mRNA_P-wetherbeei_contig15200.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: D7FYU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU9_ECTSI) HSP 1 Score: 157 bits (397), Expect = 1.600e-40 Identity = 95/246 (38.62%), Postives = 145/246 (58.94%), Query Frame = 1
Query: 4 SILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRH-ETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQSMLDNEQN-KAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETLTHYLEHGTLAVDPKGAAGELFPGVSLLAGIL 735
++LWA ++AQAL S K + + + LS+E DA + M+ VLW+ + F + H + +Y ++ + LD I FA+VG +S S V + ++ +V L GLLY+LDR +F YRR+VSD T+A +I FF+SVSFI+LFLG ES+LEG++ STW+Q+MLD E N ++EW + R +FA ET + Y T W+P+ +++Y EHG L + E P ++G+L
Sbjct: 37 TLLWAFILAQALHSPKAKLIRAIKVLSQE-DA--RPMVFVLWDMMAGPFRRMHADGRPVYEMVFVWALDWCIESFALVGLISCTSR-VSVGLLVATSLVALLCY-GLLYVLDRRVFAYRRVVSDNTVACTLLITTFFASVSFIVLFLGLESVLEGLSAGKDVSTWIQTMLDIESNSESEWGKNFVRVTEFAQETASGLASKYNETAWYPVAQNAISNYFEHGALTAPTETCTDE--PTGGAVSGLL 275
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: K3WJZ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJZ1_GLOUD) HSP 1 Score: 108 bits (269), Expect = 3.320e-23 Identity = 73/241 (30.29%), Postives = 118/241 (48.96%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETLTHYLEHGTLAVDPKGAAGELFPGVSL 720
R I+WA++ +QAL+ AK + L LS + D + LT ++ F K H E L+ GI LF+++GA+S+ + + ++ L+ +LDR IF YR +SDE L SM +I FF++ F++L+LGTES LEG S W+Q + +++E+ + W+ Q+S + + +Y T+WWP + + Y +D K G VSL
Sbjct: 37 RLIVWAILFSQALRQAKNNVVSVLQYLSDDPDVDKYGFLTCVFSKSCEIFFK-HPHDGSRRTAKELFLNYGIFLFSLIGAVSIWLRMYSWMSFLNLAIGFWIVMLSLIKILDRRIFYYRYFISDEVLVSMLLILGFFATGIFVVLYLGTESYLEGSRAASDLSDWIQKNFINDERTRQMWSEQVSNSRAMVSTALSGIENTYNDTMWWPPLKSVVKSYY------LDSKVGDGNSTNQVSL 270
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: A0A225WY67_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WY67_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.780e-23 Identity = 81/254 (31.89%), Postives = 121/254 (47.64%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSL----------LSHFVPLWFIILCGVVLLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWP-LVNETLTHYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ F H EF L+ GI LF++VGA+S+ L+ + W ++L L+ +LDR IF YR SDE L S +I FF + +F+ILFLGTES LEG S WVQ + +++E+ + W+ Q+ + + V +Y T+WWP L T+YL D K + G + SL +
Sbjct: 37 RLIVWAILCSQALRQAKNNVISVLQYLSNDADVDRYGFLTCVFSKSAEIFVS-HPHDGSRRTAKEFFLNYGIFLFSLVGAVSIWMRMYSWVSFLNVIIGFWIVVL----------SLIKILDRRIFYYRYFFSDEVLVSTLLILGFFITGAFVILFLGTESYLEGSRAATDLSGWVQDNFVNDERTRQVWSEQVENSRAMISQAISGVENNYNDTMWWPPLKGLVKTYYL-------DAKSSDGNITSHASLFS 272
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: H3GCH3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCH3_PHYRM) HSP 1 Score: 105 bits (261), Expect = 3.830e-22 Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIG-------LLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETL-THYLE 657
R I+WA++ +QAL+ AK + L LS + D LT ++ F H E L+ GI LF++VGA+S+ W + V L +IG L+ +LDR IF YR SDE L S+ +I FF + +F++LFLGTES LEG S WVQ + +++E+ + W+ Q+ + + V ++Y T+WWP + + T+YL+
