mRNA_P-wetherbeei_contig15229.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15229.1.1
Unique NamemRNA_P-wetherbeei_contig15229.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A7Y5DD94_9BACT (Tetratricopeptide repeat protein n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=A0A7Y5DD94_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 2.390e-13
Identity = 51/210 (24.29%), Postives = 88/210 (41.90%), Query Frame = 1
Query:   10 YKSGWIENEREQFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKRRAPELSRKLQAEIN 639
            Y+ G+ EN  + + +A   L K+  IK D    Y+++GFAY++L++ D+AI  F KA  I+      ++G+ +VY D K++   A  +YQK+     ++   NY LG C     K+                                            L  +P+N  A ++ G   ++Q     A   V+ LK    + +  LQ ++N
Sbjct:  166 YRKGFTENALKDYTAAQASLLKSLNIKTDYINTYLELGFAYTKLKQDDDAINYFKKAIDIDPKSHIPYNGIAEVYRDNKKNMTEAIAWYQKSLTINPNERKANYGLGYCSNSLGKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQNPKNENARYYSGLVYIIQKDRINAQRMVDELKNLNSKNATSLQDKVN 375          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A537KKV1_9BACT (Tetratricopeptide repeat protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A537KKV1_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 7.830e-10
Identity = 48/218 (22.02%), Postives = 97/218 (44.50%), Query Frame = 1
Query:    1 EALYKSGWIENEREQFASALTFLEKA----RRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPV-VNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKRRAPELSRKLQAEIN 639
            +A Y++GW  NE E + +A+  L+K      + K ++S    ++GF+Y +L+++ EAI  +     ++     A  GLG+VY+++++DY +A +Y++KA     ++   V Y+LG  Y +                        + ELG                     +D  +   +++ G   +   + G A++    LK    + +++L  +IN
Sbjct:   59 DAYYQAGWCCNELEDYENAIDLLKKYMPSDEKNKKNKSN---ELGFSYYKLQKSTEAIIEYKNTIALSPNDGIALRGLGNVYYEIEEDYDSAIEYFEKAVKEDEEESKPVYYKLGWLYNDKXXXXXXXXXXXXXXXXXXXDSGNREELGXXXXXXXXXXXXXXXXXXXXALDDVSKLGYYYKGLCFVATNRKGEAMSMYYKLKELDADGAKELMDKIN 273          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A4Q1CFG6_9BACT (Tetratricopeptide repeat protein n=3 Tax=Lacibacter TaxID=649461 RepID=A0A4Q1CFG6_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 1.620e-7
Identity = 34/125 (27.20%), Postives = 59/125 (47.20%), Query Frame = 1
Query:    4 ALYKSGWIENEREQFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQKFEEAEPYL 378
            A Y+ GW  NE +Q+  A                          +L + + A+  F++  Q+N    KA+   GD+Y D++++  AA   + KA+   + +  ++YR+G CY +  K+ EA PYL
Sbjct:   62 AHYELGWCYNEMQQYEQAXXXXXXXXXXXXXXXXXXXXXXXXXYKLGKTEVALQNFNRVLQMNGSFTKAYIARGDLYKDVQKNTNAALTDFLKAFSIDSTEKKLHYRIGWCYNDLGKYNEALPYL 186          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A7R9G9C3_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9G9C3_9CRUS)

HSP 1 Score: 61.2 bits (147), Expect = 2.310e-7
Identity = 56/206 (27.18%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   40 EQFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWH------GLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGL-CYEENQKFEEAEPYLRRV------ADRVLGFV----PGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRA---LNEVEALKR 597
