prot_P-wetherbeei_contig1545.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1545.1.1
Unique Nameprot_P-wetherbeei_contig1545.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length355
Homology
BLAST of mRNA_P-wetherbeei_contig1545.1.1 vs. uniprot
Match: A0A8J8P076_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P076_HALGN)

HSP 1 Score: 66.6 bits (161), Expect = 2.700e-8
Identity = 56/212 (26.42%), Postives = 108/212 (50.94%), Query Frame = 0
Query:   27 APDGASSSEARALVSKAYMLLVHMKPSSRTINVAIEDLKQAVLAKKSQLEEEDLSLQSLLREKLYLERELVLCRKFPMPNLRRA-----EAEEGRPILEGTDAVQTPEQHQVRLETLQKQMQQRRALQEQQRLLRAQLDDSVNLIGEQQQFIERIPSLLADVETSTLPLQKYFKLKLSAGRDRLRVAADLPVPLHTLFGLLDAYCRVHPESG 233
            A D   + + + L  +  M L+ ++   R+I   +E +K+    ++  L++ +L+LQSLL  K +  +E+  C+++  PNL++A      AE  R I     A  T ++       L +Q+++R  L ++ R    +     +   ++Q+ +E  P  L  +E +T+P+Q++   KLS  R     + +LP+PL+T+F  L  +   HP+ G
Sbjct:   55 AGDPTIAQQVKELDVRTKMRLLVIRSGQRSIFQMVEHMKRQSEDERRNLDQHNLTLQSLLYGKDFFLKEVHQCKEYKTPNLQQALTPEIYAERFRNIA----ANITEQERSENFGYLAQQLKERELLTKKLRETEGERSSMEHEFVKRQRVLEEFPQTLEKLEKATVPIQQHLGQKLSEERQLFLKSENLPLPLNTVFRKLYQFQNQHPQFG 262          
BLAST of mRNA_P-wetherbeei_contig1545.1.1 vs. uniprot
Match: UPI00053CA818 (THO complex subunit 5B isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA818)

HSP 1 Score: 61.2 bits (147), Expect = 1.490e-6
Identity = 81/375 (21.60%), Postives = 167/375 (44.53%), Query Frame = 0
Query:    2 DKAAIQTFDEATRALHDTIVLLGRTAPDGASSSEARALVSKAYMLLVHMKPSSRTINVAIEDLKQAVLAKKSQLEEEDLSLQSLLREKLYLERELVLCRKFPM--PNLRRAEAEEGRPILEGTDAVQTPE-----QHQVRLETLQKQMQQRRALQEQQRLLRAQLDDSVNLIGEQQQFIERIPSLLADVETSTLPLQKYFKLKLSAGRDRLRVAADLPVPLHTLFGLLDAYCRVHPESGSVQTVPAVQWDGKSGDAAAGSEKALKRRKVEEVAVPGDVAAAVASEILRCSPTAVELSLRMGGSGXXXXXXXXXAC-----------PEATALPV-RFQHLPELDLVVVAAPPQFP----NLLVNLFPDDTGVEPP 353
            +K+  +   E+  ++ + I  +     +G S SE R L+++ ++  V+++ ++R+I +  + +K      K+ ++   L L +L+ EK +  + +  CR F    P++     EE     +  ++++ P       H + L+ L  ++ QR+ L + +  L  Q    +  I E+++F+  +PS L  ++ ++LP+Q    L+ +    +  +A  LP PL+ ++  L A      ES  ++ V +++ D +S      ++        E   +  D  A              ++S + G                         P++  L + +F+ L +L+LV V+          ++L NLFPDDTG+EPP
Sbjct:   34 EKSPHELLRESKNSVEEIIAKMLSNKREGKSKSEIRDLLTQMFLNFVNLRQANRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACRDFKSKYPDIELVPEEEF--FRDAPESIKGPSLSDDGSHDLMLKRLNFELHQRKELCKFRARLEQQKKSLLETIAERKKFLSSLPSHLKSLKKASLPVQSQLGLQHTKKLKQHHLAELLPPPLYVIYSQLFAQKEAFDESIDLEIVGSLK-DAQSYARQQANKDPGMTNNTESTRLEDD-GADXXXXXXXXXXRPKKISSKEGSDQAGLYQVHPLKILLHVYDDEIPDPKSRKLVMLKFEFLLKLNLVCVSTEGSQDGSENDILCNLFPDDTGLEPP 404          
BLAST of mRNA_P-wetherbeei_contig1545.1.1 vs. uniprot
