mRNA_P-wetherbeei_contig15037.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15037.1.1
Unique NamemRNA_P-wetherbeei_contig15037.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig15037.1.1 vs. uniprot
Match: A0A1V5PMD0_9BACT (Flagellin N-methylase n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PMD0_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.330e-10
Identity = 40/148 (27.03%), Postives = 75/148 (50.68%), Query Frame = 1 
Query:    7 LEQLFHELEE-VYASYESARIKPSGNSCGTCSACCRAGASSVHNVTRLELAYLAHHL-----GSESSGRFQSYAARERDAK-GRLLYEVCPNYDQNQRGCSVYVHRPFSCRVFGTYAQVGSR--LPDKCVFEESVVRLERESFTEGVP 423
            +++ F+ L E +Y   +S       N C  C  CC   AS    +T LE  Y+  +L       E +  F+ Y  + ++    + L+ +CP Y+   +GCS+Y  RP SCR FG + +   +  +P++C  ++++    +++F+E +P
Sbjct:    1 MDEYFYNLTELIYKEVDSYLPVYKNNPCRECKICCTTLAS--QGLTSLEFDYMREYLIKNSRTDEEAENFRDYIDKLKNENLNQPLHLICPFYNLQAKGCSIYPARPLSCRTFGYFIKDERQYLIPEECYLKKNIKIYTKQTFSEIMP 146
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15037.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1V5PMD0_9BACT2.330e-1027.03Flagellin N-methylase n=1 Tax=bacterium ADurb.Bin3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15037contigP-wetherbeei_contig15037:755..1186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog370438.PTH_0621
PFAMsCxxCxxCC
Model size432
Max annot lvl2|Bacteria
KEGG koko:K06940
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.67e-05
EggNOG OGsCOG0727@1|root,COG0727@2|Bacteria
Descriptionmetal cluster binding
Cds size432
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186042.0631661-CDS-P-wetherbeei_contig15037:754..11861683186042.0631661-CDS-P-wetherbeei_contig15037:754..1186Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15037 755..1186 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15037.1.1prot_P-wetherbeei_contig15037.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15037 755..1186 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15037.1.1

>prot_P-wetherbeei_contig15037.1.1 ID=prot_P-wetherbeei_contig15037.1.1|Name=mRNA_P-wetherbeei_contig15037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MGLEQLFHELEEVYASYESARIKPSGNSCGTCSACCRAGASSVHNVTRLE
LAYLAHHLGSESSGRFQSYAARERDAKGRLLYEVCPNYDQNQRGCSVYVH
RPFSCRVFGTYAQVGSRLPDKCVFEESVVRLERESFTEGVPGGE
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mRNA from alignment at P-wetherbeei_contig15037:755..1186-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15037.1.1 ID=mRNA_P-wetherbeei_contig15037.1.1|Name=mRNA_P-wetherbeei_contig15037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig15037:755..1186- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCTGGAACAACTCTTTCACGAGCTCGAAGAAGTCTACGCTAGCTA
CGAATCGGCGCGGATTAAGCCTTCGGGAAATTCCTGCGGCACCTGTAGCG
CCTGCTGCCGGGCGGGGGCGTCGAGTGTCCACAATGTCACGCGCCTCGAA
CTTGCCTACCTGGCTCACCATCTAGGGAGCGAATCGAGCGGCCGATTTCA
AAGTTATGCCGCTCGCGAGAGAGATGCGAAAGGTCGCCTACTCTACGAAG
TTTGCCCCAACTATGACCAGAATCAGCGCGGCTGCAGTGTCTACGTCCAC
CGGCCGTTCTCTTGCAGAGTTTTCGGTACCTACGCGCAGGTGGGAAGTCG
CCTTCCCGATAAATGTGTCTTCGAAGAATCGGTCGTTCGTCTGGAGCGGG
AGTCCTTTACAGAAGGGGTCCCAGGTGGGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15037:755..1186-

>mRNA_P-wetherbeei_contig15037.1.1 ID=mRNA_P-wetherbeei_contig15037.1.1|Name=mRNA_P-wetherbeei_contig15037.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig15037:755..1186- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCTGGAACAACTCTTTCACGAGCTCGAAGAAGTCTACGCTAGCTA
CGAATCGGCGCGGATTAAGCCTTCGGGAAATTCCTGCGGCACCTGTAGCG
CCTGCTGCCGGGCGGGGGCGTCGAGTGTCCACAATGTCACGCGCCTCGAA
CTTGCCTACCTGGCTCACCATCTAGGGAGCGAATCGAGCGGCCGATTTCA
AAGTTATGCCGCTCGCGAGAGAGATGCGAAAGGTCGCCTACTCTACGAAG
TTTGCCCCAACTATGACCAGAATCAGCGCGGCTGCAGTGTCTACGTCCAC
CGGCCGTTCTCTTGCAGAGTTTTCGGTACCTACGCGCAGGTGGGAAGTCG
CCTTCCCGATAAATGTGTCTTCGAAGAATCGGTCGTTCGTCTGGAGCGGG
AGTCCTTTACAGAAGGGGTCCCAGGTGGGGAA
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