mRNA_P-wetherbeei_contig10400.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A431M6L4_9BRAD (TolC family protein n=10 Tax=Proteobacteria TaxID=1224 RepID=A0A431M6L4_9BRAD) HSP 1 Score: 717 bits (1850), Expect = 3.390e-253 Identity = 385/392 (98.21%), Postives = 388/392 (98.98%), Query Frame = 1 Query: 1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176 SPA+AA+Q LPG T ESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQE+KLWGKYGLERNVA ADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL Sbjct: 23 SPALAAEQTLPGATTESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQELKLWGKYGLERNVAMADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 414
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0D8J7_9BRAD (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A3S0D8J7_9BRAD) HSP 1 Score: 714 bits (1844), Expect = 2.860e-251 Identity = 367/393 (93.38%), Postives = 379/393 (96.44%), Query Frame = 3 Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354 MR PVGALLAFTAILAAG+VGLAVGRSSAPLPGWLSAVLPA AKPSSAQPAATG IVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTG HVR+GQPLMRIYGPNLSSAAAEYLSALNARPEAGI+ QALKGARRRLENLGAPD FIADIER REVPVY+NWPAPQDGEIVERTAVNGMRAAPGD+LFRIVD + VWVMVDVAERDLALIEVGQ VR RAYP+RPFTGKVTVIYP+L+ ETRTAR+RIELPNPDDVLRPDMYA+VEIATGT+ Sbjct: 1 MRWPVGALLAFTAILAAGVVGLAVGRSSAPLPGWLSAVLPAVAKPSSAQPAATGQIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGTHVRRGQPLMRIYGPNLSSAAAEYLSALNARPEAGISGQALKGARRRLENLGAPDGFIADIERTREVPVYLNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVDHDVVWVMVDVAERDLALIEVGQTAAVRLRAYPNRPFTGKVTVIYPHLKPETRTARIRIELPNPDDVLRPDMYADVEIATGTE 393
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001BA58B16 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA58B16) HSP 1 Score: 707 bits (1824), Expect = 3.190e-248 Identity = 363/394 (92.13%), Postives = 377/394 (95.69%), Query Frame = 3 Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQ-APEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354 MRRP+ AL +AILAAG++GLAVGRSS PLPGWLSA LPAAAK SSAQP A GPIVYYRDPDGAP YS+TP+KT SGK+YSAVR SED+SFEE+ APEAMTAK GERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERR+LNTMVRAPGTVQQDERRVSV+SLRFEGFIDTVDNVTTG HVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFI DIERARE+PVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRN VWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYA+VEIATGT+ Sbjct: 1 MRRPLSALFTLSAILAAGVLGLAVGRSSVPLPGWLSAALPAAAKQSSAQPTARGPIVYYRDPDGAPAYSLTPKKTSSGKDYSAVRTSEDLSFEEEEAPEAMTAKSGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRSLNTMVRAPGTVQQDERRVSVISLRFEGFIDTVDNVTTGTHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIVDIERAREIPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNVVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYADVEIATGTE 394
