_contig15464.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15464 463..1383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15464.2.1

>prot_P-wetherbeei_contig15464.2.1 ID=prot_P-wetherbeei_contig15464.2.1|Name=mRNA_P-wetherbeei_contig15464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp
MRPRIDQGGGRLAIRLQDLGQRLSFIILVLAAIFLLLAGRAETERMEVFR
TALSDFTAPLLELSSRPIQALRSGFEEVDLYFNTLEENRILRAKLERLQA
WHALALKLESENKEFRSLLNAQDVPESPFISARVIGDLGSPFVHTVLINV
GQKHGVQKGMPVIGSDGLIGQVVSAGKQVARVLLLSDLNSRVPVRLETSG
YQAVLAGDNEVQPQLFYLPARVKINIGDRIVTSGHGGVFPPDIPVGQVSS
LDSGASKNEVRIQAFSDEHRLSFVRVLQYKGHEAPPGTIGVVPMDVTSAK
DGGDVTP
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mRNA from alignment at P-wetherbeei_contig15464:463..1383+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15464.2.1 ID=mRNA_P-wetherbeei_contig15464.2.1|Name=mRNA_P-wetherbeei_contig15464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig15464:463..1383+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGCCGCGTATTGACCAAGGGGGGGGGCGACTAGCAATTCGATTGCA GGACCTTGGGCAGCGGCTGTCATTTATTATCCTTGTGCTTGCGGCGATCT TTCTATTGCTGGCAGGACGTGCGGAAACTGAGCGAATGGAAGTGTTCCGC ACCGCGCTAAGCGATTTTACTGCACCGCTTCTCGAACTTTCTTCCCGGCC AATTCAGGCGTTGCGTTCGGGGTTTGAAGAAGTTGATCTATATTTTAATA CCCTTGAAGAAAATCGTATTTTACGTGCGAAACTTGAACGGTTACAGGCC TGGCACGCACTTGCCCTAAAATTGGAAAGTGAAAACAAAGAATTCCGTTC ACTGCTGAATGCGCAGGATGTACCAGAATCTCCCTTTATCTCGGCGCGGG TTATTGGCGATTTGGGCAGCCCCTTTGTTCACACAGTGCTGATCAATGTC GGTCAAAAGCATGGCGTCCAAAAGGGAATGCCTGTTATCGGTTCTGATGG CCTGATCGGGCAGGTAGTGTCGGCGGGTAAACAGGTCGCACGTGTTTTAT TACTATCGGATTTGAACAGCCGGGTTCCCGTTCGCCTGGAGACAAGCGGG TATCAGGCTGTACTGGCCGGTGACAATGAGGTGCAGCCCCAACTGTTCTA TTTACCTGCACGCGTGAAAATAAACATTGGAGACCGTATCGTTACATCCG GGCATGGCGGTGTATTTCCACCAGATATTCCTGTGGGCCAGGTCAGCAGT CTTGATTCGGGCGCATCCAAGAATGAAGTTCGCATACAGGCATTTTCCGA TGAACATCGTCTAAGTTTTGTGCGCGTACTGCAATATAAGGGGCACGAAG CGCCTCCTGGTACAATTGGCGTCGTTCCAATGGATGTTACTTCCGCGAAG GATGGCGGTGATGTGACGCCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15464:463..1383+

>mRNA_P-wetherbeei_contig15464.2.1 ID=mRNA_P-wetherbeei_contig15464.2.1|Name=mRNA_P-wetherbeei_contig15464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig15464:463..1383+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGCCGCGTATTGACCAAGGGGGGGGGCGACTAGCAATTCGATTGCA
GGACCTTGGGCAGCGGCTGTCATTTATTATCCTTGTGCTTGCGGCGATCT
TTCTATTGCTGGCAGGACGTGCGGAAACTGAGCGAATGGAAGTGTTCCGC
ACCGCGCTAAGCGATTTTACTGCACCGCTTCTCGAACTTTCTTCCCGGCC
AATTCAGGCGTTGCGTTCGGGGTTTGAAGAAGTTGATCTATATTTTAATA
CCCTTGAAGAAAATCGTATTTTACGTGCGAAACTTGAACGGTTACAGGCC
TGGCACGCACTTGCCCTAAAATTGGAAAGTGAAAACAAAGAATTCCGTTC
ACTGCTGAATGCGCAGGATGTACCAGAATCTCCCTTTATCTCGGCGCGGG
TTATTGGCGATTTGGGCAGCCCCTTTGTTCACACAGTGCTGATCAATGTC
GGTCAAAAGCATGGCGTCCAAAAGGGAATGCCTGTTATCGGTTCTGATGG
CCTGATCGGGCAGGTAGTGTCGGCGGGTAAACAGGTCGCACGTGTTTTAT
TACTATCGGATTTGAACAGCCGGGTTCCCGTTCGCCTGGAGACAAGCGGG
TATCAGGCTGTACTGGCCGGTGACAATGAGGTGCAGCCCCAACTGTTCTA
TTTACCTGCACGCGTGAAAATAAACATTGGAGACCGTATCGTTACATCCG
GGCATGGCGGTGTATTTCCACCAGATATTCCTGTGGGCCAGGTCAGCAGT
CTTGATTCGGGCGCATCCAAGAATGAAGTTCGCATACAGGCATTTTCCGA
TGAACATCGTCTAAGTTTTGTGCGCGTACTGCAATATAAGGGGCACGAAG
CGCCTCCTGGTACAATTGGCGTCGTTCCAATGGATGTTACTTCCGCGAAG
GATGGCGGTGATGTGACGCCA
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