mRNA_P-wetherbeei_contig15166.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A0A835ZPQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPQ0_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.240e-92 Identity = 147/239 (61.51%), Postives = 181/239 (75.73%), Query Frame = 1
Query: 1 AARLGSADA-HWCAVLDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFKPKEINDVWAGQVI 714
AAR+G AD H+ + DAVVV+ ERM FS V GVL L L+++DLD V VY+ GAV+ G+L+T GLE V C LPGGKLG+KMELNGGG FTGVLD+GSNSS GNWAAARDLDV+ L +AS YP+ETGR RPLFKA FDTVQ+GHVLL++ +A +GRL +Y+G+LPEFD L D+ G D +RQLA+VGLDLLG++R+V+S KSK++FFK KE+NDVWAGQV
Sbjct: 135 AARIGRADRPHFFTICDAVVVDTERMQFSSAVDGVLALAFLANYDLDIQMNAGKVDVYLQGAVDSGMLNTEGLEEVRCNTLPGGKLGVKMELNGGGVFTGVLDMGSNSSVGNWAAARDLDVSELFLQDASRYPQETGRLRPLFKACFDTVQVGHVLLSNVP---DAQTDAQGRLSMYVGYLPEFDLLQEDIRGTRDPARQLALVGLDLLGNTRIVISVKSKRIFFKAKELNDVWAGQVF 370
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: D7FPW9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW9_ECTSI) HSP 1 Score: 276 bits (706), Expect = 2.780e-88 Identity = 140/240 (58.33%), Postives = 184/240 (76.67%), Query Frame = 1
Query: 1 AARLGSADA-HWCAVLDAVVVNLERMG-FSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFKPKEINDVWAGQVI 714
AAR+G H+ V+DAVV N E++ GGVLGLD L+ +DLD +F + R Y+AGAV++GL+DT+ LEG+ CG LPGGKL IKMELNGGG FTGVLD+ S+++ GNW AARDLDVT++ +G++SSYP+ETGRS PL A FDT+QLGHVLLAS +A A EGRL VY+GHLP FD+++ D++ + +SRQLA+VG DL+G +R+VLSC+SK+L+F P E ND+WAGQV+
Sbjct: 187 AARIGHEHGDHYLLVMDAVVANSEQVKVLGPNTGGVLGLDFLNRYDLDLNFETNEARFYVAGAVDQGLVDTSLLEGLKCGSLPGGKLAIKMELNGGGPFTGVLDLASSTTVGNWLAARDLDVTSMASGQSSSYPQETGRSLPLMCAQFDTIQLGHVLLASVV---DAKTASEGRLAVYVGHLPVFDSIARDISIREPRSRQLALVGQDLIGHTRIVLSCRSKRLYFAPLEANDIWAGQVV 423
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: C1FGK3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FGK3_MICCC) HSP 1 Score: 89.7 bits (221), Expect = 4.240e-17 Identity = 72/215 (33.49%), Postives = 94/215 (43.72%), Query Frame = 1
Query: 43 LDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDV---TTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFKP 678
LDAVV +L G VGG+LGLD LS F+L+ DF +R + G+V G LD L + P G + LNG F G+LD+GS S NW AA V +V A + GR + A FD G T E E + +G LP F +L A + VGLD+LG R VLS + ++ P
Sbjct: 208 LDAVVTDLAASGLPSVVGGMLGLDFLSRFELELDFADKAMRFHPIGSVATGALDVDSLVHIPLARHPTGLRTVSCRLNGCERFPGILDMGSFFSVCNWMAAARAGVGPDNPVVKNAAMTAVGVDGRPMAMSTAPFDLEVCG-----DGTDEGGQGLRSEYKGECCVGDLPAFASLGATAS-------PFMTVGLDVLGRGRSVLSVGADAVYLTP 410
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A0A1Y5IC47_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IC47_OSTTA) HSP 1 Score: 84.7 bits (208), Expect = 2.230e-15 Identity = 63/218 (28.90%), Postives = 98/218 (44.95%), Query Frame = 1
Query: 40 VLDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRE--------TGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLF 669
VLDAVV +L +G +GG+LGLD LS F+++F+F S ++ + G++ G +DT L + + P G +K LN F ++D+GS S NW A+ TT G S + G S + A FD +G S T +G LP F+ L A V+ + +GLD++G R+V + ++
