mRNA_P-wetherbeei_contig15287.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15287.1.1
Unique NamemRNA_P-wetherbeei_contig15287.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A7C4TMQ1_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TMQ1_9HYPH)

HSP 1 Score: 543 bits (1400), Expect = 7.050e-192
Identity = 265/356 (74.44%), Postives = 314/356 (88.20%), Query Frame = 1
Query:   49 RRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            RRH+EHDLL++ALPHP++ +A+D+R+IYANPAAE F S+S AVL+R  L D+V F CPLVALV+QVRRS   VNEYGIEV +PR + +RLVDVYSGP+ +QPG+++LMLQQRSMA MIERQLTHRA+ARSVSGMA VLAHEIKNPLSGIRGAAQLLEA++ +E R LTQLIC ETDRIR+LVDRMEVFGDERPLA +PVNIHAVLDHVR++A+TGF  GV +  +YDPSLP + GNRDKL+QAFLNLVKNAAE++    E GRIVL+TAFRPGVRL+VPG ++RV+LPLMIE+EDNG GV DH++ HLFDPFVTTKR+G+GLGLALVAKII DHGGIIE ++ER RT+FRVLLPMQ
Sbjct:   17 RRHIEHDLLLAALPHPVLVLAEDDRIIYANPAAEAFLSSSQAVLKRQRLADVVSFGCPLVALVEQVRRSEATVNEYGIEVMLPRAEASRLVDVYSGPIADQPGLVVLMLQQRSMAQMIERQLTHRAAARSVSGMAAVLAHEIKNPLSGIRGAAQLLEANIRDEDRALTQLICAETDRIRNLVDRMEVFGDERPLAKEPVNIHAVLDHVRKLAQTGFARGVKIIEDYDPSLPAVDGNRDKLVQAFLNLVKNAAEAVEQSGEAGRIVLKTAFRPGVRLSVPGVSARVSLPLMIEVEDNGPGVPDHLRPHLFDPFVTTKRKGAGLGLALVAKIIGDHGGIIECDTERERTVFRVLLPMQ 372          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A537RZ99_9PROT (Histidine kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RZ99_9PROT)

HSP 1 Score: 532 bits (1370), Expect = 2.230e-187
Identity = 267/359 (74.37%), Postives = 310/359 (86.35%), Query Frame = 1
Query:   43 TMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPG-RIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            + RRH+EHDLL++ALPHP++ + DD+RV+YAN AAE FFS S  +L+R TLPDI+ F+ PL ALV QVR+SG  VNEYG+EV +PR    RLVDV++G +PEQPG+I+LMLQQRSMA MIERQLTHRA+ARSVSGMA VLAHEIKNPLSGIRGAAQLLE  + +E R LTQLICTETDRIRDLVDRMEVFGDERPLA +PVNIH+VLDHV+R+AETGF  G+ +  EYDPSLPP+PGNRDKLIQAFLNLVKNAAESI    EPG RIVLRTAFRPGVRL+VPGT +RV+LPLMIE+ED G GV + +K HLFDPFVTTKR+G+GLGLALVAKII DHGG+IE ES  +RT+FRVLLP+Q
Sbjct:   12 SQRRHIEHDLLLAALPHPVLVLGDDDRVLYANLAAETFFSLSHGMLKRQTLPDIIAFSSPLGALVGQVRKSGATVNEYGVEVDLPRSGVHRLVDVFAGGIPEQPGLIVLMLQQRSMAQMIERQLTHRAAARSVSGMAAVLAHEIKNPLSGIRGAAQLLEPGLGDEDRALTQLICTETDRIRDLVDRMEVFGDERPLAAEPVNIHSVLDHVKRLAETGFADGIKVNVEYDPSLPPLPGNRDKLIQAFLNLVKNAAESIEESREPGGRIVLRTAFRPGVRLSVPGTGARVSLPLMIEVEDTGAGVPEELKPHLFDPFVTTKRKGTGLGLALVAKIIGDHGGVIECESVPKRTVFRVLLPLQ 370          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A431NT70_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431NT70_9HYPH)

