prot_P-wetherbeei_contig15455.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15455.1.1
Unique Nameprot_P-wetherbeei_contig15455.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length402
Homology
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: D7FIM3_ECTSI (Reelin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIM3_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 4.090e-112
Identity = 188/396 (47.47%), Postives = 254/396 (64.14%), Query Frame = 0
Query:    1 QVYVYSSNRWGYDFCDGSF---EGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRPGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVASLRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDLSRARQEEIDCSSYADGYSNERAVMGAELFVILAGLVSLFRGGYRVAQMAVVSGWEAVLPERLRRRRAKLFAADEPPPGAMDGSFALRVSRRWRLGFAAAAAAPLAAAWLWCASLLRNFFLAADVPLGRGLGGPDVT---LHFRVHVSGLFLLATVLD 390
            +VYVYS  +WG+DFC+  F        V ED FE W ++ + +SN MAS R W  + NGR  D CG  +GA  + FSGA+ R  ETLD+D+R+GG++ F ++MGP          T   A A  C+PAYGG+V+L YS DGGG W  L+ L+TF YR   F+ VEV++P      + RFR+ Q++F NA EYWALDDVRV++     W+    F S V  E E  RE+ CC+NS+QCDLS+ RQE +DC++Y     NERA++GAELFV+LAGLV+L R  YR  +  V+ GWE  +P  LR++RAK+F AD+P PG+M+  F L V+ RW+  F A    PL   WL+CA+LLRNF+L  ++ L      PDV+   +  +VHVSGLF+LAT +D
Sbjct:  367 EVYVYSDEKWGFDFCEEEFMSGSAGAYVFEDTFEMW-DAENLSSNTMASAR-WDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGP----------TVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKEAFTEVEVDVPSTLNAASVRFRWKQENFENALEYWALDDVRVLSYFAEGWRETAAFESTVDVEHETLREIRCCLNSEQCDLSKNRQEAVDCAAYITETLNERALLGAELFVLLAGLVTLARSLYRTGEGMVLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFYLVEELTLL-----PDVSPQSVRVKVHVSGLFILATFID 745          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A836CJ23_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ23_9STRA)

HSP 1 Score: 240 bits (613), Expect = 7.620e-68
Identity = 138/341 (40.47%), Postives = 191/341 (56.01%), Query Frame = 0
Query:   64 ASSGAAALFFSGA-DH-RSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVASLRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDLSRARQEEIDCSSYADGYSNERAVMGAELFVILAGLVSLFRGGYRVAQMAVVSGWEAVLPERLRRRRAKLFAADEPPPGAMDGSFALRVSRRWRLGFAAAAAAPLAAAWLWCASLLRNFFLAADVPLGRGLGGPDVTLHFRVHVSGLFLLATVLDALTAAAVGRCVV 402
            A+  A     SGA DH  +  T   +VR+   L+FW +MGP                AA C+PAYGG+V++ +S +G                                          ++F++  E+WALDDVRVV++  P W     F ++ A +     ++ CCMNS+QC LS+A QE +DC+ +A    NERA++GAE FV++A + +L R  Y  AQ  V+ GW  +LPE+LR ++AKLF AD+PPPG MD  FAL+VS+ WR+ F  A  APL   WLWCASLLRNF+L  ++ +G GL  P + L FRVHVSG+FL+AT+LD L    + R VV
Sbjct:  384 ATDAATNAMLSGAWDHVTNGPTTKFEVRFVPPLQFWFKMGPPTDDPL----------AAACKPAYGGNVYIYFSTEG------------------------------------------ENFQDLLEHWALDDVRVVSAFAPQWHDGAAFRAQAAGDDATLAQIKCCMNSEQCSLSKAEQEAVDCAKFASESGNERAILGAERFVLIAAVAALIRWIYATAQAVVLRGWTQLLPEKLRPKQAKLFMADDPPPGIMDSQFALQVSQVWRITFMVANGAPLVLLWLWCASLLRNFYLVEEITVGAGLPHPWL-LVFRVHVSGVFLIATLLDGLAVYTLAREVV 671          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A482SZW4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZW4_9ARCH)

HSP 1 Score: 153 bits (387), Expect = 5.080e-37
Identity = 101/284 (35.56%), Postives = 145/284 (51.06%), Query Frame = 0
Query:    2 VYVYSSNRWGYDFCDGSFEGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRPGDGCGASS---GAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAAT--CRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVASLRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDLSRARQEEIDCSSYADGYSNERAVMG-AELFVILAGLVSLFRGGY 279
            +Y  S  + GYD C  SF   + V ED FE WQ  ++P+SN M S   W  + N +    CGA     G  +L F G   R+AET DLDV  GG+LEF L + P            +  DA    C+  Y G+V + +S D G NW  L      LYR + FS   ++LP  A++P TRFRF Q  F    + WALD+VRV+  L  +W+ N  +   V   +E  ++  CC ++D C+   A  ++  CS +A  YS  R +   +E+ ++LA L+ + R  Y
Sbjct:  139 LYHQSGRKLGYDICKDSFNEGIYVFEDTFEHWQVLTNPSSNLMVSAH-WLNVTNAQSDSYCGAGEVFGGKKSLRFGGEFMRAAETEDLDVERGGKLEFELFLPP------------IGFDAFNPFCKTGYIGTVLVDFSVDSGQNWITLARYDPALYRRDQFSLFSLQLPPEASSPHTRFRFYQPVFEALRDNWALDNVRVLRVLPLNWQTNGGYRENVRAGREEVQKGQCCADTDWCNKRLAEDDKEGCSDFA-WYSQGRYLFRLSEVLLMLAVLIVVLRFFY 408          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: B8LBY0_THAPS (Reelin n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBY0_THAPS)