Sbjct: 202 VLDAVVTDLSAVGLPPQIGGLLGLDFLSKFEIEFNFTDSALKFWPKGSIANGAVDTDDLVKIPLHLHPVGLRTVKCSLNNSAPFDAIVDMGSFFSVANWMAS-----TTAGIGPDSPEVKRGGLQVSGVDGGSMQMAMAPFDLRVIGEAEDLSSTYRGMCC----------VGDLPAFNALGASVS-------PMMALGLDVIGRGRMVFNASDNCMY 397
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A0A7S0KJS2_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KJS2_9CHLO) HSP 1 Score: 84.3 bits (207), Expect = 3.250e-15 Identity = 67/217 (30.88%), Postives = 98/217 (45.16%), Query Frame = 1
Query: 43 LDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDV---TTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFKPKE 684
LDAVV +L +G +GG+LGLD L F ++FDF S + + GAVE G +D L + P G +++ LNG F+ ++D+GS S NW A+ + + V G+S + A FD LG E + + +G +G LP F+ L A V S +AM GLD++G R V L+ E
Sbjct: 217 LDAVVTDLTAVGLPPVIGGLLGLDFLGKFVVEFDFSSSKLSFWPLGAVENGAVDVDDLVKIPMTTHPVGLKTVQVSLNGAAPFSAIVDMGSFFSVANWIASASAGIGPDSDKVKRGGLQVSGVDGQSMNMAMAPFDLRVLG------EPGGDDLSSVYKGMC--CVGDLPAFNALGASV------SPFMAM-GLDVIGRGRCVFDASKNVLYLAKGE 418
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A4S210_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S210_OSTLU) HSP 1 Score: 84.0 bits (206), Expect = 4.340e-15 Identity = 70/235 (29.79%), Postives = 107/235 (45.53%), Query Frame = 1
Query: 7 RLGSADAHWCAVLDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRE--------TGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFKPKEI 687
RLGS + VLDAVV +L +G T+GG+LGLD L +F+++FDF +SV+ + G+V+ G + L V P G ++ LNG ++D+GS S NW A+ TT G S + G+S + A +D LG E + +G IG LP F L A V+ +GLD++G R+V + K ++ ++
Sbjct: 204 RLGSKEF----VLDAVVTDLTAVGLPATIGGLLGLDWLGNFEVEFDFEQSVITFWPPGSVKNGAVAVEDLVRVRLNQHPVGLKTVRCSLNG-AELDAIVDMGSFFSVVNWMAS-----TTAGIGPDSDKVKRGGLQVTGVDGKSMAMAMAPYDLRVLGD-------GEEDLTSTYQGMC--CIGDLPAFAALGASVS-------PFMALGLDVIGRGRMVFNAKDNAMYLSKGDV 412
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: K8EXN0_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EXN0_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 2.010e-10 Identity = 55/185 (29.73%), Postives = 83/185 (44.86%), Query Frame = 1
Query: 43 LDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAAR---------DLDVTTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLH--VYIGHLPEFDTLSA 564
LDAVV +L G VGG+LGLD L F+++FDF + ++ + G+ G+ D + L + P G + LN F ++D+GS S NW A+ DLD + +++ + TG L F+ LG E ++ A LE +G LP F+TL A
Sbjct: 235 LDAVVTDLRSTGLPPVVGGLLGLDFLKRFEVEFDFDKEIIAFHPKGSAITGVCDVSELIKIRLKTHPTGLQLAPISLNNCAPFDAIIDMGSLFSVINWKASERAGVTKDSPDLDSSGVISNDV------TGAQMGLAIGKFNLRVLG------EGGNSDLAHDLESTYKGAACVGDLPAFETLGA 407
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A0A2K1KCK5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KCK5_PHYPA) HSP 1 Score: 68.2 bits (165), Expect = 1.240e-9 Identity = 57/232 (24.57%), Postives = 103/232 (44.40%), Query Frame = 1
Query: 34 CAVLDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVA------------------CGVLPGGKLGIKMELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRETGRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVLSCKSKKLFFK 675