HSP 1 Score: 529 bits (1363), Expect = 2.410e-186
Identity = 258/356 (72.47%), Postives = 310/356 (87.08%), Query Frame = 1
Query:   49 RRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            RRH+E+D+L++ALPH I+ + DD+R++YAN AAE FFS SLA++RR  LP++V F+ PL ALV QVRR+G  VNEYG++V +PRI+  ++VDV+ GPLP+Q G+ILLMLQQRSMA MIERQLTHR +ARSVSGMAEVLAHEIKNPLSGIRGAAQLLE  + +E R LTQLIC ETDRIR+LVDRMEVFGDERP+A +PVNIH VLDHV+R+AETGF  GV ++AE+DPSLPP+PG+RDKL+QAFLNLVKNAAE+I    EPGRI LRTAFRPG+RLAVPG+ +R++LPLMIE+ED G GVA+ +K HLFDPFVT+KR GSGLGLALVAKIIRDHGG+IE ES  +RT+FRVLLPMQ
Sbjct:   15 RRHIEYDMLLAALPHAILVLGDDDRILYANAAAENFFSLSLAMMRRQMLPELVAFSSPLAALVAQVRRAGASVNEYGVDVELPRINQHKMVDVFGGPLPDQSGLILLMLQQRSMAQMIERQLTHRQAARSVSGMAEVLAHEIKNPLSGIRGAAQLLEPGLKDEDRALTQLICAETDRIRNLVDRMEVFGDERPIAAEPVNIHVVLDHVKRLAETGFSKGVKISAEFDPSLPPVPGSRDKLVQAFLNLVKNAAEAIGEGGEPGRITLRTAFRPGMRLAVPGSKARISLPLMIEVEDTGPGVAEDMKPHLFDPFVTSKRAGSGLGLALVAKIIRDHGGVIECESVPKRTVFRVLLPMQ 370          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A7C2QV48_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QV48_9HYPH)

HSP 1 Score: 524 bits (1349), Expect = 3.370e-184
Identity = 262/365 (71.78%), Postives = 307/365 (84.11%), Query Frame = 1
Query:   22 SEQAAQPTMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            + + A P  RRH+EHDLL++ALPHPI+ + +D RV+YAN AAE FFS S  +L+R TLPDI+ F+ PL ALV QVRRSG  VNEYG++V +PR    RLVDV++G +PEQPG+I+LMLQQRSMA MIERQLTHRA+ARSVSGMA VLAHEIKNPLSGIRGAAQLLE  + +E R LTQLIC ETDRIR+LVDRMEVFGDERPL  +PVNIHAVLDHV+++AE GF  G+ +  +YDPSLPP+  NRDKLIQAFLNLVKNAAE+I+   EPGRI LRTAFRPGVRL+VPG  +RV+LPLMIE+ED G GVA+ +K HLFDPFVTTKR+G+GLGLALVAKII DHGGIIE ES  +RT+FRVLLPMQ
Sbjct:    5 ARERAGPGQRRHIEHDLLLAALPHPILVLGEDERVLYANGAAESFFSLSHGMLKRQTLPDIIAFSSPLAALVAQVRRSGATVNEYGVDVGLPRSGVHRLVDVFAGVMPEQPGLIVLMLQQRSMAQMIERQLTHRAAARSVSGMAAVLAHEIKNPLSGIRGAAQLLEPGLRDEDRALTQLICAETDRIRNLVDRMEVFGDERPLGTEPVNIHAVLDHVKKLAEAGFADGLRIQVDYDPSLPPVLANRDKLIQAFLNLVKNAAEAIAEGREPGRITLRTAFRPGVRLSVPGANARVSLPLMIEVEDTGPGVAEELKPHLFDPFVTTKRKGTGLGLALVAKIIGDHGGIIECESVPKRTVFRVLLPMQ 369          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A6N6SZN2_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SZN2_9HYPH)

HSP 1 Score: 522 bits (1344), Expect = 1.940e-183
Identity = 259/358 (72.35%), Postives = 306/358 (85.47%), Query Frame = 1