HSP 1 Score: 130 bits (327), Expect = 3.720e-29
Identity = 87/274 (31.75%), Postives = 128/274 (46.72%), Query Frame = 0
Query:    1 QVYVYSSNRWGYDFCDGSFE----------------------GAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRPGDGCG----------------ASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVASLRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDL 236
            ++YV+S++  GYD C  S                          V V +DDFE       P   A A    W  IVNG   D CG                A+    AL F+G   R A T+ L+V  GGR+EF ++MG    +  D        + +TC+ AYGG V L YS   G  W  + T++ + YRG+ F  +  ++P GA + +T FRF Q+ F    ++WA+DDVR+ A+ +P W+ +  F  R   + E  + + CC N+DQC +
Sbjct:  314 ELYVFSNHTLGYDTCISSPRDEATRTKIITAPHPLLLLSDNLAGVYVFDDDFEL------PPRLASAP---WHEIVNGHYSDACGVNLKEPPERGNHAGYKAAKNENALVFTGVYKRQAATVGLNVEHGGRVEFHIKMG---AITND--------EFSTCKTAYGGDVTLEYSVSSG-EWIVMATMEVWKYRGHIFQFISHDIPIGARSNSTSFRFRQESFNALRDHWAIDDVRIRANFKPQWQHSIDFAQRQTIQDEDVKRMQCCYNTDQCSV 566          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A7S1G2W0_9STRA (Reelin (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G2W0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.080e-21
Identity = 83/322 (25.78%), Postives = 135/322 (41.93%), Query Frame = 0
Query:    2 VYVYSSNRWGYDFCDGSFEGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRPGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVASLRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDLSRARQEEIDCSSYADGYSN--ERAVMGAELFVILAGLVSLFRGG---YRVAQMAVVSGWEAVLPERLRRRRAKLFAADEPPPGAMDG 318
             Y Y+    G D+    F  A  ++ + F          +N+  + + W           CG   G  A+ F G + R AET+D DVR+GG +EF L  G   V                C     G V L+YS DGG  W +  T     YR  +++ V   LP  A+TPATRF++ QK+F    + +A+D++++ A+L   W ++D F ++ A   E  R   CC+  + C       +   C +   G+    +   M  E+ +    ++S        + V+Q   ++G    L     R++A     +  PP    G
Sbjct:  217 TYDYAGGLLGVDWELDGFYPAEILMHEHF----------ANSTPNAKYWGNQSGNVMSTTCGTVRGPVAMRFRGPNPRFAETVDFDVRYGGEIEFHLAYGRGQV---------------GCASLEQGPVTLAYSTDGGEYWEDFVTYDRNTYRVENYTHVRHVLPANASTPATRFKWYQKEFWELFDVFAIDEIKIFANLPKTWNSSDYFHTKAAALHERNRLDECCLGCNLCPAPHEIDDPEACDA-TPGFMGLPDHTAMEHEMILFFTCILSTVFACLECWSVSQRLALAGMMGALQPLFNRKKA-----ESAPPSVASG 507          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A6H5KNS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.670e-15
Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 0
Query:    1 QVYVYSSNRWGYDFCDGSF---EGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRPGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGR 93
            +VYVYS  +WG+DFC+  F        V ED FE W ++ + +SN MAS R W  + NGR  D CG  +GA  + FSGA+ R  ETLD+D+R G R
Sbjct:  248 EVYVYSDEKWGFDFCEEEFMSGSAGAYVFEDTFEMW-DTENVSSNTMASAR-WDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRSGIR 341          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A7K7WEL0_9AVES (Reelin (Fragment) n=5 Tax=Aves TaxID=8782 RepID=A0A7K7WEL0_9AVES)

HSP 1 Score: 66.2 bits (160), Expect = 6.630e-8
Identity = 55/194 (28.35%), Postives = 86/194 (44.33%), Query Frame = 0
Query:   15 CDGSFEGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNG---RPGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRP--AYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSA---VEVELPGGAATPATRFRFVQKDFRNAD-EYWALDDVRVVA 199
            CD  F G     E+       S       + +   W  ++ G   +P +GCG  S  ++L+F+ A  R   + DLD  W   ++F++++G                D+ +C    +    V L YS +GG  W  L  +       +DFS    V +ELP GA TP TRFR+ Q  F     + WALDD+ +++
Sbjct:  799 CDSGFRGTECQPENPLPSTVMSDFETPGGLKT--EWQEVIGGEIVKPEEGCGVISSGSSLYFNKAGKRQLVSWDLDTTWVDFVQFYIQIG---------------GDSPSCNAPDSREEGVLLQYSNNGGITWQLLAEMYF-----SDFSKPRFVYLELPAGAKTPCTRFRWWQPVFSGEGYDQWALDDIIILS 970          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: UPI001BB1A7E6 (reelin-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1A7E6)