            E+   A  +L KA  I  +    ++  G A++     D++++A+ KA  I     K  H      GLG   ++  + Y  A +++  A     +DP V + LG+ CY E QK+ +AE Y+R+       ++R   F     P    LG     L  ++ A   + RAL + P+N   +  LG  +  +GQ   A   L++  AL+R
Sbjct:  403 EKLDLARRYLLKATTIDKNNGAAWLMFGHAFAVDSEHDQSMSAYYKAHHI----MKGCHLPLLYVGLG---YENSKSYALANEFFVDALAIAPNDPFVLHELGVVCYRE-QKYVQAEKYMRKALAQVDRSNRATPFPEKWEPLLNNLGHVCRKLEKFEEAAQFHCRALSVKPKNASTYAALGYLMAWKGQLWNAASMLHQALALRR 600          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A523XJ89_9BACT (Tetratricopeptide repeat protein n=2 Tax=root TaxID=1 RepID=A0A523XJ89_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 5.360e-7
Identity = 45/160 (28.12%), Postives = 76/160 (47.50%), Query Frame = 1
Query:   34 EREQFASALTFLEKARRIKNDE-SGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPEN 510
            ERE   +   FL+     KN E  G +  +GF Y +L   D A  ++ K  +++S    A++ LG +Y +     + A      A    + +      LG  Y + + +E+A+  L +  +R    V  +  LG  Y  L D + AR+ ++RAL++DPEN
Sbjct:  404 EREYLMAKSLFLKSIA--KNPEFPGPWYSLGFVYDKLGDLDSAEYSYRKLIELDSMNADAFNALGYLYVEHNMKLEEAKGLITHALLIDSLNGYYIDSLGWLYFKLKNYEKAKELLLKAKERAKDPVIYE-HLGDVYEKLGDKERAREEWQRALELDPEN 560          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: I7LTQ4_TETTS (Tetratricopeptide repeat protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7LTQ4_TETTS)

HSP 1 Score: 58.9 bits (141), Expect = 1.180e-6
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 1
Query:  106 VYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQKFEE 363
            +Y++MG  Y  L ++ +AI  + KA  IN         + ++YF+ +QDYQAA +YY+K    +        RL  CY + QK+++
Sbjct:  268 IYMEMGQIYETLFKSKDAIEQYKKAFDINPNNADPLSKIANIYFEKRQDYQAAIEYYEKIIRIKPSCKTSFIRLAKCYFQLQKYDK 353          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A3N5JZH0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A3N5JZH0_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 1.230e-6
Identity = 38/153 (24.84%), Postives = 76/153 (49.67%), Query Frame = 1
Query:   43 QFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKA----TQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYF--RADDPVVNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYE 483
            Q+A ++   +K   +   E   Y  +G AY  +++   A AA+++A    TQ  + +   +  LG ++   K +Y  A  ++ K       A   ++NY    C  + +K++ A   L++   +   ++P  T LGFCY+ ++D+++ R+ YE
Sbjct:  318 QYAQSIDAYKKIATLDTMEFDDYRWLGMAYRHMKKDSLAAAAWEEALKDTTQPMALRSFLYGELGSIWMYFK-NYDRAADFFLKRVQLDTTAVAALINY--AQCMIQVEKYDLASAALKKAIAQNPKYLPAYTNLGFCYFQMKDFEAGRNEYE 467          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A7V6DFA9_9BACT (Tetratricopeptide repeat protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V6DFA9_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.580e-6
Identity = 47/190 (24.74%), Postives = 85/190 (44.74%), Query Frame = 1
Query:   40 EQFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRADEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKRRAPE 609
            E+ A AL  LE A R + +E+  + +   A ++    + A+A F +A  ++    ++  GL  V  +L +  +AA            +   V  R   C   + +   A+  +   A        G  +LGF  ++  +   AR+R+ +AL+IDP    AH++L    + +G   +A   +EA  R AP+
Sbjct:  215 EKAAQALRDLEAAGR-RAEEAKRFHNEAVALAKAGNKEAALAKFQQALNLDPKLVESQVGLSTVALELGRWGEAADAAEAALKVDPKNGKAVRLRYNACLHLSDRGRLADALVGLAAVEPTVARDGLLKLGFDAYDAGNMAEARERFSKALEIDPNQALAHYYLAIAYINEGALPQARTHLEAFLRLAPD 403          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A350UTT5_9BACT (Uncharacterized protein n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A350UTT5_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 2.100e-6
Identity = 43/155 (27.74%), Postives = 72/155 (46.45%), Query Frame = 1
Query:  151 DEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLC--YEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKRRAPE 609
            DEAI   ++A +IN+    A++  G +Y +  +  +A   Y +       D    + RLGL   Y ++   + A      VA+        Q ++   YW L+D     + Y R ++IDP+++QAH  L          G+A+ E+E +KR A E
Sbjct:   57 DEAIDILNQALEINAKFAPAYYQKGLIYEEWDKRKEALEAYLKAV---ELDPTYDDARLGLASVYGKSVLNDLAVEQYLEVAETRKNDPELQFKIALEYWYLQDIPKTANHYVRVIEIDPKHLQAHLNLISVYERMKNWGKAIEEIEIVKRLAGE 208          
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Match: A0A1Q7MRU2_9BACT (OmpR/PhoB-type domain-containing protein n=1 Tax=Acidobacteria bacterium 13_1_40CM_3_65_5 TaxID=1803450 RepID=A0A1Q7MRU2_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 4.050e-6
Identity = 39/144 (27.08%), Postives = 71/144 (49.31%), Query Frame = 1
Query:  175 KATQINSWQFKAWHGLG--DVYFDLKQDYQAATKYYQKAYYFRADDPVVNYRLGLCYEENQ-KFEEAEPYLRRVADRVLGFVPGQTELGFCYWNLRDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKR 597
            KA Q++S   +A   L   D ++D   D+ AA K +++A     D P+ ++  G+ Y      +++A   L +        +  QT++G+ Y+ +R+YD A   Y+  +K D   + AH+ L       GQ  +AL+E+   +R
Sbjct:  220 KAVQLDSTSAEAHTALAAIDAFYDW--DWLAARKEFERALQLSPDYPLAHHWYGVAYWVPMGSYDQALAQLTQARKLDSQSLIIQTDVGWVYYVMREYDRAIVEYDSVIKRDANFLPAHYMLSLAYERLGQYAQALSELRTSRR 361          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y5DD94_9BACT2.390e-1324.29Tetratricopeptide repeat protein n=1 Tax=Ferrugini... [more]
A0A537KKV1_9BACT7.830e-1022.02Tetratricopeptide repeat protein n=1 Tax=Bacteroid... [more]
A0A4Q1CFG6_9BACT1.620e-727.20Tetratricopeptide repeat protein n=3 Tax=Lacibacte... [more]
A0A7R9G9C3_9CRUS2.310e-727.18Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
A0A523XJ89_9BACT5.360e-728.13Tetratricopeptide repeat protein n=2 Tax=root TaxI... [more]
I7LTQ4_TETTS1.180e-632.56Tetratricopeptide repeat protein n=1 Tax=Tetrahyme... [more]
A0A3N5JZH0_9BACT1.230e-624.84Uncharacterized protein (Fragment) n=1 Tax=Ignavib... [more]
A0A7V6DFA9_9BACT1.580e-624.74Tetratricopeptide repeat protein n=1 Tax=Acidobact... [more]
A0A350UTT5_9BACT2.100e-627.74Uncharacterized protein n=1 Tax=Nitrospina sp. Tax... [more]
A0A1Q7MRU2_9BACT4.050e-627.08OmpR/PhoB-type domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15229contigP-wetherbeei_contig15229:12..665 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog706587.Desti_1441
Preferred nameychJ
PFAMsSEC-C
Model size654
Max annot lvl2|Bacteria