Query:   43 TMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            T RRH+E+DLL++ LPHPI+ + DD+RV+YAN AAE FFS S  +L+R TLPDI+ F+ PL ALV QVRRSG  VNEYG++V +PR    RLVDV+ GP+PEQPG+I+LMLQQRSMA MIERQLTHRA+ARSVSGMA VLAHEIKNPLSGIRGAAQLLE  + +E R LTQLICTETDRIR LVDRMEVFGDERPL  +PVNIH+VLDHV+R+AETGF   + ++ ++DPSLPP+ GNRDKLIQAFLNLVKNAAE+I    E GRIVLRTAFRPGVRL+VPG+ +RV+LPLMIE+ED+G GV + +K HLFDPFVTTKR G+GLGLALVAKII DHGG+IE ES+ +RT+FRVLLP+Q
Sbjct:   13 TPRRHIEYDLLLATLPHPILVLGDDDRVLYANAAAESFFSLSQGMLKRQTLPDIIAFSSPLAALVGQVRRSGVTVNEYGVDVGLPRSGVHRLVDVFGGPVPEQPGLIVLMLQQRSMAQMIERQLTHRAAARSVSGMAAVLAHEIKNPLSGIRGAAQLLEPGLKDEDRALTQLICTETDRIRTLVDRMEVFGDERPLGTEPVNIHSVLDHVKRLAETGFAEKIKISVDFDPSLPPVAGNRDKLIQAFLNLVKNAAEAIEEGREAGRIVLRTAFRPGVRLSVPGSNARVSLPLMIEVEDSGPGVPEQLKPHLFDPFVTTKRTGTGLGLALVAKIIGDHGGVIECESDPKRTVFRVLLPLQ 370          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A2W4L1H4_9PROT (Histidine kinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4L1H4_9PROT)

HSP 1 Score: 518 bits (1335), Expect = 5.840e-182
Identity = 262/361 (72.58%), Postives = 304/361 (84.21%), Query Frame = 1
Query:   40 PTMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRID-GARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESI-SGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            P  ++HV+HDLL++ALPHPI+ + +D+R++YANPAAE FFS   A L+R  L D+V F CPLV+LV+QVRR+G  VNEYGIEV +PR+D G +LVD Y GPLPEQP +I+LMLQQR+MA MIERQLTHRA+ARSVSGMA +LAHEIKNPLSGIRGAAQL+E ++S + R L QLIC ETDRIRDLVDRMEVFGDERPLA  PVNIH VLDHV +IA +GFG GV   A YDPSLPP+PGNRDKLIQAFLNLVKNA E+I SG    GRI+L TAFRPGVRL+VPG+ +RV+LPLMIEIEDNG GV DH+K HLFDPFVTTK  G+GLGL+LVAKII DHGGIIE ESE +RTIFRV LP+Q
Sbjct:   14 PASQKHVQHDLLLAALPHPILTLGEDDRILYANPAAEQFFSVGQARLKRHRLADLVAFGCPLVSLVEQVRRTGVSVNEYGIEVVIPRVDDGPKLVDAYGGPLPEQPSLIVLMLQQRTMAQMIERQLTHRAAARSVSGMAAMLAHEIKNPLSGIRGAAQLIEPNLSPQDRALAQLICKETDRIRDLVDRMEVFGDERPLAKSPVNIHDVLDHVCQIATSGFGRGVKFIARYDPSLPPVPGNRDKLIQAFLNLVKNAVEAIESGGESGGRIILTTAFRPGVRLSVPGSGTRVSLPLMIEIEDNGSGVPDHLKPHLFDPFVTTKPNGTGLGLSLVAKIIGDHGGIIECESEPKRTIFRVFLPLQ 374          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A1E4CW71_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobium sp. SCN 65-11 TaxID=1660102 RepID=A0A1E4CW71_9HYPH)

HSP 1 Score: 514 bits (1324), Expect = 2.850e-180
Identity = 255/361 (70.64%), Postives = 302/361 (83.66%), Query Frame = 1
Query:   43 TMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQPAA 1125
            T RRH+EHD+LV ALPHPII +A D RVIYAN AAE FF +S AVL+R  +  IV   CPL++L  QV R+G  VNEYG+ ++ P++   RLVD+Y GPLP+ P ++LLMLQQRSMA MIERQLTHRA+ARSVSG+A VLAHEIKNPLSGIRGAAQLLE  +S+E R L +LIC+ETDRIR+LVDRMEVFGDERPLA +PVNIH VLDHV+RIAE+GF  G+ +  +YDPSLPPIPGNRDKL+QAFLNLVKNAAE++    + GRI+L TAFRPGVRL+VPG+ +RVALPLMIEIEDNG G+A+ V+ HLFDPFVTTKR G+GLGLALVAKI+ DHGGIIE +SE R+T+FRVLLPMQ  A