Sbjct: 37 RLIVWAILCSQALRQAKNNVISVLQYLSDDADVDRYGFLTCVFSKSAEIFIS-HPNGGSRRTAKELFLNYGIFLFSLVGAVSI-------WMRMFSWVSFLNVIIGFWIAALSLIKILDRRIFYYRYFFSDEVLVSVVLILGFFITGAFVVLFLGTESYLEGSRAATDLSDWVQDNFINDERTRQVWSEQVENSRAMISQAISGVEDNYNDTMWWPPLKSLVKTYYLD 256
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: A0A3F2S4D9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4D9_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.950e-22 Identity = 80/251 (31.87%), Postives = 122/251 (48.61%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIG-------LLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETL-THYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ F H E L+ GI LF+++GA+S+ W + V L +IG L+ +LDR IF YR SDE L S+ +I FF + +F+ILFLGTES LEG S WVQ + +++E+ + W+ Q+ + + V ++Y T+WWP + + T+YL D K + G SL +
Sbjct: 37 RLIVWAILCSQALRQAKNNVVSVLQYLSDDADVDRYGFLTCVFSKSAEIFIS-HPHDGSRRTAKELFLNYGIFLFSLIGAVSI-------WMRMYSWVSFLNIIIGFWIMALSLIKILDRRIFYYRYFFSDEVLVSVLLILGFFITGAFVILFLGTESYLEGSRAATDLSDWVQDNFINDERARQVWSEQVENSRTMISQAISGVEDNYNDTMWWPPLKSVVKTYYL-------DAKSSDGNATSHASLFS 272
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: A0A024FZ86_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ86_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.980e-22 Identity = 76/246 (30.89%), Postives = 121/246 (49.19%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSL----------LSHFVPLWFIILCGVVLLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQS-MLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETLTHYL-------EHGTLAVDPK 684
R I+WA++ +QAL+ AK +E L LS + E LT L ++S T + E VL+ G+ LF+++GA+S+ L++ + W + L L+ +L+R +F YR +SDE L S +I FF + + +I++LGTES LEG A S W+Q+ ++E+ K W++Q+ + H V SY T+WWP V + Y +GTL+ K
Sbjct: 37 RLIIWAILFSQALRQAKNNFIEILQYLSDDPAVPEDGFLTSLV--IKSCETFLRHPTGMKRSAKEMVLNYGVFLFSLIGAISMWLRVASWMTFLNYCIGFWIVTL----------SLIKILERRLFYYRYFISDEVLVSTLLILGFFITGTCVIIYLGTESYLEGSRAAVALSNWLQANFFNDERTKQLWSQQMETSRTMIHSAITGVEHSYNETMWWPPVKSIVKTYFFDIKTGSGNGTLSTASK 270
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: D0N343_PHYIT (Uncharacterized protein n=27 Tax=Phytophthora TaxID=4783 RepID=D0N343_PHYIT) HSP 1 Score: 104 bits (259), Expect = 8.000e-22 Identity = 75/244 (30.74%), Postives = 119/244 (48.77%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVV-LLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETLTHYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ +G H E L+ GI LF+++GA+S+ W L ++ + L+ +LDR IF YR SDE L S+ +I FF + +F+ILFLG+ES LEG S WVQ + +++E+ + W+ Q+ + + V + Y T+WWP + + Y VD K + G + SL +
Sbjct: 37 RLIVWAILCSQALRQAKNNVVSVLEYLSDDADVERYGFLTCVFSK-STGIFISHPHDGSRRTAKEIFLNYGIFLFSLIGAVSIWMRMYS-WMSFLNIIIGFWIAALSLIKILDRRIFYYRYFFSDEVLVSVLLILGFFITGAFVILFLGSESYLEGSRAATDLSDWVQVNFINDERTRQVWSEQVENSRAMISQAVSGVEDKYNDTMWWPPLKSLVKTYY------VDAKSSDGNVTSHTSLFS 272
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: A0A662YBH3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBH3_9STRA) HSP 1 Score: 104 bits (259), Expect = 8.430e-22 Identity = 80/251 (31.87%), Postives = 121/251 (48.21%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIG-------LLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETL-THYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ F H E L+ GI LF+++GA+S+ W + V L +IG L+ +LDR IF YR +SDE L S +I FF + F++L+LGTES LEG S WVQ + +++E+ + W+ Q+ + E V +Y T+WWP + + T+YL D K + G L SL +
