mRNA_P-wetherbeei_contig15383.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH) HSP 1 Score: 184 bits (468), Expect = 9.460e-50 Identity = 100/168 (59.52%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 504
VANKL WS IGRLR+++ P++ D + AGRILCDTYK+A+EFLR ETTYSL++LA+ QL +RA+VDP DVPR F+ A I+ LA T DA LVQ LMFKLQV+PLTKQLT I+GNLWS T +G RA+RI++LLLHEFH+LK++ PE R F+D K+
Sbjct: 540 VANKLPNWSLIGRLRKSKEPKSINDRD-------VTAGRILCDTYKAAKEFLR-ETTYSLTYLASSQLKKERAEVDPIDVPRYFST-ANDIIGLAWHTYRDAWLVQGLMFKLQVVPLTKQLTCISGNLWSRTIKGARAERIEYLLLHEFHSLKYILPE-RKFQDNSKN 697
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.010e-43 Identity = 92/161 (57.14%), Postives = 115/161 (71.43%), Query Frame = 1
Query: 10 KLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQ--RADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAF 486
K+ W KIGRLRR + P G + ++ + AGR++ DTY +A+E LR ETTYSL HLA QL RA +DP VP F + A IV LAQ TAFDA LVQRL +LQ++PLTKQLTNI+GNLW+ T +G RA+RI++LLLHEFH LK+VTPE+RAF
Sbjct: 733 KVSVWHKIGRLRRAKFPNPKG-LARDINLFGLTAGRLMADTYLTAREHLR-ETTYSLGHLATTQLRLPHPRAQIDPLQVPSFFGS-AKLIVNLAQHTAFDAQLVQRLCLRLQLVPLTKQLTNISGNLWARTIKGNRAERIEYLLLHEFHNLKYVTPERRAF 890
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S1YR22_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YR22_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.270e-43 Identity = 88/169 (52.07%), Postives = 112/169 (66.27%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTRPP-----RAFGDVGKESFHTA-IAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFK 489
V K+ WSK+GR RRT P +F G E++ +GR++CDTY S+QE LR ETTYSL +LA QL R +++ DVP+ F IV LA+ T FDA LVQRLMFKLQV+PLTKQLT I GNLW T +G RA+R ++LLLHEFH K++ PE+R +K
Sbjct: 94 VETKVMIWSKLGRRRRTALPSISYLNSFKKGGGENYALVETLSGRLVCDTYVSSQELLR-ETTYSLQNLAMTQLKTNRVEIEQVDVPQWFDKSVN-IVNLAKHTLFDAQLVQRLMFKLQVLPLTKQLTCIAGNLWMRTLKGQRAERNEYLLLHEFHGRKYIVPERRNYK 260
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA) HSP 1 Score: 165 bits (418), Expect = 5.050e-43 Identity = 96/170 (56.47%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 504
V K+G WSKIGR R+ R P A FG+ GKE GRILCDTY SA+EFLR ETTYSL++LA+ QL R +++ VP G V+LAQ T DA LVQ LMFKLQV+PLTKQLTNI GNLW T +G RA+R ++LLLHEFH LK++ PEKR K + +D
Sbjct: 729 VELKVGMWSKIGRRRQMRLPPASQFGN-GKEWAIANALDGRILCDTYLSAKEFLR-ETTYSLTNLASTQLKFAREEIEQESVPEFCKTGTN-FVKLAQHTLNDAQLVQNLMFKLQVLPLTKQLTNIAGNLWGRTMKGNRAERNEYLLLHEFHQLKYLVPEKRTAKQRLED 895
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS) HSP 1 Score: 162 bits (411), Expect = 4.160e-42 Identity = 93/170 (54.71%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 504
V K+ WSKIGR R+ + P A FG+ GKE GRILCDT SA+E LR ETTYSL++L QL QR +++P DVP+ G V LAQ T DA LVQRLMFKLQ++PLTKQLTNI GNLW+ T +G RA+R ++LLLHEFH LK++ PEKR K + ++
Sbjct: 321 VELKVSMWSKIGRRRQMKLPNATQFGN-GKEWAIANALDGRILCDTCISAKELLR-ETTYSLTNLTLTQLKMQRVEIEPVDVPKWCRDGK-HFVSLAQHTLNDAQLVQRLMFKLQILPLTKQLTNIAGNLWARTMKGNRAERNEYLLLHEFHNLKYLVPEKRTAKQRSEE 487
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S3P4V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4V5_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.060e-41 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRA 483
A+KL +WS++GR R+T P+ G + + A+ GR+LCDTY SA+E LR ETTYSL+ LAA QL R +++ D+P FA G + + T DA LVQ+L FKLQ +PLTKQLTNI GNLWS T + RA+R ++LLLHEFH LK++ PEK+A
Sbjct: 66 AAHKLKSWSQMGRRRQTALPK--GPIKDWAIAQAMT-GRLLCDTYLSAKELLR-ETTYSLTALAASQLQTARPEIESVDLPLYFATAKG-VTDVCHSTLLDAQLVQKLAFKLQTLPLTKQLTNIAGNLWSHTLKSNRAERTEYLLLHEFHRLKYLPPEKKA 221
