prot_P-wetherbeei_contig154.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig154.5.1
Unique Nameprot_P-wetherbeei_contig154.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length458
Homology
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: A0A0P1AIP3_PLAHL (Ribonuclease H-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP3_PLAHL)

HSP 1 Score: 127 bits (319), Expect = 5.080e-29
Identity = 74/215 (34.42%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   12 LSDLVYAWVLQVFREFNIDMKKHVFAATTDGGSDIRRCCAKLCPS-LWEWCIPHLLNCACVQAFGSSLDPRKGMADNDLARTVINAVRKVFESINKSKNKTAFASIQQRIFAGKPIKLINAQPQRWVGTAAVLQRVLELWPALELFYLEVCQKAFPLTDYKAEILELYSLLFPVAAIIKHCQSVQYPTGASGFLMVALLQLDELDVHGPLTIIVP 225
            LS+++Y+WV+ V  EF + +   +  +T+DGG DIRR  +KL  +  WEWC+PHL NCA  +++G++LDP K    N   R  +  +R V E +NKS               GK   +I+  P R++    V +R LELW  ++ +Y E  + + P+   K E+ +LYSL+ PV A+++  Q    P+GA   + +A  QL+ +     L +I P
Sbjct:  186 LSEVLYSWVIDVLAEFGL-LPSDIAGSTSDGGGDIRRLLSKLLTAAFWEWCVPHLSNCALQESYGANLDPSK--IGNIECRETLQTMRSVIEHLNKSPQ-------------GKQ-PVISHAPHRFLSLTKVNERFLELWDPIDKYYNERSKLSNPMLSLKEELRQLYSLIVPVGALMQETQGCSKPSGALALVGLADPQLNTMSAAALLQVIRP 383          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.180e-22
Identity = 79/230 (34.35%), Postives = 114/230 (49.57%), Query Frame = 0
Query:    2 PDPDVLARDRLSDLVYAWVLQVFREFNIDMKKHVFAATTDGGSDIRRCCAKLC----PSLWEWCIPHLLNCACVQAFGSSLDPRKGMADNDLARTVINAVRKVFESINKS---KNKTAFASIQQRIFAGKPIKLINAQPQRWVGTAAVLQRVLELWPALELFYLEVCQKAFPLT--DYKAEILELYSLLFPVAAIIKHCQSVQYPTGASGFLMVALLQLDELDVHGPLTI 222
            P   V A  + S++++     V REF + +   +   TTD GSD++  C           W+WC+ HL + A  QAFG+S DP+K    N  AR V+  V K    +N+S   K K   A +Q     G+ +K+    PQRW+    V++R++ LW  L   Y     + FPL   D K  IL+LYSLL P+AAI +  Q    P  A   +  A L+ + LD  GPL +
Sbjct:  282 PSAAVQATGKASEILFNVFNSVLREFGVKISD-LAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQK--PKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQM---TGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVE-FPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKV 504          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 5.500e-15
Identity = 41/106 (38.68%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    2 PDPDVLARDRLSDLVYAWVLQVFREFNIDMKKHVFAATTDGGSDIRRCCAKLCPSLWEWCIPHLLNCACVQAFGSSLDPRKGMADNDLARTVINAVRKVFESINKS 107
            P  ++L    LSD++  W  ++  EFN+   K + ++T+D GSD++R C+ L P  WEWC+PH+LNC  V AFG+ L+       N+ AR ++  ++KV   +NKS
Sbjct:  129 PSGNLLPGRSLSDILQLWTNKIILEFNVSYDK-ILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLVGAFGTGLNCVN--IRNNGARRLLKDLKKVIRHVNKS 231          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: A0A2V3IPY4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPY4_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 4.140e-11
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 0
Query:    6 VLARDRLSDLVYAWVLQVFREFNIDMKKHVFAATTDGGSDIRRCCAKLCPSLWEWCIPHLLNCACVQAFGSSLDPRKGMADNDLARTVINAVRKVFESINKSKNKTAFASIQQRIFAGKPIKLINAQPQRWVGTAAVLQRVLEL 149
            +L   RLS +++    +   +F ++   +V ++ +D GS ++R  +KL P  W WC+ HLLNCA V+AFG+S+      + +   R  +  ++K+ E I KS +        Q     K +KL +    RW  T  +LQ+ L+L
Sbjct:  259 LLESGRLSGVLHLCYNKELMDFEVE-PNNVMSSVSDSGSTVKRLGSKLLPGYWNWCMSHLLNCALVEAFGTSIPSWNVQSQS--TRNFLKDLKKIVEHIIKSSSMRKRFEEGQYEATKKNLKLFSDVSHRWFSTVPLLQQFLKL 399          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.880e-7
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  274 AAETREKLCDAMQHRLFDPRYKLGCSSDKTGVGSSDLVYEQAMYLHPDLCDLRFVDKLASSAAYAETVKARIRNAILA 351
            A  TR+ +C+++  R FD RYK   S D      +D V++  M LHP   DLR+VDKLAS++A+A  VK+ I + +++
Sbjct:  232 ARGTRQHMCESVDWRWFDKRYKSAKSQD------TDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVIS 303          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: W3A368_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W3A368_PHYPR)