Sbjct:   17 TTRRHIEHDVLVGALPHPIIVLAADERVIYANVAAETFFQSSQAVLKRQQIGSIVSDDCPLISLARQVARTGSTVNEYGVLISTPKVQAPRLVDIYGGPLPDAPDLVLLMLQQRSMAQMIERQLTHRAAARSVSGLAAVLAHEIKNPLSGIRGAAQLLEPSLSDEDRALARLICSETDRIRNLVDRMEVFGDERPLATEPVNIHDVLDHVKRIAESGFARGIRIQEQYDPSLPPIPGNRDKLVQAFLNLVKNAAEALGETRDGGRIILTTAFRPGVRLSVPGSQARVALPLMIEIEDNGPGIAEAVRSHLFDPFVTTKRTGTGLGLALVAKIVGDHGGIIECDSEPRKTVFRVLLPMQERA 377          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A109BMI9_HYPSL (Histidine kinase n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BMI9_HYPSL)

HSP 1 Score: 511 bits (1317), Expect = 3.190e-179
Identity = 250/369 (67.75%), Postives = 301/369 (81.57%), Query Frame = 1
Query:   10 TPSTSEQAAQPTMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQ 1116
            T + +  AA    RR +EHDLL+ ALPHPI+ +ADDNR+++AN AAE F S  +A+L+R  L ++V F CPL+ LVDQVR SG  +NEYG+EV  P+    +LVDVY GP+PE PG ++LM QQR+MA MIERQLTHRA+ARSVSG+A VLAHEIKNPLSGIRGAAQLLE  +S+E R L+QLIC+ETDRIR+LVDRMEVFGDERPLA  PVNIH VLDHVRR+ E+GFG GV   A+YDPSLPP+PGNRDKL+QA LNLVKNA E+I      GRI+++T+FRPGVRL+VPG+  R++LPLMI+IEDNG GV D +K+HLFDPFVTTK  G+GLGLALVAKII DHGG+IE ++E  RTIFRVLLPMQ
Sbjct:    6 TTAATRVAANVNTRRPIEHDLLLGALPHPILVLADDNRIVFANAAAEAFLSIGVALLKRAKLDEVVAFGCPLLQLVDQVRTSGVTLNEYGVEVASPKFQIPKLVDVYGGPMPESPGYVVLMFQQRNMAQMIERQLTHRAAARSVSGLASVLAHEIKNPLSGIRGAAQLLEQGLSDEDRALSQLICSETDRIRNLVDRMEVFGDERPLAKDPVNIHDVLDHVRRLCESGFGRGVRFVADYDPSLPPVPGNRDKLVQAMLNLVKNAVEAIGDNRTQGRIIIQTSFRPGVRLSVPGSDMRISLPLMIQIEDNGGGVPDDIKEHLFDPFVTTKLNGTGLGLALVAKIINDHGGVIELDNEPNRTIFRVLLPMQ 374          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A6I3KJW7_9HYPH (Histidine kinase n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KJW7_9HYPH)

HSP 1 Score: 503 bits (1296), Expect = 4.800e-176
Identity = 249/375 (66.40%), Postives = 306/375 (81.60%), Query Frame = 1
Query:    1 MTQTPSTSEQAAQPTMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPMQPAA 1125
            MT+T + +  AA    RR VEHDLL++ALPHPII + ++NR++YAN AAE F S+ +A+L+R+ L +IV F CPL+ LV+QVR SG  VNEYGIEV+ P+    +LVDVY G +P+ P +++LMLQQR+MA MIERQLTHRA+ARSVSG+A VLAHEIKNPLSGIRGAAQLLE  +++  R LTQLIC+ETDRIR+LVDRMEVFGDERPL  +PVNIH VLDHVRR+ E+GFG G+    +YDPSLPP+ GNRDKL+QA LNLVKNA E+I      GR+V++T+FRPGVRL+V G+  R++LPLMI+IEDNG GV DH+K+HLFDPFVTTK  G+GLGLALVAKII DHGGIIE +SE +RT+FRVLLPMQ  A