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S1UP17_9STRA (DNA polymerase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UP17_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.580e-41 Identity = 86/168 (51.19%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEK 501
V K+ WSK+GR R+T+ PP + GK+ GR+LCDTY SA++ LR ETTYSL++LAA QL R D++P D+P+ F IV LA+ T DA LVQRL+FKLQ++PLTKQLT + GNLW T +G RA+R ++LLLHEFH+LK++ PEK+ +K++
Sbjct: 341 VELKVPLWSKVGRRRKTKLPPLSHFASGKDWAIADAIQGRLLCDTYLSAKDLLR-ETTYSLTNLAATQLKTLRQDIEPQDIPQWFHTSK-DIVHLARHTLHDAELVQRLLFKLQILPLTKQLTCVAGNLWGRTLKGNRAERNEYLLLHEFHSLKYLPPEKKRKGEKQE 506
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S4IIV6_9STRA (DNA polymerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IIV6_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.030e-41 Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 10 KLGTWSKIGRLRRTRPPRA--FGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDK 495
K+ WSKIGRLR T P+ F GK+ GRIL DTY SA+E LR ETTYSL +LA QL + D+DP DVPR F + + I+ LA+ T DA LVQ+LMFKLQV+PLTKQLT I GNLWS T +G RA+R ++LLLHEFH LK++ PEK ++K
Sbjct: 604 KVKLWSKIGRLRNTTLPKPSQFHGNGKDWAVGNALRGRILADTYLSAKELLR-ETTYSLKNLAKSQLKTFKEDIDPVDVPRWFNSSS-DIISLAKHTLRDAELVQKLMFKLQVLPLTKQLTCIAGNLWSHTVKGNRAERNEYLLLHEFHQLKYIVPEKERSRNK 765
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A7S4EF44_9STRA (DNA polymerase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF44_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.170e-41 Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKD 492
+ +K+ WSK GR R+T P + + GK+ +GR+LCDTY SAQE L ETTYSL++LA QL R +++P D P+ F IV LA+ T DA LVQRLMFKLQ++PL+KQLTNI GNLWS T + RA R ++LLLHEFH LKFV PEKR K+
Sbjct: 819 IEHKVRMWSKFGRQRQTDLPSKTYFSNGKDWAIARAISGRLLCDTYLSAQEHLN-ETTYSLTNLAKTQLKTDRREIEPMDTPQYFHKSE-TIVALARHTLNDAQLVQRLMFKLQILPLSKQLTNIAGNLWSQTLKSNRAGRTEYLLLHEFHRLKFVVPEKRQGKN 981
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Match: A0A448Z9Q9_9STRA (DNA-directed DNA polymerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9Q9_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.300e-41 Identity = 89/169 (52.66%), Postives = 114/169 (67.46%), Query Frame = 1
Query: 1 VANKLGTWSKIGRLRRTR-PPRAFGDVGKESFHTAIAAGRILCDTYKSAQEFLRAETTYSLSHLAARQLGAQRADVDPADVPRLFAAGAGQIVQLAQLTAFDAGLVQRLMFKLQVIPLTKQLTNITGNLWSSTARGLRADRIDHLLLHEFHALKFVTPEKRAFKDKEKD 504
V +K+ WSK GR R+T P + + GK+ + +GR+LCDTY SAQE L ETTYSL++LA QL R +++P D P+ F IV LA+ T DA LVQRLMFKLQ++PLTKQLTNI GNLWS T + RA R ++LLLHEFH LK++ PEK K K++D
Sbjct: 1267 VEHKVRMWSKFGRQRKTELPSKTYFSSGKDWAISEAISGRLLCDTYLSAQEHLN-ETTYSLTNLAKTQLRTDRQEIEPMDTPQYFHKSE-TIVALARHTLNDAQLVQRLMFKLQILPLTKQLTNIAGNLWSQTMKSNRAGRTEYLLLHEFHRLKYLVPEKH--KGKKED 1431 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15383.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15383.1.1 >prot_P-wetherbeei_contig15383.1.1 ID=prot_P-wetherbeei_contig15383.1.1|Name=mRNA_P-wetherbeei_contig15383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp VANKLGTWSKIGRLRRTRPPRAFGDVGKESFHTAIAAGRILCDTYKSAQEback to top mRNA from alignment at P-wetherbeei_contig15383:74..1570- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15383.1.1 ID=mRNA_P-wetherbeei_contig15383.1.1|Name=mRNA_P-wetherbeei_contig15383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1497bp|location=Sequence derived from alignment at P-wetherbeei_contig15383:74..1570- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15383:74..1570- >mRNA_P-wetherbeei_contig15383.1.1 ID=mRNA_P-wetherbeei_contig15383.1.1|Name=mRNA_P-wetherbeei_contig15383.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=729bp|location=Sequence derived from alignment at P-wetherbeei_contig15383:74..1570- (Phaeothamnion wetherbeei SAG_119_79)back to top |