mRNA_P-wetherbeei_contig151.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: D7FXL2_ECTSI (Sexually induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 337 bits (863), Expect = 7.060e-111 Identity = 154/204 (75.49%), Postives = 170/204 (83.33%), Query Frame = 1
Query: 166 VLCVLALVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
+L ALVG + AYCPNSCSGHGSCG ND+CTCY R NG+VAW GADCS RTCPKGAAWA VA ND HP+VECSA G CDR++G C CF+ YEGVACER+ICPNDCSG GFC+TEKQ+AADA TY+T WDAEK VGC CDAG+RG DCSLQECPSG DVM GDGS EGRDCSGRG+CDY+ GLC CF GFYG+ CEYQTIL
Sbjct: 8 LLFFAALVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWIGADCSLRTCPKGAAWAKEAVAANDAHPEVECSAKGTCDRATGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRGICDYTTGLCGCFLGFYGTMCEYQTIL 211
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: A0A7S2BSV2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 308 bits (788), Expect = 1.440e-99 Identity = 134/193 (69.43%), Postives = 156/193 (80.83%), Query Frame = 1
Query: 199 AAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
AAYCPN CSGHGSCG NDKCTCY R NG+ AWT DCS RTCPK AAW A N+ HP VECS G C+R +GEC CFD Y+G+ACER++CP DCS GFCYTEKQ+AADA+ TY WDA K VGCVCD GYRG DCSLQECPSG DV+KGDG+++GRDCSGRG+C+Y AGLCKCF G++G++C++QTIL
Sbjct: 19 AAYCPNGCSGHGSCGSNDKCTCYLRPNGDAAWTSHDCSLRTCPKSAAWVAVATAANEAHPSVECSNKGSCNRKTGECDCFDNYDGIACERTVCPGDCSNHGFCYTEKQLAADASKTYTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRGICNYGAGLCKCFTGYFGTKCQHQTIL 211
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: A0A7S2WLA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLA1_9STRA) HSP 1 Score: 305 bits (782), Expect = 2.460e-98 Identity = 131/194 (67.53%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 196 AAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
AAAYCPN CSGHGSC NDKC CYTR NG+ AWT DCS RTCPK AAW A N+ HP+VECS G+C+R +GEC CF+ Y+G+ACER++CPNDCSG+G CYT+KQ+AA+A++TY WDA K VGCVCD GYRG DCSL+ECPSG DV+ GDG+ +GRDCSGRG+CDYS GLCKCF G++G++C++QTIL
Sbjct: 40 AAAYCPNGCSGHGSCSGNDKCVCYTRPNGDPAWTEHDCSLRTCPKAAAWVAVATAANEAHPEVECSNKGLCNRKTGECECFENYDGIACERTVCPNDCSGRGICYTQKQLAAEASMTYTEPWDAMKHVGCVCDLGYRGPDCSLEECPSGPDVLLGDGNEKGRDCSGRGICDYSTGLCKCFTGYFGTKCQHQTIL 233
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: F0Y4Z3_AURAN (EGF-like domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 301 bits (770), Expect = 1.370e-96 Identity = 131/194 (67.53%), Postives = 153/194 (78.87%), Query Frame = 1
Query: 199 AAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDN-HPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
AAYCPN CSGHGSCG +D+CTCY R N + AW ADCSERTCP AW PVA +N H ECS G+CDR SGEC CFD YEG+ACER+ CPNDCS +G CYT+KQ+A +AA TYDT WDA K VGCVCD G+RG DCSLQECPSG DV+ GDG+ +GRDCSGRG+CDY +GLCKCF G+YG++C+ QT+L
Sbjct: 36 AAYCPNGCSGHGSCGSDDRCTCYLRPNNDSAWQAADCSERTCPMDLAWVKYPVAGENNVHESTECSNMGICDRKSGECECFDGYEGIACERTSCPNDCSARGICYTQKQLATEAATTYDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRGLCDYDSGLCKCFSGYYGTKCQQQTVL 229