Sbjct:    1 MTKTATATRPAAP--SRRPVEHDLLLAALPHPIIVLGEENRIVYANSAAEAFLSSGVALLKRIKLEEIVAFGCPLLGLVEQVRSSGSTVNEYGIEVSGPKFQTPKLVDVYGGAMPDNPELVVLMLQQRNMAQMIERQLTHRAAARSVSGLAAVLAHEIKNPLSGIRGAAQLLEQGITDADRSLTQLICSETDRIRNLVDRMEVFGDERPLVKEPVNIHDVLDHVRRLCESGFGRGIRFIEDYDPSLPPVSGNRDKLVQAILNLVKNAVEAIGENKAQGRVVIQTSFRPGVRLSVQGSDMRISLPLMIQIEDNGSGVPDHLKEHLFDPFVTTKPYGTGLGLALVAKIINDHGGIIELDSEPKRTVFRVLLPMQDRA 373          
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Match: A0A2S5PC21_HYPSQ (Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PC21_HYPSQ)

HSP 1 Score: 496 bits (1277), Expect = 2.250e-173
Identity = 243/355 (68.45%), Postives = 293/355 (82.54%), Query Frame = 1
Query:   49 RRHVEHDLLVSALPHPIIAVADDNRVIYANPAAEGFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPRIDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGMAEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDRMEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIPGNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSRVALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDHGGIIEFESERRRTIFRVLLPM 1113
            RR VEHDLL++A+PHPI+ +  DNR +YAN AAE F S S  +L+R+TL ++V F CPL  LV+QVR +   +NEYGIE+  P+    +LVDVYSGPLP+QP  +LLMLQQR+MA MIERQLTHRA+ARSVSGMA VLAHEIKNPLSGIRGAAQLLE  +S+E R L QLIC ETDRI+ LVDRMEVFGDERPL    VNIH +LDHVRR++E+GF  G+   A+YDPSLP +PGNRDKL+QAFLNL KNAAE+I   ++PGRIVL+TAFRPGVRL +PG+  R++LPLMI++EDNG G+ DH+K ++FDPFVTTKR G+GLGLALVAKII DHGGIIE ESE +RT+FRVLLP+
Sbjct:    5 RRPVEHDLLLAAIPHPILVLGPDNRAVYANAAAESFLSTSAPMLKRMTLEEVVAFGCPLNGLVEQVRANQQTINEYGIEMVTPKFTAPKLVDVYSGPLPDQPSHVLLMLQQRTMAQMIERQLTHRAAARSVSGMAAVLAHEIKNPLSGIRGAAQLLEPSLSDEDRPLAQLICAETDRIKALVDRMEVFGDERPLERTSVNIHDILDHVRRLSESGFARGIRFVADYDPSLPLLPGNRDKLVQAFLNLFKNAAEAIGDGTDPGRIVLQTAFRPGVRLTLPGSGVRISLPLMIQVEDNGPGIPDHLKPNMFDPFVTTKRTGTGLGLALVAKIIGDHGGIIECESEPKRTVFRVLLPL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15287.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TMQ1_9HYPH7.050e-19274.44Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A537RZ99_9PROT2.230e-18774.37Histidine kinase n=1 Tax=Alphaproteobacteria bacte... [more]
A0A431NT70_9HYPH2.410e-18672.47Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A7C2QV48_9HYPH3.370e-18471.78Histidine kinase n=1 Tax=Hyphomicrobiales bacteriu... [more]
A0A6N6SZN2_9HYPH1.940e-18372.35Histidine kinase n=1 Tax=Hyphomicrobiaceae bacteri... [more]
A0A2W4L1H4_9PROT5.840e-18272.58Histidine kinase n=1 Tax=Proteobacteria bacterium ... [more]
A0A1E4CW71_9HYPH2.850e-18070.64Histidine kinase n=1 Tax=Hyphomicrobium sp. SCN 65... [more]