Sbjct: 399 RLIVWAILFSQALRQAKNNVISVLQYLSDDADVDRYGFLTCVFSKSAEIFIS-HPHDGSRRSAKELFLNYGIFLFSLIGAVSI-------WMRMYSWVSFLNVIIGFWIVSLSLIKILDRRIFYYRYFISDEVLVSALLILGFFVTGVFVVLYLGTESYLEGSRAATDLSDWVQENFINDERTRQIWSEQVENSRAMISEAISGVEVNYNDTMWWPPLKSLVKTYYL-------DAKSSDGNLTSHTSLFS 634
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: A0A833TEV8_PHYIN (AI-2E family transporter n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TEV8_PHYIN) HSP 1 Score: 104 bits (259), Expect = 8.610e-22 Identity = 75/244 (30.74%), Postives = 119/244 (48.77%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVV-LLAPLIGLLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWPLVNETLTHYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ +G H E L+ GI LF+++GA+S+ W L ++ + L+ +LDR IF YR SDE L S+ +I FF + +F+ILFLG+ES LEG S WVQ + +++E+ + W+ Q+ + + V + Y T+WWP + + Y VD K + G + SL +
Sbjct: 424 RLIVWAILCSQALRQAKNNVVSVLEYLSDDADVERYGFLTCVFSK-STGIFISHPHDGSRRTAKEIFLNYGIFLFSLIGAVSIWMRMYS-WMSFLNIIIGFWIAALSLIKILDRRIFYYRYFFSDEVLVSVLLILGFFITGAFVILFLGSESYLEGSRAATDLSDWVQVNFINDERTRQVWSEQVENSRAMISQAVSGVEDKYNDTMWWPPLKSLVKTYY------VDAKSSDGNVTSHTSLFS 659
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Match: G4YV27_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YV27_PHYSP) HSP 1 Score: 103 bits (258), Expect = 1.090e-21 Identity = 81/251 (32.27%), Postives = 120/251 (47.81%), Query Frame = 1
Query: 1 RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFAKRHETTSLYVIILEFVLDNGISLFAVVGALSLLSHFVPLWFIILCGVVLLAPLIG-------LLYLLDRSIFCYRRLVSDETLASMFVIGVFFSSVSFIILFLGTESILEGITVWGAASTWVQ-SMLDNEQNKAEWARQISRANKFAHETFDSVGESYGGTVWWP-LVNETLTHYLEHGTLAVDPKGAAGELFPGVSLLA 726
R I+WA++ +QAL+ AK + L LS + D LT ++ F H E L+ GI LF+++GA+S+ W + V L +IG L+ +LDR IF YR SDE L S+ +I FF + +F+ILFLGTES LEG S WVQ + +++E+ + W+ Q+ + + V +Y T+WWP L T+YL D K + G SL +
Sbjct: 37 RLIVWAILCSQALRQAKNNVISVLQYLSDDADVDRYGFLTCVFSKSAEIFIS-HPHDGSRRTAKELFLNYGIFLFSLIGAVSI-------WMRMYSWVSFLNVIIGFWIAALSLIKILDRRIFYYRYFFSDEVLVSVLLILGFFITGAFVILFLGTESYLEGSRAATDLSDWVQENFINDERTRQVWSEQVENSRAMISQAISGVENNYNDTMWWPPLKGLVKTYYL-------DAKSSDGNATAHTSLFS 272 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15200.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15200.1.1 >prot_P-wetherbeei_contig15200.1.1 ID=prot_P-wetherbeei_contig15200.1.1|Name=mRNA_P-wetherbeei_contig15200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp RSILWAVVIAQALQSAKQRTMECLAALSREEDAAEKSMLTVLWEDLRSGFback to top mRNA from alignment at P-wetherbeei_contig15200:404..1551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15200.1.1 ID=mRNA_P-wetherbeei_contig15200.1.1|Name=mRNA_P-wetherbeei_contig15200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1148bp|location=Sequence derived from alignment at P-wetherbeei_contig15200:404..1551- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15200:404..1551- >mRNA_P-wetherbeei_contig15200.1.1 ID=mRNA_P-wetherbeei_contig15200.1.1|Name=mRNA_P-wetherbeei_contig15200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig15200:404..1551- (Phaeothamnion wetherbeei SAG_119_79)back to top |