mRNA_P-wetherbeei_contig15116.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: D7G3N4_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3N4_ECTSI) HSP 1 Score: 319 bits (817), Expect = 3.170e-100 Identity = 173/341 (50.73%), Postives = 221/341 (64.81%), Query Frame = 1
Query: 16 GEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVAACAVSVVWHGGFWPWRMPDYTLLLQVWQNGDDARVAAARAARRVLLAQAALLVPLLWLFTWHAAVAEALAAVLGWAAGQALRCCCCPDSVQAEHRCCVGLVKAWAAAAAVLLLGDMVS 1038
G G +E++S P T LL+ NL AY LWAN +P+AVAISYA FWE EYWR TASFSHFE +HL FN M WN LE +G+ YLY SL+LVV TI+VV++I+H LV+ G E+ R KAVG+SCVLFA MT AV +FCP+ T CF T+ +P + L N GPFA + Q +MPRA FLGHLSGI +GY +AWG L G + P++ + ++ H W RMPD++LLLQ W GD RVA AR A L V L +F+W + V E +A V+G+ A QAL+CCCCPDSV AEHR CV L+KA+ A +A+LL+ D++S
Sbjct: 187 GRGPAEIVSYPGTVLLLVINLAFAYHLWANRVSPDAVAISYARFWEEREYWRLFTASFSHFEPLHLVFNAMGTWNTRELERLLGTFRYLYLSLDLVVTTIMVVMVIKHALVKWRG--VESQREGKAVGFSCVLFAYMTYLAVAMREFCPIG---TLCFSTYSIPMFWGM-PSLPVNLGPFASQAIAQVVMPRAAFLGHLSGIFMGYLMAWGFLGGLSIPILAGISVIFMLQHSKAWARRMPDFSLLLQSWAGGDAGRVARARRMGYAFAAHVCLTVALSMVFSWGSTVGEVMALVVGFNALQALKCCCCPDSVPAEHRFCVNLLKAYGALSAILLVSDLLS 521
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S3XIE2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XIE2_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.820e-52 Identity = 116/281 (41.28%), Postives = 155/281 (55.16%), Query Frame = 1
Query: 19 EGISEVLSKPATALLMAANLFVAYRLWANHTTP-EAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVAACAVSVVWH--------GGFWPWRMPDYTLLLQVWQNGDDARVAAARAARRVLLAQAA 834
+ I E+L+ P T L+ N Y+LWA+ P + V+ S AF E EYWRA+TASFSHF+ MH+GFN++SL+NL ++E G +L + LVVGT++ + + G EA R ++AVG+SCVLF+ M AAVR +FCP+ CF T+ L + FN GPF LL L FIMPRA F+GHLSGI+ GY AWGLL TPP++ A C + + H G +P + W + DAR AR L A AA
Sbjct: 187 KNIRELLATPVTLFLLIVNAAAGYKLWADRVLPVDRVSFSVRAFVEEQEYWRAITASFSHFDLMHIGFNLLSLYNLKAVETVYGPWHHLCLTAVLVVGTMLTNAAAGVYIWKARGQ--EAQRNKQAVGFSCVLFSYMVIAAVRMKEFCPIPGFSGLCFKTYML-------GQFSFNAGPFVLLVLTHFIMPRASFIGHLSGIIWGYLAAWGLLSAVTPPMLCALCGLLALAHHGPALGEEGATTAGGVPCRADAFRPWSSLPDARYYGGAEARAALPADAA 458
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S1XQ68_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQ68_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.940e-47 Identity = 105/239 (43.93%), Postives = 144/239 (60.25%), Query Frame = 1
Query: 10 RSGEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAH---RAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLP-----FKGALHRRLGF------NFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVA 684
R+GEG+S+ ++ P T + N VA+ L+ E VA +Y A EYWRA TA+FSH+E MH FNM SL+ + LEA +GS+ Y +++LVV T+ V + L+R G AEA R + ++G+S VLFA MT A++ +FCP+ F+P CF T+ L F GAL +R N GP ALLF+ Q IMPRA FLGHL+GI+VGYP AWG TPP++++
Sbjct: 152 RTGEGVSQAMAAPVTCAFLLLNAVVAFLLYRWRVPWEDVAFNYEAVVGGGEYWRAATAAFSHYEPMHFLFNMSSLYAMQGLEALLGSVSLFYLTVDLVVLTVAVEAAMLWALMRCAGADAEARSRWRNRSSLGFSAVLFAWMTVEALKMDEFCPIFFLPELCFKTYHLTLSPHGFLGALLKRAKLPYSIPGNGGPLALLFVTQLIMPRASFLGHLAGIIVGYPFAWGWFYWLTPPMLLS 390
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A482SCU2_9ARCH (Rhomboid family intramembrane serine protease n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCU2_9ARCH) HSP 1 Score: 176 bits (446), Expect = 2.590e-46 Identity = 103/270 (38.15%), Postives = 152/270 (56.30%), Query Frame = 1