C ++ ++++L G +V G++GL+ LS FD++FDF + + +Y AGAVERG GL+ +A LPG ++++L GG T ++D+GS+ S A+ T +A A S G+ P +A D +A + + ++ +G LP + ++ ++GL++ +RLVL +K L+ +
Sbjct: 213 CKSVEGIIMDLASTGLPPSVAGIVGLNVLSQFDVEFDFVKEHITLYEAGAVERGQCSQEGLQKLAMIPISFNLQKLAEEPLPMAFTLPG----VQVDLGGGNMQTALIDLGSSLSVTTPDIAKRSGATLEMA--AFSGVGVGGQQMPFSRADMDVTMFN---MAKDKIVFK-------KIPFAVGDLPALRAIECNI-----------ILGLNVFSRTRLVLCMSTKDLYLQ 417
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: A0A0D2JUA4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JUA4_9CHLO) HSP 1 Score: 64.7 bits (156), Expect = 1.550e-8 Identity = 72/224 (32.14%), Postives = 103/224 (45.98%), Query Frame = 1
Query: 43 LDAVVVNLERMGFS---ETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVL-PGGKLGIKMELNGGGF---FTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRET--------GRSRPLFKAHFDTVQLGHVLLASE-------TAEAE-AADALEGRLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVL 645
L+AVV + + + V G+LG++ LS FD DFDFP +R+Y G + AGL + VL G LGI+ G FT +LD G++ SA NWAAA + L +Y R GR P + H +QL + AS+ T EA AA G++ +G LP F L D +G+ + ++GLD+L R +L
Sbjct: 112 LNAVVTSFPQEHLDPAHDPVEGMLGMEMLSLFDADFDFPAGRLRLYKPGEGV-AVAQAAGLVEIPAAVLNESGLLGIRATSPGAPSPQPFTAILDCGASFSAINWAAA---GLAGLPPRGDKAYQRGPQIFSVGVDGRPAP-YPTH--PLQLTYKGDASKDPRTGALTFEAPPAAWRPWGKVDAAVGDLPVFGQLLGDPSGRTPFTGPAVLLGLDVLSQRRTML 328
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Match: B7G487_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G487_PHATC) HSP 1 Score: 61.6 bits (148), Expect = 2.020e-7 Identity = 60/201 (29.85%), Postives = 91/201 (45.27%), Query Frame = 1
Query: 85 ETVGGVLGLDALSSFDLDFDFPRSVVRVYMAGAVERGLLDTAGLEGVACGVLPGGKLGIKM---ELNGGGFFTGVLDVGSNSSAGNWAAARDLDVTTLVAGEASSYPRET-----GRSRPLFKAHFDTVQLGHVLLASETAEAEAADALEG------RLHVYIGHLPEFDTLSADVAGKNDQSRQLAMVGLDLLGDSRLVL 645
+ V G+LG++ALS FD+DFDFP +R + +G G + +E A + G LGI++ E N G LD G+ SA NW+AA+ L + A + + P GR L + +G V S T D ++ + +G LP F +L D G A++GLD+L R++L
Sbjct: 196 DPVEGMLGMEALSLFDVDFDFPAGRIRFWKSGTAA-GAVGNKLVEIPAVVINETGLLGIRLSAPEAN--QPVLGFLDCGATFSAVNWSAAKLLGLPDKGASDYKTGPAIDAIGIDGRPFRLPTIKKELTFVGDVQQDSTTGRPIGFDKPPSSWKPWEKVDLAVGDLPVFPSLLGD--GTRPYMGPAALIGLDVLSQRRVIL 391 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15166.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15166.1.1 >prot_P-wetherbeei_contig15166.1.1 ID=prot_P-wetherbeei_contig15166.1.1|Name=mRNA_P-wetherbeei_contig15166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp AARLGSADAHWCAVLDAVVVNLERMGFSETVGGVLGLDALSSFDLDFDFPback to top mRNA from alignment at P-wetherbeei_contig15166:607..1614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15166.1.1 ID=mRNA_P-wetherbeei_contig15166.1.1|Name=mRNA_P-wetherbeei_contig15166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1008bp|location=Sequence derived from alignment at P-wetherbeei_contig15166:607..1614- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15166:607..1614- >mRNA_P-wetherbeei_contig15166.1.1 ID=mRNA_P-wetherbeei_contig15166.1.1|Name=mRNA_P-wetherbeei_contig15166.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig15166:607..1614- (Phaeothamnion wetherbeei SAG_119_79)back to top |