mRNA_P-wetherbeei_contig15096.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15096.1.1
Unique NamemRNA_P-wetherbeei_contig15096.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Match: A0A7Z9UDE0_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UDE0_9BACT)

HSP 1 Score: 184 bits (468), Expect = 3.350e-57
Identity = 89/133 (66.92%), Postives = 110/133 (82.71%), Query Frame = 1 
Query:   13 MAASIENQLQGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKLGVGVDKHMGVGAWDNNPNAKTPYNGAIQQIYSGAKTFDHLRTKGGADANSPMDKQLAAVNKAGWATDKNWHNGVNKNYNNIVS 411
            MA  IE++L GTPL  KGLGAHFVAAGK+NNVDP+AL AISK ET  GKLGVGV KHMGVGA+D++PN    ++GA+ QIYSGAKTF +LR KGG++A++P+ +QLAAVN+AGWATDK+WH+ V K YN+  S
Sbjct:    1 MAEFIESKLAGTPLEGKGLGAHFVAAGKKNNVDPLALAAISKHETGHGKLGVGVAKHMGVGAFDSSPNTPRKWDGAVNQIYSGAKTFANLRRKGGSNADAPLGQQLAAVNRAGWATDKSWHSKVGKAYNSYAS 133
[Close]
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Match: UPI001432CA16 (hypothetical protein n=1 Tax=Methanocorpusculum sp. GPch4 TaxID=2527877 RepID=UPI001432CA16)

HSP 1 Score: 179 bits (454), Expect = 1.480e-52
Identity = 83/135 (61.48%), Postives = 109/135 (80.74%), Query Frame = 1 
Query:    4 DKDMAASIENQLQGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKLGVGVDKHMGVGAWDNNPNAKTPYNGAIQQIYSGAKTFDHLRTKGGADANSPMDKQLAAVNKAGWATDKNWHNGVNKNYNNIV 408
            D+ +A  IE QL+G+P A +GLG+HFVAAG+QN VDP+AL+AI+K ET +GKLGVG+ K +GVGA+D+NPN KTP++GA+ QIYSGAKTF +LR+KGG+ A   +  QL+AVNKAGWATD++WH  V  +YN I 
Sbjct:  244 DQKLAQFIETQLEGSPAAGQGLGSHFVAAGRQNEVDPLALLAIAKHETGYGKLGVGLTKMLGVGAYDSNPNGKTPFDGAVNQIYSGAKTFANLRSKGGSTAQDSLGNQLSAVNKAGWATDQSWHTKVASHYNTIA 378
[Close]
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Match: A0A7X8XMA2_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XMA2_9BURK)

HSP 1 Score: 178 bits (451), Expect = 4.360e-52
Identity = 83/135 (61.48%), Postives = 107/135 (79.26%), Query Frame = 1 
Query:    4 DKDMAASIENQLQGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKLGVGVDKHMGVGAWDNNPNAKTPYNGAIQQIYSGAKTFDHLRTKGGADANSPMDKQLAAVNKAGWATDKNWHNGVNKNYNNIV 408
            D+ +A  IE QL G+P A +GLGAHFVAAG+QN VDP+ L+AI+K ET +GKLGVG+ K +GVGA+D+NPN KTP++GA+ QIYSGAKTF +LR KGG++A   +  QL+AVNKAGWATD++WH  V  +YN I 
Sbjct:  246 DQKLAEFIETQLAGSPAAGQGLGAHFVAAGRQNEVDPLVLLAIAKHETGYGKLGVGLTKMLGVGAYDSNPNGKTPFDGAVNQIYSGAKTFANLRAKGGSNAQDSLGNQLSAVNKAGWATDQSWHTKVASHYNTIA 380
[Close]
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Match: A0A355TSF9_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TSF9_9BACT)

HSP 1 Score: 131 bits (329), Expect = 9.820e-33
Identity = 75/142 (52.82%), Postives = 101/142 (71.13%), Query Frame = 1 
Query:    1 SDKDMAASIENQL--QGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKLGVGVDKHMGVGAWDNNP-NAKT--PYNGAIQQIYSGAKTFDHLRTKGGADANSPMDKQLAAVNKAGWATDKNWHNGVNKNYNNIVS 411
            SD+D+A +I+  L  QG+  A +G G  FV AGK+ NVDP+ L++I+ QET +GK G+G++  MGVGA+D+NP NA T   ++G   QI  GAKTF +LR KGG+ A++ +  Q AAVN+AGWATD+NWHNGV   Y N VS
Sbjct:  645 SDEDIANAIDGFLSEQGSE-APEGTGKLFVEAGKEYNVDPLILLSIAGQETQWGKTGIGINGWMGVGAYDSNPTNATTNSTFSGVQNQINVGAKTFANLREKGGSSADASVADQTAAVNEAGWATDQNWHNGVTSIYQNQVS 785
[Close]
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Match: A0A1E4EMJ5_9BACT (Uncharacterized protein n=1 Tax=bacterium SCN 62-11 TaxID=1660156 RepID=A0A1E4EMJ5_9BACT)

