mRNA_P-wetherbeei_contig15164.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15164.1.1
Unique NamemRNA_P-wetherbeei_contig15164.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15164.1.1 vs. uniprot
Match: A0A8J2YSV1_9PROT (Protein kinase domain-containing protein n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J2YSV1_9PROT)

HSP 1 Score: 54.3 bits (129), Expect = 5.090e-5
Identity = 62/215 (28.84%), Postives = 94/215 (43.72%), Query Frame = 1 
Query:    1 LESALYRLNPDAPCLSPEVQGRWVDTLGDLLDVFEAGLARGNFEP---DAHIVAFLGARGGITAADLGALKTFDGKDPRRAAAIL-KLGVRIYVE-AKGKPL-PNLTKVCHSAAQALIDRLRNPNVRTDQTAKAEAAAAISDIQTLADLATDPDIFGADNAEFMRAKQEFDANQRILNMRDSIVE---TTARM-GSEKGQEISLMILSGLAIVTV 615
            +E   Y   P   CLSP ++GR+VD   DLL   E  +     +    D HI AF+ A     A D   L      DP  AA IL  L +  Y++   G PL P L  +    A+ +I+R ++   R        A    + ++ LAD     D    D   F +A++EF    + L   D   E   +TA++ G     +I+ ++ SG+  VT+
Sbjct:  464 IERVAYETTPGLHCLSPFIEGRYVDRPADLLAAIEFAVQAKTIDIWPIDRHIAAFIAAH--ERAVDDTLLYALVQTDP--AARILGNLQLLAYLQDTYGPPLVPGLILLFGHQAKPVIERFKSRYTRARLQNGLAAVLKENSLRKLADYLDSADEQRRDAQRFQQARREFQQMTKQLEKCDRQEEELHSTAKIAGHSVAVKIAGLVSSGIVAVTL 674
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J2YSV1_9PROT5.090e-528.84Protein kinase domain-containing protein n=1 Tax=A... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15164contigP-wetherbeei_contig15164:977..1633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1121033.AUCF01000028_gene396
PFAMsPkinase
Model size657
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.64e-09
EggNOG OGsCOG0515@1|root,COG0515@2|Bacteria,1R4I9@1224|Proteobacteria,2U0GX@28211|Alphaproteobacteria,2JQ0G@204441|Rhodospirillales
Descriptionserine threonine protein kinase
Cds size657
COG categoryKLT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186046.7295268-CDS-P-wetherbeei_contig15164:976..16331683186046.7295268-CDS-P-wetherbeei_contig15164:976..1633Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15164 977..1633 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15164.1.1prot_P-wetherbeei_contig15164.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15164 977..1633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15164.1.1

>prot_P-wetherbeei_contig15164.1.1 ID=prot_P-wetherbeei_contig15164.1.1|Name=mRNA_P-wetherbeei_contig15164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp
LESALYRLNPDAPCLSPEVQGRWVDTLGDLLDVFEAGLARGNFEPDAHIV
AFLGARGGITAADLGALKTFDGKDPRRAAAILKLGVRIYVEAKGKPLPNL
TKVCHSAAQALIDRLRNPNVRTDQTAKAEAAAAISDIQTLADLATDPDIF
GADNAEFMRAKQEFDANQRILNMRDSIVETTARMGSEKGQEISLMILSGL
AIVTVLFQLFTQIGKAGL*
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mRNA from alignment at P-wetherbeei_contig15164:977..1633-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15164.1.1 ID=mRNA_P-wetherbeei_contig15164.1.1|Name=mRNA_P-wetherbeei_contig15164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig15164:977..1633- (Phaeothamnion wetherbeei SAG_119_79)
CTCGAAAGCGCGCTCTACCGGCTGAACCCTGACGCGCCGTGCCTGTCGCC
CGAGGTGCAAGGGCGCTGGGTCGACACGCTTGGCGACCTGCTCGACGTGT
TCGAGGCGGGTCTGGCGCGCGGCAATTTCGAGCCCGACGCGCACATCGTC
GCGTTCCTGGGTGCGCGCGGCGGCATCACGGCCGCCGATCTCGGCGCGCT
CAAGACGTTCGACGGCAAGGATCCGCGGCGGGCCGCGGCGATCCTGAAGC
TCGGCGTGCGCATCTATGTCGAGGCGAAAGGCAAGCCGCTGCCGAACCTG
ACCAAGGTCTGCCATTCGGCAGCACAGGCACTGATCGACCGGCTGCGCAA
TCCCAACGTGCGCACCGACCAGACCGCCAAGGCCGAGGCCGCGGCCGCCA
TCTCCGACATCCAGACGCTGGCCGACCTCGCGACCGATCCCGATATCTTC
GGGGCCGACAACGCCGAGTTCATGCGCGCCAAGCAGGAATTCGACGCCAA
CCAGCGCATCCTCAACATGCGCGATTCGATCGTCGAGACGACCGCGCGCA
TGGGCAGCGAAAAAGGCCAGGAGATCTCGCTGATGATCCTGTCCGGCCTC
GCCATCGTCACCGTCCTGTTCCAGCTCTTCACGCAGATCGGCAAGGCCGG
CTTATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15164:977..1633-

>mRNA_P-wetherbeei_contig15164.1.1 ID=mRNA_P-wetherbeei_contig15164.1.1|Name=mRNA_P-wetherbeei_contig15164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig15164:977..1633- (Phaeothamnion wetherbeei SAG_119_79)
CTCGAAAGCGCGCTCTACCGGCTGAACCCTGACGCGCCGTGCCTGTCGCC
CGAGGTGCAAGGGCGCTGGGTCGACACGCTTGGCGACCTGCTCGACGTGT
TCGAGGCGGGTCTGGCGCGCGGCAATTTCGAGCCCGACGCGCACATCGTC
GCGTTCCTGGGTGCGCGCGGCGGCATCACGGCCGCCGATCTCGGCGCGCT
CAAGACGTTCGACGGCAAGGATCCGCGGCGGGCCGCGGCGATCCTGAAGC
TCGGCGTGCGCATCTATGTCGAGGCGAAAGGCAAGCCGCTGCCGAACCTG
ACCAAGGTCTGCCATTCGGCAGCACAGGCACTGATCGACCGGCTGCGCAA
TCCCAACGTGCGCACCGACCAGACCGCCAAGGCCGAGGCCGCGGCCGCCA
TCTCCGACATCCAGACGCTGGCCGACCTCGCGACCGATCCCGATATCTTC
GGGGCCGACAACGCCGAGTTCATGCGCGCCAAGCAGGAATTCGACGCCAA
CCAGCGCATCCTCAACATGCGCGATTCGATCGTCGAGACGACCGCGCGCA
TGGGCAGCGAAAAAGGCCAGGAGATCTCGCTGATGATCCTGTCCGGCCTC
GCCATCGTCACCGTCCTGTTCCAGCTCTTCACGCAGATCGGCAAGGCCGG
CTTATGA
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