Match: A0A7S0RYS0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RYS0_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 2.530e-6
Identity = 83/337 (24.63%), Postives = 150/337 (44.51%), Query Frame = 0
Query:   29 DGASSSEARALVSKAYMLLVHMKPSSRTINVAIEDLKQAVLAKKSQLEEEDLSLQSLLREKLYLERELVLCRKFPMPNLRRA----EAEEGRPILEGTDAVQTPE--------QHQVRLETLQKQMQQRRALQEQQRLLRAQLDDSVNLIGEQQQFIERIPSLLADVETSTLPLQKYFKLKLSAGRDRLRVAADLPVPLHTLFGLLDAYCRVHPESGSVQTVPAV-QWDGKSGDAAAGSEKALKRRKVEEVAVPGDVAAA--VASEILRCSPTAVELSLRMGGSGXXXXXXXXXACPEATALPVRFQHLPELDLVVV-AAPPQFPNLLVNLFPDDTG 349
            DGA   E R + S   + L+ +K +++     +E++K+     K+ LE+ DL+LQ+LL EK Y E+E++ CR F       A     AEE    L  +   Q  +        +H++    L  + +QR+AL +Q   L+      ++ +G++++ ++ + + L  +  S+ PL        +      R A  LP PL+ ++  + A         S     +V + +  + + AA +    K  K    A     AA+   + ++ +  P +VE+ +    +          +   A A+ V FQ+LP L +V V  A P   ++L  LFP D G
Sbjct:   26 DGA---EVRHMASDGLLKLLAVKDANKRQCFQVEEMKEETTRSKAALEKADLTLQNLLYEKQYYEKEILSCRSFQSKVKDEAVALMPAEECLASLASSSDAQDRDLHAKALTSEHELMKARLLHENKQRKALVKQLDQLKQMKQTLLSNVGQKERVLKDLQAQLKTLADSSKPLAAVLTPTANLRGGMNRTADLLPTPLYVIYSQVVAAREAMSVGCSASISGSVDEAESYARNIAAETLDDAKAAKSGADAQASQPAASKPASEDLYKAHPLSVEVEVYKESA-----VSSTASKQPAAAITVVFQYLPALRVVTVHCANPSDNSVLRGLFPGDDG 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1545.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A8J8P076_HALGN2.700e-826.42Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
UPI00053CA8181.490e-621.60THO complex subunit 5B isoform X1 n=2 Tax=Tarenaya... [more]
A0A7S0RYS0_9CHLO2.530e-624.63Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availablePANTHERPTHR13375:SF3THO COMPLEX SUBUNIT 5 HOMOLOGcoord: 18..353
IPR019163THO complex, subunit 5PFAMPF09766FmiP_Thoc5coord: 50..353
e-value: 3.1E-35
score: 122.2
IPR019163THO complex, subunit 5PANTHERPTHR13375FMS INTERACTING PROTEINcoord: 18..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1545contigP-wetherbeei_contig1545:363..3048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1545.1.1mRNA_P-wetherbeei_contig1545.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1545 363..3053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1545.1.1 ID=prot_P-wetherbeei_contig1545.1.1|Name=mRNA_P-wetherbeei_contig1545.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=355bp
MDKAAIQTFDEATRALHDTIVLLGRTAPDGASSSEARALVSKAYMLLVHM
KPSSRTINVAIEDLKQAVLAKKSQLEEEDLSLQSLLREKLYLERELVLCR
KFPMPNLRRAEAEEGRPILEGTDAVQTPEQHQVRLETLQKQMQQRRALQE
QQRLLRAQLDDSVNLIGEQQQFIERIPSLLADVETSTLPLQKYFKLKLSA
GRDRLRVAADLPVPLHTLFGLLDAYCRVHPESGSVQTVPAVQWDGKSGDA
AAGSEKALKRRKVEEVAVPGDVAAAVASEILRCSPTAVELSLRMGGSGGG
NGGGNGGACPEATALPVRFQHLPELDLVVVAAPPQFPNLLVNLFPDDTGV
EPPPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019163THO_Thoc5