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: A0A812W0K4_SYMMI (Tnc protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W0K4_SYMMI) HSP 1 Score: 299 bits (765), Expect = 3.760e-96 Identity = 132/204 (64.71%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 166 VLCVLALVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
V+ L++ A AYCPN CSGHGSCG NDKCTCY R +GE AWT DCS RTCPK AAW N+ HP VECS G+CDR +GEC CF+ YEG+ACER++CPN CS G C+TEKQ+AA+A+ YD+ WDAEK VGC+CD G RG DCSL ECPSG DV+KG G+ GRDCSGRG+CDY+ G C CFHG+YG++CEYQTIL
Sbjct: 5 VVTFLSIATAAVAYCPNGCSGHGSCGTNDKCTCYARIDGEAAWTFPDCSGRTCPKSAAWIGDVAGANNAHPVVECSNKGICDRETGECQCFENYEGIACERTVCPNSCSDAGVCFTEKQLAAEASRDYDSPWDAEKHVGCICDLGRRGPDCSLVECPSGADVLKGYGNEAGRDCSGRGLCDYTDGTCSCFHGYYGTKCEYQTIL 208
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: C4B7Q8_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q8_OCHDN) HSP 1 Score: 298 bits (764), Expect = 5.320e-96 Identity = 136/204 (66.67%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 166 VLCVLALVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
+L + L+ A A CPN C+GHGSCG NDKCTCYTR +GE AWT ADCS RTCPK +AW ND HP VECS GVCDR +GEC CF Y+G+ACER ICPN CS G C+T+KQ+A DAA TY T WDAEK VGCVCD G RG DCSL ECPSG DV+KG GS GRDCSGRG+CDYS+G+C CFHG+YG++CEYQT+L
Sbjct: 5 ILLLAFLLAVAQAACPNGCNGHGSCGANDKCTCYTRIDGEPAWTYADCSGRTCPKSSAWVGDVQNANDAHPVVECSNKGVCDRKTGECKCFANYDGIACERPICPNKCSDAGVCFTQKQLAVDAARTYATPWDAEKEVGCVCDLGRRGPDCSLFECPSGPDVLKGFGSEAGRDCSGRGLCDYSSGICNCFHGYYGTKCEYQTVL 208
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: Q9Y0F6_THAWE (Sexually induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 284 bits (726), Expect = 3.870e-90 Identity = 126/203 (62.07%), Postives = 156/203 (76.85%), Query Frame = 1
Query: 154 IGKTVLCVLALVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAW-ATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRC 759
+ K +L + L+ AYCPN+CSGHGSCG+NDKCTCY R NG+ AWTG DCS RTCPKG AW A V+++D HP +ECS G+CDR +GEC CF+ Y+G ACER+ICPNDCSG+G C +K +AA TYDT WDAEK +GC CDAGYRG DCS +ECPSGDD++ +G +EGRDCSGRG C+Y GLC+CF G++G+RC
Sbjct: 1 MAKYLLVLATLLATVRAYCPNACSGHGSCGINDKCTCYLRPNGDPAWTGHDCSMRTCPKGNAWVAEEAVSLDDVHPRMECSNKGMCDRETGECVCFENYDGKACERTICPNDCSGRGICLPQKSLAALEGATYDTPWDAEKHLGCKCDAGYRGPDCSQKECPSGDDILGREGGSEGRDCSGRGKCNYVTGLCQCFTGYFGNRC 203
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: B8CC41_THAPS (Sig3-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 282 bits (722), Expect = 1.170e-89 Identity = 124/208 (59.62%), Postives = 159/208 (76.44%), Query Frame = 1
Query: 160 KTVLCVLA-LVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPV-AINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
K +L VLA LV A A+CPN C G+GSCG+NDKCTCY R NG+ AWT DCSERTCP G+AW++ ND HP ECS G CDR+SGEC CF+ Y+G ACER++CPNDCSG+G C T+K +A TY+T WDAEK +GC CD GYRG DCS +ECPSG+D++ GDG+ +GR+CSGRG C++ GLC+CF G++G++C++QT+L