Query: 10 RSGEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVA-ACAVSVVWHGGFW-PWRMPDYTLLLQVWQNGDDARVAAARAARR 813
+S + ++L P ++A+ +++AY LW T AV+ SY + + EYWRA+TAS +HF+ +HLGFN M+L+ LE+ GSL Y Y S+ L+V T+ + + + H+L+ + + Q+AVGYSCVLFA M +VR FCP+ P+FC L N GPF LL IMPRA F+GHLSGI++GYPLAWG+L+ TPP +++ C V + H ++ P TL + Q V+ +R A +
Sbjct: 153 QSPSNLQQLLDSPMNTFILASLIYIAYLLWEYRTEVSAVSFSYESLVQRGEYWRAITASVAHFDLLHLGFNTMALYQFRMLESVYGSLVYGYLSMALLVITMCICVGLYHILIYKYNLTNYIN--QQAVGYSCVLFAWMVALSVRLETFCPIFLFPSFC-----LXXXXXXXXXXPVNLGPFVLLVFTSLIMPRASFIGHLSGIIIGYPLAWGMLNFLTPPFLMSFLCLVYMHIHTLYYCKLASPANTLFSESEQLPTVVEVSTSRLAEK 415
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A835YKD5_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD5_9STRA) HSP 1 Score: 166 bits (420), Expect = 5.570e-44 Identity = 108/269 (40.15%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 16 GEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAE-------------------------------------------------------------------MGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGP-AAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSG 618
G G++ + + P TA+L+A N+ A LW PEAVA+SYAA + +YWR VTASFSHFE +HLGFNMMSL+N LE + MG++ YLY S LV T+ V+L+Q + R P AAEA R+ +AVGYSCVLFA MT AV + +FCP+ F CF T LP L L N GPFALL +VQ +MPRAGFLGHL+G
Sbjct: 173 GGGLAALAAMPGTAVLLAVNVAAALWLWVRRVPPEAVAVSYAAVVQDKQYWRCVTASFSHFEPLHLGFNMMSLYNSGPLEQDTGNFKSDXXXXXXXXXXXXXXXXXXXXSAVQPQAAVFKHPVADHGAVKIRHRALDCVRTRNNVPSKYMGTVRYLYLSAALVAATMATVLLLQRAAIARSAPDAAEALRSSRAVGYSCVLFAFMTAEAVLQPEFCPLPFAEGLCFATHALP--PPLPAALRVNAGPFALLLVVQAVMPRAGFLGHLAG 439
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S4MA91_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MA91_9STRA) HSP 1 Score: 150 bits (378), Expect = 4.200e-37 Identity = 95/260 (36.54%), Postives = 146/260 (56.15%), Query Frame = 1
Query: 10 RSGEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLA-SLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGL--LDGATPPLVVAACAVSVVWHGGFWPWRMPDYTLLLQVWQNGDD 780
R+ + + +++S+P T LL+ N+ +A+ W H P +VA Y+ E WR+ T + +HFE MH+GFNMMSL+ L LE GS+ +L+ ++ LVV T V++ + + ++ G A A VGYS VLFA M ++ + CPV F+P CFDT+ + F GA+ FN P LF+ QFIMPR F+GHL+GI+ G+ L W L L+ A P +++ A ++ H F + + + W G+D
Sbjct: 67 RANQHVEQIVSRPTTTLLLLLNVCLAFCYWNRHVCPSSVAKIYSKIVVEGEIWRSFTGATAHFEPMHIGFNMMSLYGLGMELEEGYGSIPFLFYNVALVVLTTAVMMGMTYARMKHTGNARLAE--VSTVGYSGVLFAWMVVTSLERPRTCPVPFLPDMCFDTYSV-FGGAIK----FNASPIVQLFVAQFIMPRVSFMGHLAGIVCGFALHWSLVPLELACPHVLIPAALLA---HMHFVRGMVLEPASGVVAWTGGND 316
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S2CBL6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CBL6_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.110e-32 Identity = 89/249 (35.74%), Postives = 130/249 (52.21%), Query Frame = 1
Query: 205 MHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVAACAVSVVWHGGFWP--------------WRMPDYTLLLQVWQN-GDDARVAAARAARRVLLAQAALLVPLLWLFTWHAAVAEALAAVLG 906
MHL FNM+SL+NL SLEA G+L YL SL LVV TI+ V+ I HVL+ R E + Q+A+GYSCV+FA + A+R ++CPV + CF T+ +P NF P LLF IMP A +GH +G+L+GYPLAW L TPP + A ++++ H P W D + ++ + + ++++ + VL+ Q + F W A + A+ AV+G
Sbjct: 1 MHLLFNMVSLYNLGSLEAVYGTLDYLCYSLALVVLTIVAVMAIHHVLITRF--RLEGYVTQQAIGYSCVIFAWIVVMALRMDRYCPVPGFDSLCFTTYRIPLGS--FGVFPLNFAPIFLLFATSAIMPNASLVGHGAGVLLGYPLAWDFLSWITPPTLAGAVMLAILAHMRLDPDSSLQENEQPARVTWAGRDVDVRGRIREGISPSSSSSSSQVGQCVLVLQFTAAAAVGRYFVWEAVIPHAICAVVG 245