HSP 1 Score: 58.9 bits (141), Expect = 1.420e-5
Identity = 64/197 (32.49%), Postives = 87/197 (44.16%), Query Frame = 0
Query:   15 CDGSFEGAVRVLEDDFERWQNSSDPASNAMASGRLWSAIVNGRP----GDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGS--VHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEY---WALDDVRVVASLR 202
            CD  + GA   L DD  R         +A A    W+ I+ G      G GCG  S   +L+F G   R   + D+       ++F++ +G      +D   +A       CR A   S  V L YS DGG +W +L  L    Y    F  V  ELP GA +PATRFR+ Q   R+A  Y   WA+DD+ +    R
Sbjct: 1042 CDRGYSGA-NCLPDD-PRLNAIQSNFEDASAINADWT-IIQGASIKCTGHGCGTVSSGCSLYFHGPGVRQLVSHDMSTVEPSYIQFYIEIG------SDEGRSA-------CRRATERSEGVLLQYSIDGGVSWVDLLELYYQDYTMPRF--VRKELPPGAQSPATRFRWRQP--RHAGAYTSQWAIDDIFIGNDFR 1218          
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Match: A0A7M7PR13_STRPU (Reelin n=2 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PR13_STRPU)

HSP 1 Score: 58.9 bits (141), Expect = 1.420e-5
Identity = 60/194 (30.93%), Postives = 82/194 (42.27%), Query Frame = 0
Query:   15 CDGSFEGAVRVLEDD--FERWQNSSDPASNAMASGRLWSAIVNGR---PGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRMGPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQTFLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNA-DEYWALDDVRVVASLR 202
            CD  + G V  L D+      Q++ + A+   A    WS I        G GCG  S   +L+F G   R   + D+       ++F++R+G      A + AT  A             V L YS DGG  W  L  L    Y    F  V  ELP GA +PATRFR+ Q     A +  WA+DD+ +    R
Sbjct: 1054 CDRGYSG-VSCLPDNPRLNAIQSNFEEAATINAD---WSTIQGATIKCTGHGCGTISSGCSLYFHGPGVRQLVSHDMSTVEPSYIQFYIRIGSDEERSACSRATERAEG-----------VLLQYSTDGGITWLHLLELYYQDYTMPRF--VRKELPAGAQSPATRFRWRQPHHAGAFNSQWAVDDIFIGNDFR 1230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15455.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FIM3_ECTSI4.090e-11247.47Reelin n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A836CJ23_9STRA7.620e-6840.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A482SZW4_9ARCH5.080e-3735.56Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
B8LBY0_THAPS3.720e-2931.75Reelin n=1 Tax=Thalassiosira pseudonana TaxID=3512... [more]
A0A7S1G2W0_9STRA1.080e-2125.78Reelin (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 ... [more]
A0A6H5KNS6_9PHAE3.670e-1546.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7K7WEL0_9AVES6.630e-828.35Reelin (Fragment) n=5 Tax=Aves TaxID=8782 RepID=A0... [more]
UPI001BB1A7E61.420e-532.49reelin-like n=1 Tax=Lytechinus variegatus TaxID=76... [more]
A0A7M7PR13_STRPU1.420e-530.93Reelin n=2 Tax=Strongylocentrotus purpuratus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.260coord: 26..200
e-value: 2.9E-30
score: 107.1
IPR034968ReelinPANTHERPTHR11841REELINcoord: 47..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15455contigP-wetherbeei_contig15455:399..1604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15455.1.1mRNA_P-wetherbeei_contig15455.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15455 399..1604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15455.1.1 ID=prot_P-wetherbeei_contig15455.1.1|Name=mRNA_P-wetherbeei_contig15455.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=402bp
QVYVYSSNRWGYDFCDGSFEGAVRVLEDDFERWQNSSDPASNAMASGRLW
SAIVNGRPGDGCGASSGAAALFFSGADHRSAETLDLDVRWGGRLEFWLRM
GPAAVVMADAAATAVAADAATCRPAYGGSVHLSYSADGGGNWTELTTLQT
FLYRGNDFSAVEVELPGGAATPATRFRFVQKDFRNADEYWALDDVRVVAS
LRPDWKANDTFVSRVATEQEIAREVACCMNSDQCDLSRARQEEIDCSSYA
DGYSNERAVMGAELFVILAGLVSLFRGGYRVAQMAVVSGWEAVLPERLRR
RRAKLFAADEPPPGAMDGSFALRVSRRWRLGFAAAAAAPLAAAWLWCASL
LRNFFLAADVPLGRGLGGPDVTLHFRVHVSGLFLLATVLDALTAAAVGRC
VV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034968Reelin