A0A109BMI9_HYPSL3.190e-17967.75Histidine kinase n=2 Tax=Hyphomicrobium sulfonivor... [more]
A0A6I3KJW7_9HYPH4.800e-17666.40Histidine kinase n=3 Tax=Hyphomicrobium TaxID=81 R... [more]
A0A2S5PC21_HYPSQ2.250e-17368.45Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15287contigP-wetherbeei_contig15287:173..1297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1267005.KB911263_gene1292
Preferred namentrB
PFAMsHATPase_c,HisKA,PAS,PAS_4
Model size1125
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07708
KEGG Pathwayko02020,map02020
KEGG ModuleM00497
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.5e-174
EggNOG OGsCOG3852@1|root,COG3852@2|Bacteria,1MVN6@1224|Proteobacteria,2TQS1@28211|Alphaproteobacteria,3N6I4@45401|Hyphomicrobiaceae
EC2.7.13.3
DescriptionHis Kinase A (phospho-acceptor) domain
Cds size1125
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186051.0872464-CDS-P-wetherbeei_contig15287:172..12971683186051.0872464-CDS-P-wetherbeei_contig15287:172..1297Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15287 173..1297 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15287.1.1prot_P-wetherbeei_contig15287.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15287 173..1297 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15287.1.1

>prot_P-wetherbeei_contig15287.1.1 ID=prot_P-wetherbeei_contig15287.1.1|Name=mRNA_P-wetherbeei_contig15287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp
MTQTPSTSEQAAQPTMRRHVEHDLLVSALPHPIIAVADDNRVIYANPAAE
GFFSASLAVLRRLTLPDIVGFACPLVALVDQVRRSGGGVNEYGIEVTMPR
IDGARLVDVYSGPLPEQPGVILLMLQQRSMALMIERQLTHRASARSVSGM
AEVLAHEIKNPLSGIRGAAQLLEADVSEEGRELTQLICTETDRIRDLVDR
MEVFGDERPLAIQPVNIHAVLDHVRRIAETGFGSGVHLAAEYDPSLPPIP
GNRDKLIQAFLNLVKNAAESISGQSEPGRIVLRTAFRPGVRLAVPGTTSR
VALPLMIEIEDNGQGVADHVKQHLFDPFVTTKRRGSGLGLALVAKIIRDH
GGIIEFESERRRTIFRVLLPMQPAA
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mRNA from alignment at P-wetherbeei_contig15287:173..1297-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15287.1.1 ID=mRNA_P-wetherbeei_contig15287.1.1|Name=mRNA_P-wetherbeei_contig15287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig15287:173..1297- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCCAGACACCTTCGACATCCGAGCAGGCCGCGCAGCCCACGATGCG CCGCCATGTCGAGCACGACCTCCTGGTGTCGGCGCTTCCCCATCCCATCA TCGCGGTCGCCGACGACAATCGCGTGATCTATGCCAACCCTGCGGCCGAA GGGTTCTTCTCGGCGAGCCTTGCCGTCCTGCGGCGCCTTACGCTGCCCGA CATTGTCGGGTTCGCCTGTCCCCTGGTCGCCCTGGTGGATCAGGTTCGCC