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S2RP20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP20_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.030e-28 Identity = 68/149 (45.64%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 265 GSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATPPLVVAACAVSVVWH 711
G+ YL S+ LVV T+I ++I H L+ R G ++ +Q AVGYSCVLFALMT A +R Q+CP+ + CF T+ +P RL N P L+FL FIMPRA +GHL+G+ +GYP+AW LLD TPP ++A +++V H
Sbjct: 5 GTAQYLSYSIALVVLTMIAAMVIYHCLIHRAG--RRSYYSQFAVGYSCVLFALMTVATLRTEQYCPIPGMQQLCFRTYSIPLPSGGQLRL--NAAPVFLVFLTSFIMPRASLVGHLAGVAMGYPVAWRLLDWLTPPALLAYSLLAIVMH 149
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: A0A7S1CN55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN55_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.870e-28 Identity = 81/215 (37.67%), Postives = 115/215 (53.49%), Query Frame = 1
Query: 25 ISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLEAEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDGATP 669
+S+ L P T+LL+ V + W E VA+SY +YWRAV+A+FSH A+HL FNM SLW ++E +GS YL+ +L L++ + + + +L +R G + Q AVGYSCV+F MT A Q P S +P LP G ++ L N PF L + Q I+ RA +GHL+GI G+ +AWG+L TP
Sbjct: 6 VSQALDMPVTSLLVVVCSAVWFHCWNRRIGAENVAVSYDLLVRRRQYWRAVSAAFSHLNALHLLFNMASLWACGAMEVALGSAVYLHVTLLLLLLSTSMAMGGYWLLSKRFG--LRRYETQTAVGYSCVVFGWMTIMA----QLRPTSSIP--------LP--GGINLPL--NLAPFTSLLITQLIVRRASLIGHLAGIFAGFFIAWGMLGWLTP 202
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Match: UPI001F5E1CFD (RHOMBOID-like protein 13 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5E1CFD) HSP 1 Score: 120 bits (300), Expect = 3.860e-28 Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 1
Query: 25 ISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWEACEYWRAVTASFSHFEAMHLGFNMMSLWNLASLE----AEMGSLGYLYTSLNLVVGTIIVVILIQHVLVRRGGPAAEAHRAQKAVGYSCVLFALMTCAAVREGQFCPVSFVPTFCFDTWFLPFKGALHRRLGFNFGPFALLFLVQFIMPRAGFLGHLSGILVGYPLAWGLLDG 660
I EVL KPA++ ++A + Y + V +SY A E +YWR +T++FSH +HL FNM +LW+L ++E A +G YL+ ++ LVV + ++V+ I HV+++R E R AVGYSCV+F MT A ++ P S + F G L L +F PF L ++P+A F+GHLSGI+VGY +AWGL+ G
Sbjct: 6 IYEVLEKPASSSVIAICSLIWYLIQKRGIGYSDVGLSYEAVMEGGQYWRIITSAFSHVSVIHLVFNMSALWSLGAVEQLGHAGLGVQYYLHYTVVLVVLSGLLVLGIYHVMIQRF--KVEYFRRVTAVGYSCVVFGWMTILAAKQ----PSSKLNLF----------GVL--SLPISFAPFESLIFTSIMVPQASFIGHLSGIIVGYSIAWGLIHG 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15116.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15116.1.1 >prot_P-wetherbeei_contig15116.1.1 ID=prot_P-wetherbeei_contig15116.1.1|Name=mRNA_P-wetherbeei_contig15116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=347bp MRRRSGEGISEVLSKPATALLMAANLFVAYRLWANHTTPEAVAISYAAFWback to top mRNA from alignment at P-wetherbeei_contig15116:379..1419- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15116.1.1 ID=mRNA_P-wetherbeei_contig15116.1.1|Name=mRNA_P-wetherbeei_contig15116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig15116:379..1419- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15116:379..1419- >mRNA_P-wetherbeei_contig15116.1.1 ID=mRNA_P-wetherbeei_contig15116.1.1|Name=mRNA_P-wetherbeei_contig15116.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig15116:379..1419- (Phaeothamnion wetherbeei SAG_119_79)back to top |