HSP 1 Score: 58.2 bits (139), Expect = 2.090e-6
Identity = 47/156 (30.13%), Postives = 76/156 (48.72%), Query Frame = 0
Query:   58 WEWCIPHLLNCACVQAFGSSLDPR--KGMADNDLARTVINAVRKVFESINKSKNKTAFASIQQRIFAG--KPIKLINAQPQRWVGTAAVLQRVLELWPALELFYLE----------VCQKAFPLTDYKAEILELYSLLFPVAAIIKHCQSVQYPTG 199
            W W IPH ++ A   AFG   D    K  A  DL   V   V+ V+++ +     T F+ +   +        +L+N +  R++G A V++R++ LW  L  +Y E          V   AFPLT  K +++++ SLL P+A +   C+  QY +G
Sbjct:    9 WTWRIPHFMHAATKTAFGIVADSNRSKNPAMTDLLWRV---VKTVYQTQHVEVMGTLFSELCSLLTDDDVNARQLLNFRIHRFLGLARVVRRIVLLWDPLLTWYEEGIARARRDNGVPPAAFPLTQDKMDLIQILSLLEPIATV---CKIGQYESG 158          
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Match: W2QQF5_PHYPN (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QQF5_PHYPN)

HSP 1 Score: 56.2 bits (134), Expect = 7.460e-5
Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = 0
Query:   58 WEWCIPHLLNCACVQAFGSSLDPR--KGMADNDLARTVINAVRKVFESINKSKNKTAFASIQQRIFAG--KPIKLINAQPQRWVGTAAVLQRVLELWPALELFYLE----------VCQKAFPLTDYKAEILELYSLLFPVAAIIKHCQSVQYPTGASGFLMVAL--LQLDELDVHGPL 220
            W W IPH ++ A   AFG   D    K  A  DL   V   V+ V+++ +     T F+ +   +        +L+N +  R++G A V++R++ LW  L  +Y            V   AFPLT  K +++++ SLL P+A +   C+  QY +     +++ L  L++  LD   PL
Sbjct:   10 WTWRIPHFMHAATKTAFGIVADSNRSKNPAMTDLLWRV---VKTVYQTQHVEVMGTLFSELCSLLTDDDVNARQLLNFRIHRFLGLARVVRRIVLLWDPLLTWYEARIARARRDNGVPPAAFPLTQDKMDLIQILSLLEPIATV---CKIGQYESENQCNVLLGLFKLRISVLDNTAPL 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig154.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A0P1AIP3_PLAHL5.080e-2934.42Ribonuclease H-like domain n=1 Tax=Plasmopara hals... [more]
A0A6H5L1G0_9PHAE5.180e-2234.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3ILY8_9FLOR5.500e-1538.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPY4_9FLOR4.140e-1130.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6H5JNY1_9PHAE3.880e-741.03Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
W3A368_PHYPR2.090e-630.13Uncharacterized protein n=4 Tax=Phytophthora paras... [more]
W2QQF5_PHYPN7.460e-528.49Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 14..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig154contigP-wetherbeei_contig154:6332..7705 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig154.5.1mRNA_P-wetherbeei_contig154.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig154 5793..9137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig154.5.1 ID=prot_P-wetherbeei_contig154.5.1|Name=mRNA_P-wetherbeei_contig154.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=458bp
MPDPDVLARDRLSDLVYAWVLQVFREFNIDMKKHVFAATTDGGSDIRRCC
AKLCPSLWEWCIPHLLNCACVQAFGSSLDPRKGMADNDLARTVINAVRKV
FESINKSKNKTAFASIQQRIFAGKPIKLINAQPQRWVGTAAVLQRVLELW
PALELFYLEVCQKAFPLTDYKAEILELYSLLFPVAAIIKHCQSVQYPTGA
SGFLMVALLQLDELDVHGPLTIIVPKRKGIIEGGPKDTAARNAVSRAEIL
PVEYYEDVERRLLLCNATDLCVTAAETREKLCDAMQHRLFDPRYKLGCSS
DKTGVGSSDLVYEQAMYLHPDLCDLRFVDKLASSAAYAETVKARIRNAIL
AQRADHGHHWAAGGGGGAAGGCCGGGDGLIPGTAAAVSGGTGGGPTRRHD
YLVLRARWEKPCGGARQQQIYPQRGTAWRTPCRDAAAAPCVSSRPAVFRG
GGTAEAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf