mRNA_P-wetherbeei_contig15213.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15213.2.1
Unique NamemRNA_P-wetherbeei_contig15213.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7K1BBZ5_9ACTN (PaaI family thioesterase n=2 Tax=root TaxID=1 RepID=A0A7K1BBZ5_9ACTN)

HSP 1 Score: 194 bits (492), Expect = 2.290e-61
Identity = 88/132 (66.67%), Postives = 106/132 (80.30%), Query Frame = 1
Query:    1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
            ++ +  EIN FL  +F GS +GCE VG GWA+A+   +   LRPGGI+SGPTVF  CDAALYYACFT +GIEPM LTSELSIR+LRPA+G  LRARADLHQVGRR+I+G++VAWT    +PVAVAQGTY+RP
Sbjct:   13 SVVSAEEINRFLEAEFPGSSSGCEAVGDGWAIAIARTDRMQLRPGGIVSGPTVFAVCDAALYYACFTRVGIEPMTLTSELSIRFLRPARGAELRARADLHQVGRRAIIGSIVAWTDDPSRPVAVAQGTYMRP 144          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6J6QJU7_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J6QJU7_9ZZZZ)

HSP 1 Score: 168 bits (425), Expect = 3.980e-51
Identity = 79/132 (59.85%), Postives = 103/132 (78.03%), Query Frame = 1
Query:    1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
            ++ +V EINAF+  +F G+ N CEE+  G AVA++ P+  +LRPG IISGPTVF  CDAAL+YA  + IG+EPM LTSE+SIR+LRPA+G+ +RARA L  +G RSIVG+V+A+T    KPVAVAQGTY+RP
Sbjct:   12 SLVSVDEINAFIGGEFGGNQNACEEMAFGMAVAVMYPSTASLRPGKIISGPTVFSICDAALFYASLSAIGMEPMTLTSEMSIRFLRPARGEVIRARARLDSLGTRSIVGSVIAYTDDESKPVAVAQGTYMRP 143          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A4V0WZS5_9ACTN (4HBT domain-containing protein n=9 Tax=root TaxID=1 RepID=A0A4V0WZS5_9ACTN)

HSP 1 Score: 160 bits (405), Expect = 3.860e-48
Identity = 76/132 (57.58%), Postives = 99/132 (75.00%), Query Frame = 1
Query:    1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
            ++ +V E+NAF+   F G+ N CE +    AVA++ P+  +LRPG IISGPTVF  CDAAL+YA  +  G+EPM LTSE+SIR+LRPA+G+ +RARA L+ +G RSIVG+VVA+T    KPVAVAQGTY RP
Sbjct:    8 SLVSVEEMNAFIGGAFGGNQNACEVMSFAMAVAVMYPSVASLRPGKIISGPTVFSICDAALFYAALSATGMEPMTLTSEMSIRFLRPARGEVIRARATLNSIGTRSIVGSVVAYTDDESKPVAVAQGTYARP 139          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: UPI000347F9B6 (PaaI family thioesterase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000347F9B6)

HSP 1 Score: 147 bits (372), Expect = 3.880e-43
Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
            T+PT  ++NA +   F G+GN C E+GPG+A+A    +++ LRPGG +SGPT FG  DAAL+Y  F   G IEPM +TSELSIRYLRPA+G  L ARA +   GRR++VGTV  W    + KP +VAQGTY  P
Sbjct:   10 TLPTADQVNAMIEELFPGTGNTCAEIGPGFALAQRPVDDSMLRPGGFVSGPTQFGLADAALWYMVFAATGRIEPMAMTSELSIRYLRPAQGSVLWARATVESAGRRNVVGTVRVWCDDREHKPTSVAQGTYAMP 143          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6C7E0K0_ILUCY (4HBT domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E0K0_ILUCY)

HSP 1 Score: 147 bits (371), Expect = 5.020e-43
Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 1
Query:    1 TMPTVSE-INAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSIDKPVAVAQGTYVRP 396
            T P  +E I A + R+F+G+GN C EVG  +A+A    + + +RPGG +SGPT FG  DAAL+Y  F  +G IEPM +TSELSIRY+RPA GD L A+A L   GRRS+VGTV  WTT   KP AVAQGTY+ P
Sbjct:    3 TNPVTAEAITAMIDREFSGTGNTCFEVGDDYAIARRDVHTDEIRPGGFVSGPTQFGLADAALWYVTFVGVGRIEPMAMTSELSIRYIRPAVGDVLWAKATLDVAGRRSVVGTVSIWTTDESKPSAVAQGTYMLP 136          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A6N2DQA3_9ACTN (PaaI family thioesterase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DQA3_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 3.290e-41
Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 1
Query:   31 FLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
             + R+F+GS N C E+G G+A+A ++ +  +LRPGG ISGPT FG  DAAL+Y  F  IG IEPM LTSELSIRYLRPA G+ L ARA L   GRR++VGTV  W    D +P A AQGTYV P
Sbjct:    1 MVRREFSGSANECVEIGDGYALARLIASPESLRPGGFISGPTQFGLADAALWYLTFAAIGRIEPMALTSELSIRYLRPAIGEVLWARASLEAAGRRNVVGTVHLWVDDHDHRPTATAQGTYVLP 124          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7Y1ZW90_9ACTN (PaaI family thioesterase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZW90_9ACTN)

HSP 1 Score: 142 bits (358), Expect = 4.070e-41
Identity = 74/132 (56.06%), Postives = 91/132 (68.94%), Query Frame = 1
Query:    7 PTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTS-IDKPVAVAQGTYVRP 396
            PT +E+NA L   F+G+GN C E+GP  A+A+   ++ NLRPGG +SGPT FG  DAAL+Y  F  +G IEPM LTSELSIR+LRPA+G  L ARA L + GRR+IVG+V  W     DK  A AQGTY  P
Sbjct:    4 PTPAEVNAMLDEQFSGTGNSCAELGPTHALAVSDIDQLNLRPGGFVSGPTQFGLADAALWYLVFGALGRIEPMSLTSELSIRFLRPAQGSRLWARATLEKAGRRNIVGSVHLWCDDRTDKITATAQGTYALP 135          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7W0R068_9ACTN (PaaI family thioesterase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R068_9ACTN)

HSP 1 Score: 138 bits (347), Expect = 1.970e-39
Identity = 75/132 (56.82%), Postives = 86/132 (65.15%), Query Frame = 1
Query:   10 TVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTT--SIDKPVAVAQGTYVRP 396
            TV  +N  + + F GS N C E+G G+AVA  L     LRPGG ISGPT FG  DA L+Y  F  IG IEPM LTSELSIR+LRPA G+ L ARA L   GRR++VGTV  WT   +  KP A AQGTYV P
Sbjct:    5 TVDAVNEMVRQQFPGSTNECTELGDGFAVARRLITPIELRPGGYISGPTQFGLADAGLWYLVFAAIGRIEPMALTSELSIRFLRPAIGEVLWARARLDAAGRRNVVGTVRLWTDGGTESKPTATAQGTYVLP 136          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A349B1U1_9ACTN (4HBT domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B1U1_9ACTN)

HSP 1 Score: 137 bits (346), Expect = 3.450e-39
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   10 TVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSI-DKPVAVAQGTYVRP 396
            +++ ++A L  +F G+GN C E+GP  AVA    +   +RPGG +SGPT FG  DAAL+Y  F  IG IEPM LTSELSIR+LRPA+G  L ARA L   G RSIVG+V  W     DKP AVAQGTYV P
Sbjct:   11 SLAGVDAMLEAEFPGTGNSCTELGPTHAVARRPVDAGAIRPGGFVSGPTQFGLADAALWYLAFGAIGRIEPMALTSELSIRFLRPAQGSMLWARATLESAGSRSIVGSVKVWCDDREDKPSAVAQGTYVLP 141          
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Match: A0A7V9IK79_9ACTN (PaaI family thioesterase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IK79_9ACTN)

HSP 1 Score: 137 bits (346), Expect = 3.780e-39
Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 1
Query:    1 TMPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGPTVFGACDAALYYACFTVIG-IEPMVLTSELSIRYLRPAKGDALRARADLHQVGRRSIVGTVVAWTTSID-KPVAVAQGTYVRP 396
            T+P+  EIN      F GS N C E+G  +AVA ++   + +RPGG +SGP  FG  DAAL+Y  F  IG +EPM LTSELSIR+LRPA GD +RARA L    RRS+VG+V  W   ++ +P AVAQGTY  P
Sbjct:    8 TLPSPDEINEMARESFPGSPNTCLELGEDYAVAEMIVTPDMIRPGGFVSGPGQFGLADAALWYLVFAAIGRVEPMALTSELSIRFLRPAVGDRMRARAALEARSRRSVVGSVRVWAGDLEHRPTAVAQGTYALP 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15213.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1BBZ5_9ACTN2.290e-6166.67PaaI family thioesterase n=2 Tax=root TaxID=1 RepI... [more]
A0A6J6QJU7_9ZZZZ3.980e-5159.85Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A... [more]
A0A4V0WZS5_9ACTN3.860e-4857.584HBT domain-containing protein n=9 Tax=root TaxID=... [more]
UPI000347F9B63.880e-4353.73PaaI family thioesterase n=1 Tax=Ilumatobacter non... [more]
A0A6C7E0K0_ILUCY5.020e-4355.974HBT domain-containing protein n=1 Tax=Ilumatobact... [more]
A0A6N2DQA3_9ACTN3.290e-4158.06PaaI family thioesterase n=1 Tax=Ilumatobacter sp.... [more]
A0A7Y1ZW90_9ACTN4.070e-4156.06PaaI family thioesterase n=1 Tax=Ilumatobacter sp.... [more]
A0A7W0R068_9ACTN1.970e-3956.82PaaI family thioesterase n=1 Tax=Acidimicrobiia ba... [more]
A0A349B1U1_9ACTN3.450e-3955.734HBT domain-containing protein n=1 Tax=Acidimicrob... [more]
A0A7V9IK79_9ACTN3.780e-3952.24PaaI family thioesterase n=2 Tax=Acidimicrobiia ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15213contigP-wetherbeei_contig15213:947..1348 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_01990
Preferred nameMA20_36950
PFAMs4HBT
Model size402
Max annot lvl2|Bacteria
KEGG koko:K17362
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-43
EggNOG OGsCOG2050@1|root,COG2050@2|Bacteria
Descriptionthiolester hydrolase activity
Cds size399
COG categoryQ
BRITEko00000,ko01000,ko01004
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186048.5046904-UTR-P-wetherbeei_contig15213:946..9491683186048.5046904-UTR-P-wetherbeei_contig15213:946..949Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15213 947..949 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186048.52393-CDS-P-wetherbeei_contig15213:949..13481683186048.52393-CDS-P-wetherbeei_contig15213:949..1348Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15213 950..1348 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15213.2.1prot_P-wetherbeei_contig15213.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15213 950..1348 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15213.2.1

>prot_P-wetherbeei_contig15213.2.1 ID=prot_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MPTVSEINAFLARDFAGSGNGCEEVGPGWAVALILPNENNLRPGGIISGP
TVFGACDAALYYACFTVIGIEPMVLTSELSIRYLRPAKGDALRARADLHQ
VGRRSIVGTVVAWTTSIDKPVAVAQGTYVRPA*
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mRNA from alignment at P-wetherbeei_contig15213:947..1348+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15213.2.1 ID=mRNA_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig15213:947..1348+ (Phaeothamnion wetherbeei SAG_119_79)
ACGATGCCCACCGTCTCCGAGATCAACGCGTTCCTCGCTCGCGACTTCGC CGGCAGCGGCAACGGGTGCGAGGAGGTCGGGCCGGGCTGGGCCGTGGCGT TGATCCTGCCGAACGAGAACAACCTCCGGCCCGGCGGGATCATCAGCGGA CCCACCGTCTTCGGGGCATGCGACGCGGCGCTCTACTACGCCTGCTTCAC CGTCATCGGCATCGAGCCGATGGTGCTCACCAGCGAACTGTCGATCCGCT ACCTGCGCCCGGCGAAGGGCGACGCGCTGCGCGCGCGGGCCGACCTGCAC CAGGTGGGTCGGCGGTCGATCGTCGGCACGGTGGTCGCGTGGACGACGTC GATCGACAAGCCGGTCGCCGTCGCCCAGGGCACGTACGTGCGCCCTGCCT GA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15213:947..1348+

>mRNA_P-wetherbeei_contig15213.2.1 ID=mRNA_P-wetherbeei_contig15213.2.1|Name=mRNA_P-wetherbeei_contig15213.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig15213:947..1348+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCACCGTCTCCGAGATCAACGCGTTCCTCGCTCGCGACTTCGCCGG
CAGCGGCAACGGGTGCGAGGAGGTCGGGCCGGGCTGGGCCGTGGCGTTGA
TCCTGCCGAACGAGAACAACCTCCGGCCCGGCGGGATCATCAGCGGACCC
ACCGTCTTCGGGGCATGCGACGCGGCGCTCTACTACGCCTGCTTCACCGT
CATCGGCATCGAGCCGATGGTGCTCACCAGCGAACTGTCGATCCGCTACC
TGCGCCCGGCGAAGGGCGACGCGCTGCGCGCGCGGGCCGACCTGCACCAG
GTGGGTCGGCGGTCGATCGTCGGCACGGTGGTCGCGTGGACGACGTCGAT
CGACAAGCCGGTCGCCGTCGCCCAGGGCACGTACGTGCGCCCTGCCTGA
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