mRNA_P-wetherbeei_contig15285.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: D8LPR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR1_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.440e-51 Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 118 RPAATSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
+PAAT +++ ND + +++ L P MVAAW P++S+HV+TN+RL L RL +SL + +LGD V + FHVDVDAD L DYL+ WP G K+IH R++RGGLI+AVTESFHP+TPH YA+ LE+D+EVSP +Y+W KH LLRYRY
Sbjct: 130 KPAAT--IKMGSNDPLYLSFLPALDPAMVAAWHQPKISIHVITNDRLSSLVRLVKSLQDSHFLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRY 276
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE) HSP 1 Score: 182 bits (463), Expect = 5.860e-50 Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 118 RPAATSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
+PAAT +++ ND + +++ L P MVAAW P++S+HV+TN+RL L RL +SL + +LGD V + FHVDVDAD L DYL+ WP G K+IH R++RGGLI+AVTESFHP+TPH YA+ LE+D+EVSP +Y+W KH LLRYRY
Sbjct: 683 KPAAT--IKMGSNDPLYLSFLPALDPAMVAAWHQPKISIHVITNDRLTSLMRLVKSLQDSHFLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRY 829
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A5P1EDG8_ASPOF (Uncharacterized protein n=3 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EDG8_ASPOF) HSP 1 Score: 143 bits (361), Expect = 2.340e-37 Identity = 64/143 (44.76%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 136 LLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
L+ +PRN + WMA L P + W ++S++++T NR L+RL +SL A YLGD V++ F++D DD + +F WPHGP + RR+ +GGLI AV+ES++P++ + +LLE+D+EVSP YY W+K+ALL YRY
Sbjct: 134 LVPLPRNSIGKVLWMADLRPSALPNWNKMKISVNIITQNRATSLQRLLKSLQNAYYLGDEVSLSFNMDSGVDDVTLKTIDSFNWPHGPTTVRRRIVQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYRY 276
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: J3LI56_ORYBR (Uncharacterized protein n=16 Tax=Oryzeae TaxID=147380 RepID=J3LI56_ORYBR) HSP 1 Score: 145 bits (367), Expect = 4.810e-37 Identity = 68/145 (46.90%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 130 TSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
T+L+ +PRN + WMA L P + W +S++++T NR LRRL SL +A Y+GD V + F++D D A + + +F WPHG K + RR+ +GGLI AV+ES++PA+ Y +LLE+D+EVSP YY WVK+ALL YRY
Sbjct: 557 TALVLLPRNSISKVLWMATLRPTSLPNWNRMRISVNIITQNRAKSLRRLLASLRSAYYVGDEVPISFNMDSRVDAATLNVVNSFEWPHGGKTLRRRIIQGGLIRAVSESWYPASDDDYGLLLEDDIEVSPYYYLWVKYALLAYRY 701
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A0D9VME1_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VME1_9ORYZ) HSP 1 Score: 144 bits (364), Expect = 1.210e-36 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 130 TSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
T+L+ +PRN + WM L P + W +S++++T NR LRRL SL A Y+GD V + F++D D A + + +F WPHGPK + RR+ +GGLI AV+ES++PA Y +LLE+D+EVSP YY WVK+ALL YRY
Sbjct: 569 TALVLLPRNSISKVLWMPTLRPTALPNWNKMRISVNIITQNRAGSLRRLLSSLRNAYYVGDEVPISFNMDSRVDAATLNVVNSFNWPHGPKTLRRRIIQGGLIRAVSESWYPANDDDYGLLLEDDIEVSPYYYLWVKYALLAYRY 713
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A835QY34_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QY34_VANPL) HSP 1 Score: 142 bits (357), Expect = 1.700e-36 Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 136 LLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
L+ +PR + WMA + P + W +S+++VT NR L+RL RSL A YLGD +++ F++D DD + +F WPHG K + RR+ +GGLI AV+ES++PA+ +Y +LLE+D+EVSP YY W+K+ALL Y+Y
Sbjct: 149 LILLPRASITKVLWMADIRPTALPNWNRMRISINIVTQNRATSLQRLLRSLQNAFYLGDEISISFNMDSKVDDNTLKVVGSFHWPHGSKHVRRRIIQGGLIRAVSESWYPASDDEYGLLLEDDIEVSPYYYLWIKYALLAYQY 291
