mRNA_P-wetherbeei_contig15381.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A836CPT6_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT6_9STRA) HSP 1 Score: 242 bits (617), Expect = 4.180e-77 Identity = 117/179 (65.36%), Postives = 140/179 (78.21%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGTASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
FVV+AAD QV RSI++YQ +LDKI +LD K++A GPQADC+ F EYIQKNM LYELNNDLRLST AAANYIR ELA ALR+GPYQ N+L+ GVD G A+L+W+DYLG L V Y A GY + FTL LLDR YR + EADAV +R CIA LHKRFLI+ P FVIKV+ DGI++++
Sbjct: 12 FVVLAADAQVARSILLYQNDLDKIKELDSHKMMALAGPQADCNLFGEYIQKNMALYELNNDLRLSTKAAANYIRRELATALRKGPYQVNMLMGGVDAGAAALYWLDYLGTLQPVKYGAQGYGAAFTLSLLDRSYRVGMAEADAVELVRSCIAALHKRFLIAQPNFVIKVVDKDGIRVLK 190
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A6U4C0Y9_9STRA (Proteasome subunit beta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C0Y9_9STRA) HSP 1 Score: 222 bits (566), Expect = 9.790e-69 Identity = 105/180 (58.33%), Postives = 140/180 (77.78%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGV-DGGTASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
FV++AAD GRSI++Y+Q+LDKI+ + +++++A VGPQADCS F EYIQKNM+LYEL N + LST AAN+IRGELA ALR+GPYQ NLLL G ASLFWMDYLG L KV+Y AHGYASNF L LLD + + +TE A+ +R+CI EL RF+I+LPK+ +KV+ ++G+++I+
Sbjct: 55 FVLLAADANAGRSILIYKQDLDKILPISENQIMATVGPQADCSVFGEYIQKNMRLYELENQINLSTFGAANFIRGELAKALRRGPYQVNLLLGGAAKDEEASLFWMDYLGTLQKVNYGAHGYASNFVLSLLDAHWEKGLTEEQAIEVLRKCIKELETRFMIALPKWSVKVVDSEGVRVID 234
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A6V1PTT6_HETAK (Proteasome subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PTT6_HETAK) HSP 1 Score: 215 bits (548), Expect = 1.240e-66 Identity = 105/180 (58.33%), Postives = 137/180 (76.11%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGT-ASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
+V++AAD GRSI++Y+ + DKIM LD +KLLA GP AD F EYIQKN+ LYEL NDL+L+T A A++IR LA ALR+GPYQTNLLL G D G L+WMDYLGA+HK+++ AHGY S+FTL + D E+RE ++EA+ + IR CIAEL RFLIS+PKFV K++ A+G++ IE
Sbjct: 12 YVMLAADANQGRSIIVYKSDYDKIMPLDSNKLLAQAGPNADTVNFGEYIQKNLALYELTNDLKLNTSATAHFIRRTLADALRKGPYQTNLLLGGKDEGKDPELYWMDYLGAMHKLNFGAHGYGSSFTLSIFDSEWREGLSEAEGLEIIRHCIAELRTRFLISMPKFVCKIVDANGMREIE 191
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: D8LF06_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF06_ECTSI) HSP 1 Score: 215 bits (548), Expect = 2.870e-66 Identity = 107/184 (58.15%), Postives = 137/184 (74.46%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDG-----GTASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
FVV+AAD QV RSI++Y+ +DKI L D+K LA GPQ+DC +FTEYI KNM LYELNND++L+T AAA +IRGELA ALR+GP+QT LL+ GVD ASLFW+DYLG L KV Y AHGY + FTL ++DREY + ++ +A+ I CI ELH RFLI+ FVIKV++A+GIK++
Sbjct: 12 FVVLAADAQVARSILLYKNNMDKIAHLADNKALACAGPQSDCVSFTEYISKNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKREAGKDEASLFWLDYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDEALGIIDNCIKELHTRFLIAQKNFVIKVVTAEGIKVVR 195
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A7S2XZZ5_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZZ5_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.900e-62 Identity = 102/187 (54.55%), Postives = 138/187 (73.80%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNND-LRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVD----GGTAS------LFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIK 880
FV+VAAD GRSI++++ + DK+ ++D +KLL GPQADC F+EYIQKNM+LY LNN+ L L T AAAN+IRGE+AYALR+GPYQ N+LL GVD G T S LF++DYL + H V++ HGY S+F L +LDR ++ED+T+ +A+ +++CI EL RFLIS PKF IK+++ADG K
Sbjct: 12 FVLVAADAMSGRSILIFKDDYDKVKEMDPNKLLGLAGPQADCENFSEYIQKNMELYRLNNNGLTLGTHAAANFIRGEMAYALRRGPYQCNMLLGGVDPPAKGSTDSEPAKPQLFFIDYLASCHPVNFGCHGYGSSFLLSILDRCWKEDLTQEEAIDIVKKCIHELEVRFLISQPKFTIKIVTADGTK 198
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A813A6P8_SYMMI (Proteasome subunit beta n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A6P8_SYMMI) HSP 1 Score: 203 bits (517), Expect = 5.960e-62 Identity = 102/190 (53.68%), Postives = 137/190 (72.11%), Query Frame = 2
Query: 323 SCLGAARFRRFVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGTA-SLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
SC G F ++AAD GRSI++++ ++DKIM+LD KLL G AD S F+E+IQKNMKLYELNND++LST AAA++ RGELA ALR+GPYQ N+L+AG D SL++MDYL +L KV++ A GYASNF L + DRE+ E + EA + IR+CI ELH RFLIS P FV+K++ +G + ++