HSP 1 Score: 120 bits (301), Expect = 1.040e-30
Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 1 
Query:   40 QGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKLGVGVDKHMGVGAWDNNPNAKT---PYNGAIQQIYSGAKTFDHLRTKGGADANSPMDKQLAAVNKAGWATDKNWHNGVNKNYNNIV 408
            QG+   +   G      GKQ +VDPM L+AI+  ET FG  GVG++  +GVGA+D++PN  T    ++G  QQ+  GA+TF +LR KGGA A+ P++ Q AAVNKAGWATD+NWHNGV++ Y  + 
Sbjct:  160 QGSKAGDAQFGELAEKYGKQYDVDPMILLAIAGHETRFGTTGVGLNGLLGVGAYDSDPNNSTRNSKFSGVEQQLKVGAETFANLRKKGGASASDPVEVQTAAVNKAGWATDQNWHNGVDQMYKQVT 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15096.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7Z9UDE0_9BACT3.350e-5766.92Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
UPI001432CA161.480e-5261.48hypothetical protein n=1 Tax=Methanocorpusculum sp... [more]
A0A7X8XMA2_9BURK4.360e-5261.48Uncharacterized protein n=1 Tax=Burkholderiales ba... [more]
A0A355TSF9_9BACT9.820e-3352.82Uncharacterized protein n=1 Tax=bacterium UBP9_UBA... [more]
A0A1E4EMJ5_9BACT1.040e-3049.21Uncharacterized protein n=1 Tax=bacterium SCN 62-1... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15096contigP-wetherbeei_contig15096:933..1343 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1406785.U5PXM7_9CAUD
Model size411
Max annot lvl10662|Myoviridae
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.82e-10
EggNOG OGs4QAK6@10239|Viruses,4QUP9@35237|dsDNA viruses no RNA stage,4QPBY@28883|Caudovirales,4QHYN@10662|Myoviridae
Descriptionamidase activity
Cds size399
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186044.3107014-UTR-P-wetherbeei_contig15096:932..9441683186044.3107014-UTR-P-wetherbeei_contig15096:932..944Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15096 933..944 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186044.3225799-CDS-P-wetherbeei_contig15096:944..13431683186044.3225799-CDS-P-wetherbeei_contig15096:944..1343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15096 945..1343 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15096.1.1prot_P-wetherbeei_contig15096.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15096 945..1343 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15096.1.1

>prot_P-wetherbeei_contig15096.1.1 ID=prot_P-wetherbeei_contig15096.1.1|Name=mRNA_P-wetherbeei_contig15096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MAASIENQLQGTPLANKGLGAHFVAAGKQNNVDPMALVAISKQETNFGKL
GVGVDKHMGVGAWDNNPNAKTPYNGAIQQIYSGAKTFDHLRTKGGADANS
PMDKQLAAVNKAGWATDKNWHNGVNKNYNNIVS
back to top

mRNA from alignment at P-wetherbeei_contig15096:933..1343+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15096.1.1 ID=mRNA_P-wetherbeei_contig15096.1.1|Name=mRNA_P-wetherbeei_contig15096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig15096:933..1343+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGACAAAGATATGGCCGCCAGCATCGAAAACCAGCTGCAAGGCACGCC
GCTCGCGAACAAGGGCCTGGGGGCTCACTTTGTGGCGGCCGGAAAGCAAA
ACAATGTGGATCCGATGGCCCTGGTCGCCATCAGCAAGCAAGAGACCAAC
TTCGGGAAGCTCGGGGTTGGCGTCGACAAGCACATGGGTGTGGGAGCTTG
GGACAACAATCCCAACGCCAAAACGCCCTATAATGGAGCTATTCAACAAA
TTTACTCAGGCGCCAAGACCTTCGATCACCTGCGCACCAAAGGCGGAGCC
GACGCGAACTCCCCCATGGACAAGCAACTCGCGGCCGTCAACAAGGCGGG
GTGGGCGACGGACAAAAATTGGCACAACGGTGTCAACAAGAACTACAACA
ACATTGTATCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15096:933..1343+

>mRNA_P-wetherbeei_contig15096.1.1 ID=mRNA_P-wetherbeei_contig15096.1.1|Name=mRNA_P-wetherbeei_contig15096.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig15096:933..1343+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGCCAGCATCGAAAACCAGCTGCAAGGCACGCCGCTCGCGAACAA
GGGCCTGGGGGCTCACTTTGTGGCGGCCGGAAAGCAAAACAATGTGGATC
CGATGGCCCTGGTCGCCATCAGCAAGCAAGAGACCAACTTCGGGAAGCTC
GGGGTTGGCGTCGACAAGCACATGGGTGTGGGAGCTTGGGACAACAATCC
CAACGCCAAAACGCCCTATAATGGAGCTATTCAACAAATTTACTCAGGCG
CCAAGACCTTCGATCACCTGCGCACCAAAGGCGGAGCCGACGCGAACTCC
CCCATGGACAAGCAACTCGCGGCCGTCAACAAGGCGGGGTGGGCGACGGA
CAAAAATTGGCACAACGGTGTCAACAAGAACTACAACAACATTGTATCC
back to top