Sbjct: 3 KALLVVLATLVATAGAHCPNGCKGNGSCGINDKCTCYLRPNGDPAWTAHDCSERTCPYGSAWSSETTNGANDAHPHAECSNKGTCDRNSGECVCFENYDGKACERTLCPNDCSGRGICLTQKALAIFQGATYETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNCNFITGLCQCFDGYFGNKCQHQTVL 210
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: A0A7S0SS37_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 280 bits (715), Expect = 1.370e-88 Identity = 123/190 (64.74%), Postives = 143/190 (75.26%), Query Frame = 1
Query: 208 CPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAAVTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTIL 777
CPN CSGHGSCG NDKCTCYTR +G+ AWT ADCS RTCPK AW ND HP ECS G CDR +G+C C+ Y+G+AC+R+ICPN CS G C+TE Q+A++A TY T WDA K VGCVCD G RG DCSL ECPSG DV+ G G+ GRDCSGRG+CDYS+G+C CFHG+YG RCEYQT+L
Sbjct: 22 CPNGCSGHGSCGSNDKCTCYTRIDGDPAWTYADCSGRTCPKAIAWVGEVSNTNDAHPLTECSNKGTCDRKTGQCICYPNYDGIACDRTICPNRCSESGVCFTEYQLASEAGRTYSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRGICDYSSGICGCFHGYYGHRCEYQTVL 211
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Match: A0A835ZIV1_9STRA (Sexually induced protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIV1_9STRA) HSP 1 Score: 268 bits (685), Expect = 4.330e-84 Identity = 121/208 (58.17%), Postives = 152/208 (73.08%), Query Frame = 1
Query: 178 LALVGGA----AAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGADCSERTCPKGAAWATGPVAINDNHPDVECSAAGVCDRSSGECACFDAYEGVACERSICPNDCSGKGFCYTEKQMAADAA---VTYDTVWDAEKAVGCVCDAGYRGADCSLQECPSGDDVMKGDGSAEGRDCSGRGVCDYSAGLCKCFHGFYGSRCEYQTILY 780
LAL GA AA+CPN C+ HG C ND C C+ + + AWTG DCSERTCP G AW + V + HP + CSA G C+R +G C C++ YEG+ACER++CPN+CSG GFCYT++Q+ D A + Y WDA+K VGC CD GYRG DCSL+ECP+G D M G G+A+GRDCSGRG+CDY++GLCKCFHGF+G++CE QTILY
Sbjct: 5 LALAAGALAQVAAHCPNFCNLHGICTANDICVCHLKNDDTPAWTGPDCSERTCPTGIAWVSEMVEASGEHPVLTCSAKGNCNRETGVCDCYEGYEGIACERTVCPNNCSGNGFCYTQQQLVDDLAGSNIEYTQPWDAQKHVGCKCDPGYRGPDCSLRECPTGPDQMGGSGAAQGRDCSGRGICDYTSGLCKCFHGFFGTKCEQQTILY 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig151.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig151.4.1 >prot_P-wetherbeei_contig151.4.1 ID=prot_P-wetherbeei_contig151.4.1|Name=mRNA_P-wetherbeei_contig151.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp MIGKTVLCVLALVGGAAAYCPNSCSGHGSCGLNDKCTCYTRANGEVAWTGback to top mRNA from alignment at P-wetherbeei_contig151:4235..6130+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig151.4.1 ID=mRNA_P-wetherbeei_contig151.4.1|Name=mRNA_P-wetherbeei_contig151.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1896bp|location=Sequence derived from alignment at P-wetherbeei_contig151:4235..6130+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig151:4235..6130+ >mRNA_P-wetherbeei_contig151.4.1 ID=mRNA_P-wetherbeei_contig151.4.1|Name=mRNA_P-wetherbeei_contig151.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig151:4235..6130+ (Phaeothamnion wetherbeei SAG_119_79)back to top |