Sbjct: 3 SCFGLVG-NGFAIIAADASAGRSILVFKHDVDKIMELDSHKLLVGSGTPADTSAFSEFIQKNMKLYELNNDMKLSTHAAASFTRGELAKALRKGPYQANMLMAGYDEQAGPSLYFMDYLASLAKVNFGAQGYASNFVLSVFDREWTEGMDEAAGLEVIRKCIHELHTRFLISQPVFVVKIVDVNGTRTVK 191
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A7S3NPS0_9STRA (Proteasome subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPS0_9STRA) HSP 1 Score: 203 bits (517), Expect = 6.360e-62 Identity = 97/182 (53.30%), Postives = 139/182 (76.37%), Query Frame = 2
Query: 347 RRFVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGT-ASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
+ F +VA+D RSIV+Y+Q+ DK+ LDD KLL + G AD FTEYIQKN+ LYE+++++ LST A AN+IR ELA ALR+GPYQTNLLL G D ASL+++DYL + +KV++ HGYASNF L + D+E+++ +TE++A+ +R+CIAEL RFL+SLP+FVIK++ A+GI+ ++
Sbjct: 10 QNFTIVASDRSAARSIVVYKQDEDKVKVLDDHKLLGSAGVSADSVAFTEYIQKNVALYEIDHNIALSTQATANFIRVELARALRKGPYQTNLLLGGYDADLGASLYYIDYLASSNKVNFGCHGYASNFILSIFDKEWKQGLTESEALEIVRKCIAELQTRFLVSLPEFVIKIVDANGIRSLD 191
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: F0YDA4_AURAN (Proteasome subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA4_AURAN) HSP 1 Score: 200 bits (508), Expect = 1.810e-60 Identity = 98/180 (54.44%), Postives = 131/180 (72.78%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGT-ASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
+ +V AD RSIV ++++ DKIMKLDD KLL G AD FTEY+QKN+ LY++NN L LST A N+IRG+LA ALR+GPYQTNLLL G D G ASL+++DY+ + +KV++ HGY SNF L +LDRE+ E + EA + I +CIAEL RFLI +PKF+IK++ DGI+++E
Sbjct: 12 YAIVCADQNAARSIVCFKKDEDKIMKLDDFKLLGQSGVGADNVAFTEYVQKNVALYKINNGLSLSTKATNNFIRGDLATALRKGPYQTNLLLGGFDKGVGASLYYIDYMASSNKVNFGCHGYGSNFVLSILDREWTEGLDEAAGLDIINKCIAELQTRFLIHMPKFLIKIVDKDGIRVLE 191
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: W7TFQ9_9STRA (Proteasome subunit beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFQ9_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.560e-60 Identity = 100/177 (56.50%), Postives = 130/177 (73.45%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGT-ASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIK 880
FV++AAD RSI++++ + DKI LD KLLAA GP ADCS TEY+QKNM LYE NNDL+L T AAAN+IR LA ALR+GPYQTNLLL G D A+L+++DYLG++ KV++ A GYASNFTL + DREYRE +T +A + + EL RFLIS PK+++KV+ DG++
Sbjct: 56 FVLIAADASAARSILVFKTDQDKIAALDSHKLLAAAGPNADCSNLTEYVQKNMALYEFNNDLKLGTHAAANFIRRTLATALRKGPYQTNLLLGGFDEKDGAALYFLDYLGSMQKVNFGAQGYASNFTLSIFDREYREGMTLPEAEVVLEKAKKELAVRFLISQPKWIMKVVDKDGVR 232
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Match: A0A7S2FKQ2_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKQ2_9STRA) HSP 1 Score: 199 bits (505), Expect = 8.270e-60 Identity = 97/180 (53.89%), Postives = 131/180 (72.78%), Query Frame = 2
Query: 353 FVVVAADMQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYELNNDLRLSTPAAANYIRGELAYALRQGPYQTNLLLAGVDGGT-ASLFWMDYLGALHKVSYAAHGYASNFTLGLLDREYREDITEADAVASIRRCIAELHKRFLISLPKFVIKVISADGIKIIE 889
F ++ AD RSI+++ Q DKI +LD K++ GPQ D + F EYIQKNM LYELNND++LST A AN++R +LA ALR+GPYQTN+LL G D G ASL+++D AL V++ AHGYASNF L + DREY+E ++ +A A I +CIAELH RFLIS P F+IK++ DG++++E
Sbjct: 36 FTMIVADRTSARSIMVFNQAEDKITELDSHKIIGQSGPQCDTANFAEYIQKNMTLYELNNDMKLSTFATANFMRRQLATALRKGPYQTNILLGGYDEGAGASLYFLDLYSALTPVNFGAHGYASNFCLSIFDREYKEGMSVEEAKAVIDKCIAELHTRFLISQPNFLIKIVDKDGVRVME 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15381.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15381.1.1 >prot_P-wetherbeei_contig15381.1.1 ID=prot_P-wetherbeei_contig15381.1.1|Name=mRNA_P-wetherbeei_contig15381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MQVGRSIVMYQQELDKIMKLDDSKLLAAVGPQADCSTFTEYIQKNMKLYEback to top mRNA from alignment at P-wetherbeei_contig15381:195..1616- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15381.1.1 ID=mRNA_P-wetherbeei_contig15381.1.1|Name=mRNA_P-wetherbeei_contig15381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1422bp|location=Sequence derived from alignment at P-wetherbeei_contig15381:195..1616- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15381:195..1616- >mRNA_P-wetherbeei_contig15381.1.1 ID=mRNA_P-wetherbeei_contig15381.1.1|Name=mRNA_P-wetherbeei_contig15381.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig15381:195..1616- (Phaeothamnion wetherbeei SAG_119_79)back to top |