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0GDW7_9BRAD (TolC family protein n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0GDW7_9BRAD) HSP 1 Score: 684 bits (1764), Expect = 1.910e-240 Identity = 360/392 (91.84%), Postives = 380/392 (96.94%), Query Frame = 1 Query: 1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176 SPA AA+Q LPG T ESVVA+AKRLNPTVAAA+L+FDAAVHKIGTAGVLADPTLILEAWDVNR GVGQRRIG++QE KLWGKYGLERNVAQADADAAKFQGRATV +LIAQV+AAHGEYNAAYEAVG++ EIKRRYDE LGLLRSRYGTTSVD+QDVI+AEIEAATA+GDV+RRQGEQKAAAARLNALIGRPSLAPL APTGFR LKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQ+ADAWFSVDALR+VVQIYASRQLPP+RSS+DNARNGFQAGTSDLSSVFE+ERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL Sbjct: 5 SPAAAAEQSLPGATVESVVAIAKRLNPTVAAASLDFDAAVHKIGTAGVLADPTLILEAWDVNRFGVGQRRIGLEQEFKLWGKYGLERNVAQADADAAKFQGRATVVDLIAQVVAAHGEYNAAYEAVGISVEIKRRYDEILGLLRSRYGTTSVDQQDVIRAEIEAATAEGDVIRRQGEQKAAAARLNALIGRPSLAPLTAPTGFRTLKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQVADAWFSVDALRRVVQIYASRQLPPSRSSVDNARNGFQAGTSDLSSVFESERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 396
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI0003F82CBE (TolC family protein n=1 Tax=Bradyrhizobium sp. OHSU_III TaxID=1297865 RepID=UPI0003F82CBE) HSP 1 Score: 683 bits (1763), Expect = 5.300e-240 Identity = 360/392 (91.84%), Postives = 379/392 (96.68%), Query Frame = 1 Query: 1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176 SPA AA+Q LPG T ESVVA+AKRLNPTVAAA+L+FDAAVHKIGTAGVLADPTLILEAWDVNR GVGQRRIG++QE KLWGKYGLERNVAQ DADAAKFQGRATV +LIAQV+AAHGEYNAAYEAVG++ EIKRRYDE LGLLRSRYGTTSVD+QDVIKAEIEAATA+GDV+RRQGEQKAAAARLNALIGRPSLAPL APTGFR LKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQ+ADAWFSVDALR+VVQIYASRQLPP+RSS+DNARNGFQAGTSDLSSVFE+ERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL Sbjct: 23 SPAAAAEQSLPGATVESVVAIAKRLNPTVAAASLDFDAAVHKIGTAGVLADPTLILEAWDVNRFGVGQRRIGLEQEFKLWGKYGLERNVAQTDADAAKFQGRATVVDLIAQVVAAHGEYNAAYEAVGISVEIKRRYDEILGLLRSRYGTTSVDQQDVIKAEIEAATAEGDVIRRQGEQKAAAARLNALIGRPSLAPLTAPTGFRTLKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQVADAWFSVDALRRVVQIYASRQLPPSRSSVDNARNGFQAGTSDLSSVFESERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 414
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A3S0EBI1_9BRAD (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0EBI1_9BRAD) HSP 1 Score: 667 bits (1722), Expect = 8.780e-233 Identity = 338/393 (86.01%), Postives = 365/393 (92.88%), Query Frame = 3 Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354 MRRPVG LA AIL+AG+ GLAVGRS+APLPGW+SA+LPAAA P S +PA TGPI+YYRDPDG P+Y++ P+KT +GKEYSAV ASEDVSFEE +P+AM K G G+IKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGE DDDSSVK+SAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTG HVRKGQPLMRIYGPNLSSAAAEYLSALNARP+AGI+NQALKGARRRLENLGAPDAFI +IER REVPVYMNWPAPQDGEIVERTAVNGMRAAPGD+LFRIV+ VWVMVD+AERDLALIEVGQK VVR RAYPDRPFTGKVTVIYP+L+AETRTAR+RIELPNPDDVLRPDMYA+VEIATGT+ Sbjct: 1 MRRPVGNFLALFAILSAGLGGLAVGRSNAPLPGWISAMLPAAATPVSDRPAPTGPIIYYRDPDGVPNYALAPKKTAAGKEYSAVHASEDVSFEEPSPDAMPPKAGGAGKIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGELDDDSSVKISAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGTHVRKGQPLMRIYGPNLSSAAAEYLSALNARPDAGISNQALKGARRRLENLGAPDAFIGEIERTREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVNHEVVWVMVDIAERDLALIEVGQKAVVRLRAYPDRPFTGKVTVIYPHLKAETRTARIRIELPNPDDVLRPDMYADVEIATGTE 393