GGAGCGGCGGCGGCGTCAACGAGTACGGCATCGAGGTGACGATGCCGCGC ATCGACGGCGCCCGCCTCGTCGACGTCTATTCCGGTCCGCTGCCCGAGCA ACCCGGCGTCATCCTGTTGATGCTCCAGCAGCGCTCGATGGCGCTCATGA TCGAGCGGCAACTGACGCATCGCGCCTCGGCGCGGTCGGTATCGGGCATG GCCGAGGTGCTGGCGCATGAAATCAAGAACCCGCTATCGGGAATAAGAGG CGCTGCCCAGTTGCTCGAAGCCGACGTCTCCGAGGAAGGGCGGGAACTGA CACAGCTCATCTGCACCGAGACCGATCGTATCCGCGACCTCGTCGATCGG ATGGAAGTTTTCGGTGACGAACGCCCGCTCGCGATCCAGCCGGTCAATAT CCATGCCGTGCTCGATCATGTCCGCCGCATCGCGGAGACGGGCTTCGGCT CAGGCGTACACCTGGCGGCCGAATACGATCCCTCGCTGCCGCCCATTCCG GGCAATCGCGACAAGCTGATCCAGGCCTTCCTCAACCTCGTCAAGAACGC CGCCGAATCGATCTCCGGCCAGTCCGAACCCGGTCGGATCGTGCTGAGAA CGGCGTTCCGGCCCGGCGTTCGCCTTGCCGTTCCCGGAACGACGTCGCGA GTCGCGTTGCCGCTGATGATCGAAATCGAGGACAACGGGCAGGGCGTCGC CGATCACGTCAAGCAGCATCTGTTCGACCCGTTCGTCACCACCAAACGGC GCGGTTCGGGGCTCGGACTTGCGCTCGTCGCAAAGATCATCCGCGACCAC GGCGGCATCATCGAGTTCGAGAGCGAGCGCCGCCGGACGATTTTCCGCGT CCTGCTGCCCATGCAACCGGCAGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15287:173..1297-

>mRNA_P-wetherbeei_contig15287.1.1 ID=mRNA_P-wetherbeei_contig15287.1.1|Name=mRNA_P-wetherbeei_contig15287.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1125bp|location=Sequence derived from alignment at P-wetherbeei_contig15287:173..1297- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCCAGACACCTTCGACATCCGAGCAGGCCGCGCAGCCCACGATGCG
CCGCCATGTCGAGCACGACCTCCTGGTGTCGGCGCTTCCCCATCCCATCA
TCGCGGTCGCCGACGACAATCGCGTGATCTATGCCAACCCTGCGGCCGAA
GGGTTCTTCTCGGCGAGCCTTGCCGTCCTGCGGCGCCTTACGCTGCCCGA
CATTGTCGGGTTCGCCTGTCCCCTGGTCGCCCTGGTGGATCAGGTTCGCC
GGAGCGGCGGCGGCGTCAACGAGTACGGCATCGAGGTGACGATGCCGCGC
ATCGACGGCGCCCGCCTCGTCGACGTCTATTCCGGTCCGCTGCCCGAGCA
ACCCGGCGTCATCCTGTTGATGCTCCAGCAGCGCTCGATGGCGCTCATGA
TCGAGCGGCAACTGACGCATCGCGCCTCGGCGCGGTCGGTATCGGGCATG
GCCGAGGTGCTGGCGCATGAAATCAAGAACCCGCTATCGGGAATAAGAGG
CGCTGCCCAGTTGCTCGAAGCCGACGTCTCCGAGGAAGGGCGGGAACTGA
CACAGCTCATCTGCACCGAGACCGATCGTATCCGCGACCTCGTCGATCGG
ATGGAAGTTTTCGGTGACGAACGCCCGCTCGCGATCCAGCCGGTCAATAT
CCATGCCGTGCTCGATCATGTCCGCCGCATCGCGGAGACGGGCTTCGGCT
CAGGCGTACACCTGGCGGCCGAATACGATCCCTCGCTGCCGCCCATTCCG
GGCAATCGCGACAAGCTGATCCAGGCCTTCCTCAACCTCGTCAAGAACGC
CGCCGAATCGATCTCCGGCCAGTCCGAACCCGGTCGGATCGTGCTGAGAA
CGGCGTTCCGGCCCGGCGTTCGCCTTGCCGTTCCCGGAACGACGTCGCGA
GTCGCGTTGCCGCTGATGATCGAAATCGAGGACAACGGGCAGGGCGTCGC
CGATCACGTCAAGCAGCATCTGTTCGACCCGTTCGTCACCACCAAACGGC
GCGGTTCGGGGCTCGGACTTGCGCTCGTCGCAAAGATCATCCGCGACCAC
GGCGGCATCATCGAGTTCGAGAGCGAGCGCCGCCGGACGATTTTCCGCGT
CCTGCTGCCCATGCAACCGGCAGCC
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