KEGG koko:K09858
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.16e-09
EggNOG OGsCOG0457@1|root,COG3012@1|root,COG0457@2|Bacteria,COG3012@2|Bacteria
Descriptionpeptidyl-tyrosine sulfation
Cds size654
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186048.8608153-CDS-P-wetherbeei_contig15229:11..6651683186048.8608153-CDS-P-wetherbeei_contig15229:11..665Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15229 12..665 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15229.1.1prot_P-wetherbeei_contig15229.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15229 12..665 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15229.1.1

>prot_P-wetherbeei_contig15229.1.1 ID=prot_P-wetherbeei_contig15229.1.1|Name=mRNA_P-wetherbeei_contig15229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp
EALYKSGWIENEREQFASALTFLEKARRIKNDESGVYVDMGFAYSRLRRA
DEAIAAFDKATQINSWQFKAWHGLGDVYFDLKQDYQAATKYYQKAYYFRA
DDPVVNYRLGLCYEENQKFEEAEPYLRRVADRVLGFVPGQTELGFCYWNL
RDYDSARDRYERALKIDPENIQAHFFLGRTLLMQGQSGRALNEVEALKRR
APELSRKLQAEINAGKI*
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mRNA from alignment at P-wetherbeei_contig15229:12..665+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15229.1.1 ID=mRNA_P-wetherbeei_contig15229.1.1|Name=mRNA_P-wetherbeei_contig15229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig15229:12..665+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGCTCTCTACAAGAGCGGTTGGATAGAAAACGAGAGAGAGCAGTTTGC ATCTGCCCTAACCTTCCTCGAAAAGGCCAGGCGAATCAAGAATGATGAAT CGGGCGTCTACGTAGACATGGGCTTTGCCTATAGTCGGCTAAGGCGAGCT GACGAAGCGATCGCCGCATTCGACAAAGCCACCCAGATAAACTCCTGGCA ATTTAAGGCCTGGCACGGCCTCGGCGACGTATATTTCGATCTGAAACAAG ACTACCAGGCCGCCACGAAGTATTATCAAAAGGCCTACTATTTTCGAGCA GATGACCCGGTAGTGAACTACCGGTTGGGTCTCTGCTATGAGGAAAACCA GAAATTTGAAGAGGCGGAGCCCTATCTGAGAAGAGTTGCGGACCGCGTTC TAGGCTTTGTACCTGGCCAAACAGAACTTGGTTTCTGCTATTGGAATTTG CGGGACTATGACTCGGCACGCGATCGATACGAAAGGGCCCTAAAGATAGA CCCCGAAAACATACAAGCTCACTTCTTTCTAGGACGAACACTTCTAATGC AGGGCCAGTCTGGAAGAGCGCTTAATGAGGTCGAAGCCCTTAAACGAAGG GCGCCGGAGTTATCAAGAAAATTGCAAGCAGAAATCAACGCAGGAAAAAT ATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15229:12..665+

>mRNA_P-wetherbeei_contig15229.1.1 ID=mRNA_P-wetherbeei_contig15229.1.1|Name=mRNA_P-wetherbeei_contig15229.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig15229:12..665+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGCTCTCTACAAGAGCGGTTGGATAGAAAACGAGAGAGAGCAGTTTGC
ATCTGCCCTAACCTTCCTCGAAAAGGCCAGGCGAATCAAGAATGATGAAT
CGGGCGTCTACGTAGACATGGGCTTTGCCTATAGTCGGCTAAGGCGAGCT
GACGAAGCGATCGCCGCATTCGACAAAGCCACCCAGATAAACTCCTGGCA
ATTTAAGGCCTGGCACGGCCTCGGCGACGTATATTTCGATCTGAAACAAG
ACTACCAGGCCGCCACGAAGTATTATCAAAAGGCCTACTATTTTCGAGCA
GATGACCCGGTAGTGAACTACCGGTTGGGTCTCTGCTATGAGGAAAACCA
GAAATTTGAAGAGGCGGAGCCCTATCTGAGAAGAGTTGCGGACCGCGTTC
TAGGCTTTGTACCTGGCCAAACAGAACTTGGTTTCTGCTATTGGAATTTG
CGGGACTATGACTCGGCACGCGATCGATACGAAAGGGCCCTAAAGATAGA
CCCCGAAAACATACAAGCTCACTTCTTTCTAGGACGAACACTTCTAATGC
AGGGCCAGTCTGGAAGAGCGCTTAATGAGGTCGAAGCCCTTAAACGAAGG
GCGCCGGAGTTATCAAGAAAATTGCAAGCAGAAATCAACGCAGGAAAAAT
ATGA
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