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A161QMA8_9BRAD (Transporter n=3 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A161QMA8_9BRAD) HSP 1 Score: 664 bits (1714), Expect = 1.090e-232 Identity = 347/391 (88.75%), Postives = 371/391 (94.88%), Query Frame = 1 Query: 4 PAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176 P AA+Q +PG T ESVVA+AKRLNPTVAAA+L+FDAAV K+GTAGV+ADPTLILEAWDVNRQGVGQRRIG DQEIKLWGKYGLERN+AQ+DADAAKFQGRATVTELIAQV+AAHGEYNAAYEAVG+ATEIKRRYDE LGLLRSRYGTTSVDRQDVIKAE+EAATA+GDVVRRQGEQK+AAARLNALIGRP+LAPLAAPTGFR ++ VSLAQ QAL RSANPMLALAGAQSNSAAQ KSLTDLNYYPDV +GAKYVQRPGTEDTGEF LGVKLPLHYEVKDAEQRAAGARLGAAQAR EALRLR+DGQIADAWF VDALRKVVQIY SR LPPARSS+DNARNGFQAG+SDLSSVFE+ERR RA+QLDLLKLKVELQTKYA+MERLAGGSL Sbjct: 17 PVAAAEQTMPGATVESVVAIAKRLNPTVAAASLDFDAAVRKVGTAGVMADPTLILEAWDVNRQGVGQRRIGFDQEIKLWGKYGLERNIAQSDADAAKFQGRATVTELIAQVVAAHGEYNAAYEAVGIATEIKRRYDELLGLLRSRYGTTSVDRQDVIKAEMEAATAEGDVVRRQGEQKSAAARLNALIGRPALAPLAAPTGFRTVRPVSLAQAQALGRSANPMLALAGAQSNSAAQIKSLTDLNYYPDVNVGAKYVQRPGTEDTGEFTLGVKLPLHYEVKDAEQRAAGARLGAAQARNEALRLRIDGQIADAWFGVDALRKVVQIYTSRLLPPARSSIDNARNGFQAGSSDLSSVFESERRYRAIQLDLLKLKVELQTKYADMERLAGGSL 407
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: A0A163XQ15_9BRAD (Efflux transporter periplasmic adaptor subunit n=4 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A163XQ15_9BRAD) HSP 1 Score: 647 bits (1670), Expect = 6.560e-225 Identity = 328/393 (83.46%), Postives = 357/393 (90.84%), Query Frame = 3 Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354 MRRPV ALL +A+L AG+ G+AVGRS+ PLPGW SA+ PA A PS AQPAAT PIVYYRDPDGAP+YS P+KT SG+EY A+R+SEDVSFEE+APE MTAKGG+ GRI+FYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAE RTLNTMVRAPGTV++DERR SVVSLRFEGFIDTV+NVTTG HV KGQPLMRIYGPNLSSAAAEYLSAL+ R + QALKGARRRLENLGAP+ FIADIERAREVPVY+ WPAPQDGEIVERTAVNGMRAAPG++LFRI D N VWVMVDVAERDLALIEVGQKV VRPRAYPDRPF GKVTVIYP+L+AETRTAR+RIELPNPD+VLRPDMYA+VEIATGT+ Sbjct: 1 MRRPVSALLIVSAVLVAGVAGVAVGRSNGPLPGWFSAIFPATADPSPAQPAATEPIVYYRDPDGAPNYSPAPKKTASGREYLAIRSSEDVSFEEKAPETMTAKGGQPGRIRFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAELRTLNTMVRAPGTVEEDERRKSVVSLRFEGFIDTVENVTTGTHVHKGQPLMRIYGPNLSSAAAEYLSALDGRATGALPIQALKGARRRLENLGAPETFIADIERAREVPVYVIWPAPQDGEIVERTAVNGMRAAPGEVLFRIADHNVVWVMVDVAERDLALIEVGQKVTVRPRAYPDRPFIGKVTVIYPHLKAETRTARIRIELPNPDEVLRPDMYADVEIATGTE 393
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001BA7C541 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BA7C541) HSP 1 Score: 644 bits (1660), Expect = 2.140e-223 Identity = 325/393 (82.70%), Postives = 357/393 (90.84%), Query Frame = 3 Query: 1176 MRRPVGALLAFTAILAAGMVGLAVGRSSAPLPGWLSAVLPAAAKPSSAQPAATGPIVYYRDPDGAPDYSMTPRKTPSGKEYSAVRASEDVSFEEQAPEAMTAKGGERGRIKFYRNPMGLPDTSPTPKKDSMGMDYLPVYEGEQDDDSSVKVSAGKLQKAGVQTEVAERRTLNTMVRAPGTVQQDERRVSVVSLRFEGFIDTVDNVTTGMHVRKGQPLMRIYGPNLSSAAAEYLSALNARPEAGINNQALKGARRRLENLGAPDAFIADIERAREVPVYMNWPAPQDGEIVERTAVNGMRAAPGDILFRIVDRNFVWVMVDVAERDLALIEVGQKVVVRPRAYPDRPFTGKVTVIYPNLRAETRTARVRIELPNPDDVLRPDMYAEVEIATGTD 2354 M RP+G LL +AI+ AG+ GLAVGRS+APLP WL VLPAAAK S Q A GPI+YYRDPDG P YS+TP+KT +GK+Y AVR+SED+SFE +APE MTAKGG+RG+I++YRNPMGLPDTSPTPKKDSMGM