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A2N9HWR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HWR8_FAGSY) HSP 1 Score: 144 bits (362), Expect = 2.270e-36 Identity = 65/146 (44.52%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 127 ATSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
AT+L+ +PR + WMA L P + W +S++++T NR L RL +SL A YLGD + + F++D D+A + +F WPHGPK + RR+ +GGLI AV+ES++P++ Y +LLE+D+EVSP YY W+K+ALL Y Y
Sbjct: 558 ATTLVLLPRPSISKVLWMADLRPTALPYWNRMRISVNIITQNRAHSLTRLLKSLSNAYYLGDEIPISFNMDSKVDEATIKLVNSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDYGLLLEDDIEVSPYYYLWIKYALLAYHY 703
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A1D6HNS3_MAIZE (Glycosyltransferase family protein 2 n=18 Tax=Panicoideae TaxID=147369 RepID=A0A1D6HNS3_MAIZE) HSP 1 Score: 144 bits (362), Expect = 2.270e-36 Identity = 67/145 (46.21%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 130 TSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
T+L+ VPR+ + WMA L P + W +S++++T NR L RL SL +A YLGD V + F++D D A + +F WPHGPK + RR+ +GGLI AV+ES++P++ Y +LLE+D+EVSP YY W+K+ALL YRY
Sbjct: 568 TALVLVPRSSVSKVLWMATLKPASLPNWNRMRISVNIITQNRAKSLLRLLTSLRSAYYLGDEVPISFNMDSRVDAATLKVVNSFDWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDYGLLLEDDIEVSPYYYLWIKYALLAYRY 712
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: D8SMW5_SELML (Uncharacterized protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SMW5_SELML) HSP 1 Score: 143 bits (361), Expect = 3.100e-36 Identity = 65/144 (45.14%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 133 SLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
+L+++PR ++HA WMA L P + W + ++++T NR+ L RL +SL +A YLGD++ + F++D D + + AF WPHG K + RR+ GGLI AV+ES++PA H+Y +LLE+D+EVSP YY W+K+ALL Y Y
Sbjct: 569 TLVELPRPSIQHALWMADLKPISLQQWNKMTIVVNIITQNRVGSLNRLLQSLASAHYLGDKIHMTFNMDSKVDAPTLELVHAFQWPHGRKIVRRRIIPGGLIRAVSESWYPAHDHEYGLLLEDDIEVSPFYYMWLKYALLTYVY 712
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Match: A0A6A4LXY1_9ERIC (Uncharacterized protein (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4LXY1_9ERIC) HSP 1 Score: 143 bits (361), Expect = 3.100e-36 Identity = 64/145 (44.14%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 130 TSLLQVPRNDLRHAAWMAGLTPDMVAAWQIPEVSLHVVTNNRLLGLRRLCRSLLAARYLGDRVAVHFHVDVDADDALTDYLLAFPWPHGPKEIHRRVRRGGLIAAVTESFHPATPHQYAVLLEEDVEVSPLYYSWVKHALLRYRY 564
T+L+ +PRN + A WMA L P + W ++S++++T NR+ L RL SL A YLGD V + F++D D + ++ +F W HGPK + RR+ +GGLI AV+ES++P++ + + +LLE+D+EVSP YY W+K+ALL Y Y
Sbjct: 572 TTLVLLPRNSVGKALWMADLRPTALPNWNKMQISINIITQNRVHSLTRLLNSLSNAYYLGDHVPITFNMDTKVDASTIKFINSFNWTHGPKTLRRRIIQGGLIRAVSESWYPSSDNDFGLLLEDDIEVSPFYYLWIKYALLAYHY 716 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15285.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15285.1.1 >prot_P-wetherbeei_contig15285.1.1 ID=prot_P-wetherbeei_contig15285.1.1|Name=mRNA_P-wetherbeei_contig15285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp SGGRGHGNGTGGARSHAASTYATSYSYGGHGGGAPGAPFRPAATSLLQVPback to top mRNA from alignment at P-wetherbeei_contig15285:352..1468- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15285.1.1 ID=mRNA_P-wetherbeei_contig15285.1.1|Name=mRNA_P-wetherbeei_contig15285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1117bp|location=Sequence derived from alignment at P-wetherbeei_contig15285:352..1468- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15285:352..1468- >mRNA_P-wetherbeei_contig15285.1.1 ID=mRNA_P-wetherbeei_contig15285.1.1|Name=mRNA_P-wetherbeei_contig15285.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig15285:352..1468- (Phaeothamnion wetherbeei SAG_119_79)back to top |