YLPVYEGEQDDDSSVKVSAGKLQKAGVQTE+AERRTLNTMVRAPG V++DERR SVVSLRFEGFIDTV NVTTG HV KGQPLMRIYGPNLSSAAAEYLSALNARP+AGI NQALKGARRRLENLGAPD+FIADIE RE+PVYMNWPAPQDGEIVERTAVNGMRAAPGD+LFRIVD + VWVMVDVAERDL LIEVGQKV VRPRAYPDRPF GKV++IYP+L+AETRTAR+RIEL NPDDVLRPDMYA+VEIATGT+ Sbjct: 1 MNRPIGVLLITSAIMVAGVFGLAVGRSNAPLPEWLDGVLPAAAKQSPRQGEAPGPILYYRDPDGLPAYSLTPKKTSAGKDYLAVRSSEDLSFEAKAPETMTAKGGDRGKIRYYRNPMGLPDTSPTPKKDSMGMAYLPVYEGEQDDDSSVKVSAGKLQKAGVQTELAERRTLNTMVRAPGIVEEDERRKSVVSLRFEGFIDTVGNVTTGTHVYKGQPLMRIYGPNLSSAAAEYLSALNARPDAGIGNQALKGARRRLENLGAPDSFIADIEHTREIPVYMNWPAPQDGEIVERTAVNGMRAAPGDVLFRIVDHDVVWVMVDVAERDLGLIEVGQKVTVRPRAYPDRPFIGKVSLIYPHLKAETRTARIRIELSNPDDVLRPDMYADVEIATGTE 393
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Match: UPI001FF98D97 (TolC family protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001FF98D97) HSP 1 Score: 638 bits (1645), Expect = 4.000e-222 Identity = 334/392 (85.20%), Postives = 366/392 (93.37%), Query Frame = 1 Query: 1 SPAMAADQILPGTTAESVVAVAKRLNPTVAAAALEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGIDQEIKLWGKYGLERNVAQADADAAKFQGRATVTELIAQVIAAHGEYNAAYEAVGVATEIKRRYDETLGLLRSRYGTTSVDRQDVIKAEIEAATADGDVVRRQGEQKAAAARLNALIGRPSLAPLAAPTGFRALKAVSLAQVQALARSANPMLALAGAQSNSAAQTKSLTDLNYYPDVTLGAKYVQRPGTEDTGEFMLGVKLPLHYEVKDAEQRAAGARLGAAQARGEALRLRVDGQIADAWFSVDALRKVVQIYASRQLPPARSSLDNARNGFQAGTSDLSSVFEAERRLRAVQLDLLKLKVELQTKYAEMERLAGGSL 1176 SPA A +Q +PG T ESVVA+AKRLNPTVAAA+LEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIG +Q++KLW KYGLER++A++DADAAKFQGRATVTELIAQV+AAHGEYNAAYEAV ++TEIKRR DE LGL+RSRYG TSVD+QDVI+AE+EAATA+GDVVRRQGE K+AAARLNALIGRPSLAPLA PTGFRA+K +SLAQ QALARSANPMLALAGAQSN+AAQTKSLTDLNYYPDVTLGAKYVQRPG EDTGEFMLGVKLPL Y+ KDAEQRAAG+RLGAAQAR EALRLR+DGQ+ADAW+SVDALRKVVQIYASRQ+P AR+SLD ARNGFQAGT+DL VFEAERRLR VQ+DLLKLKVELQ K AEMERLAGGSL Sbjct: 23 SPAAAGEQTMPGATVESVVAIAKRLNPTVAAASLEFDAAVHKIGTAGVLADPTLILEAWDVNRQGVGQRRIGFEQDLKLWSKYGLERDIARSDADAAKFQGRATVTELIAQVVAAHGEYNAAYEAVAISTEIKRRDDEILGLVRSRYGATSVDQQDVIRAEVEAATAEGDVVRRQGELKSAAARLNALIGRPSLAPLAPPTGFRAVKTISLAQAQALARSANPMLALAGAQSNAAAQTKSLTDLNYYPDVTLGAKYVQRPGMEDTGEFMLGVKLPLQYQAKDAEQRAAGSRLGAAQARNEALRLRIDGQVADAWYSVDALRKVVQIYASRQIPAARTSLDTARNGFQAGTTDLFFVFEAERRLRTVQIDLLKLKVELQMKSAEMERLAGGSL 414 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10400.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10400.1.1 >prot_P-wetherbeei_contig10400.1.1 ID=prot_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=472bp MVQRRCSPQSRADLRIAPIAACTIIPRQRAERFPGRHVRSFLGFRGGAQAback to top mRNA from alignment at P-wetherbeei_contig10400:1..2354- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10400.1.1 ID=mRNA_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2354bp|location=Sequence derived from alignment at P-wetherbeei_contig10400:1..2354- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10400:1..2354- >mRNA_P-wetherbeei_contig10400.1.1 ID=mRNA_P-wetherbeei_contig10400.1.1|Name=mRNA_P-wetherbeei_contig10400.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1416bp|location=Sequence derived from alignment at P-wetherbeei_contig10400:1..2354- (Phaeothamnion wetherbeei SAG_119_79)back to top |