mRNA_P-wetherbeei_contig15036.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE) HSP 1 Score: 253 bits (645), Expect = 8.510e-72 Identity = 121/177 (68.36%), Postives = 143/177 (80.79%), Query Frame = 2
Query: 302 RGLVTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFDVV 832
+G VTD K ++V K R +LV SR ALEA + GFA L +SP A FL LLSHADWRVLL G++HVSG QV AVL WY FPASS+VPTW+++L+L L ED LRRFL+FVCG+PSLPA + G+VEITVRCQPRSA+LP AHTCF+QLDVP+YD E+VLRHKLL A+NNTASFDVV
Sbjct: 1789 KGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFLELLSHADWRVLLCGEEHVSGPQVVAVLTWYGFPASSEVPTWVKSLLLSLPEDALRRFLIFVCGTPSLPAPSAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKESVLRHKLLQAVNNTASFDVV 1965
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A835YG59_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG59_9STRA) HSP 1 Score: 204 bits (520), Expect = 6.080e-58 Identity = 110/202 (54.46%), Postives = 126/202 (62.38%), Query Frame = 2
Query: 299 GRGLVTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVE------------------------ITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFDVV 832
G G VT + FV+ KVRH+LV SR AAL A G GL +SP A +RLL+ ADWRVLL G HVS AQV + LRWYNFP +S VP WL AL+L L ED LRRFLVFVCGSPSLP A+ ITVRCQPRSA+LPVAHTCF LDVP+Y +EA LR KLL A+ A+FD+V
Sbjct: 305 GGGAVTAGNRAQFVQAKVRHILVASREAALAAAAAGVTRGLADLSPEAPSLMRLLAPADWRVLLCGDTHVSSAQVVSALRWYNFPPASGVPRWLPALLLSLGEDTLRRFLVFVCGSPSLPPASGSXXXXXXXXXXXXXXXXXXXXXXXXFAVITVRCQPRSAALPVAHTCFLHLDVPDYASEAALRRKLLQAVTEAATFDLV 506
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A7S2WLZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLZ2_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.910e-41 Identity = 86/172 (50.00%), Postives = 112/172 (65.12%), Query Frame = 2
Query: 311 VTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFD 826
V+DA K +FV +K R+VLV RLA LEA R GF + +SP ATPFLRLLS ADW VLL G+ +++ V L + FP SS++P WL +L S D LRRFL+F GSPSLP AA I V+ S SLPVAHTCF++LD+P+Y +++ KL+ A+ A+FD
Sbjct: 1449 VSDANKAEFVHMKARYVLVECRLAQLEAIRSGFWQAMMDLSPEATPFLRLLSSADWSVLLCGEDNLTPEAVTDCLEFRGFPKSSKIPKWLPQTILQFSPDNLRRFLIFCTGSPSLPPAA-SDTRIGVQYNRPSNSLPVAHTCFFKLDLPDYPDQSIFVEKLMKAIQECATFD 1619
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A7S2SAI4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAI4_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.490e-41 Identity = 80/162 (49.38%), Postives = 104/162 (64.20%), Query Frame = 2
Query: 341 RLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFD 826
R + R+VLV RLA LEA R GF + +SP ATPFLRLLS ADW VLL G+ +++ V L + FP SS++P WL +L S D LRRFL+F GSPSLP AA I V+ S SLPVAHTCF++LD+P+Y +++ KL+ A+ A+FD
Sbjct: 7 RAQARYVLVECRLAQLEAIRSGFWQAMMDLSPEATPFLRLLSSADWSVLLCGEDNLTPEAVTDCLEFRGFPKSSKIPKWLPQTILQFSPDNLRRFLIFCTGSPSLPPAA-SDTRIGVQYNRPSNSLPVAHTCFFKLDLPDYPDQSIFVEKLMKAIQECATFD 167
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A8J2SKZ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKZ0_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.920e-35 Identity = 86/179 (48.04%), Postives = 104/179 (58.10%), Query Frame = 2
Query: 299 GRGLVTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLL-SGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFDVV 832
G VT+A K FV LKVR LV R ALEA R GF L ++SP A PFL+L S DWRVLL + ++ +V L + +P S VP LR V +D LRRFLVF GSP LP+A EI VR QPRS +LPVAHTCF+ LD+P+Y E KL A+ +FD V
Sbjct: 416 GARAVTEANKHAFVVLKVRRALVGRRRDALEAIRRGFVAALRELSPEAAPFLKLFSSTDWRVLLCADDDRLTPDRVLDALAFVGWPKRSVVPDALRRSVRAFDKDSLRRFLVFATGSPGLPSAP--GFEIQVRAQPRSPALPVAHTCFFHLDIPDYADEGEFVAKLTTAILECGTFDRV 592
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A7S3JMR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMR1_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.840e-34 Identity = 78/176 (44.32%), Postives = 109/176 (61.93%), Query Frame = 2
Query: 311 VTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSE-DMLRRFLVFVCGSPSLPAAAVGR-VEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASFDVV 832
VT+A K FV LKVR +L R+ +L A GF T L ++SP A+P L+LLS DWR+LL+ +++ +V L + FP +S +P L+ + S D LRRFLVF GSP++P GR + I VRC P S +LPVAHTCF+ LD+P+Y+ E K +A++ +SFD V
Sbjct: 1528 VTEANKHQFVVLKVRWILTGCRVESLNALGQGFHTALSELSPEASPLLKLLSSTDWRLLLTADDNLTPERVLDTLDFVGFPKTSIIPEALKRTIESFSNTDSLRRFLVFTTGSPTIPND--GRDLRIQVRCLPLSGALPVAHTCFFHLDIPDYEDEGTFITKFTMALHECSSFDRV 1701
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: D8LAX6_ECTSI (Outermembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 4.370e-17 Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 2
Query: 302 RGLVTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRV 679
+G VTD K ++V K R +LV SR ALEA + GFA L +SP A F+ LLSHADWRVLL G++HVSG Q P P W + VL L L VF G +P + G+V
Sbjct: 1664 KGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFVELLSHADWRVLLCGEEHVSGPQGGGGFPLVGVPGWQGGPHWGKVFVLLLPGRPLGTVFVFGVGDALVPGSFRGQV 1789
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: D3B9B5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9B5_POLPP) HSP 1 Score: 92.0 bits (227), Expect = 1.400e-16 Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 2
Query: 308 LVTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLL 796
LVTD K DF++ + +L+ SR L+AF+ GF + + L S + ++L+ G Q V + +++ FPASS P +++ +++D L RFL F+ G +P + + +++ P+S LP AHTC YQLD+P+Y +L+ K+L
Sbjct: 1457 LVTDDNKEDFIQKNIDKILIGSRKYQLDAFKSGFMS-----IESLNAHFALFSPTELQLLMCGNQLVDAELLKRHIKFVGFPASSDTPKHFLSVIDAMTQDELHRFLRFLTGMVVIPMQGLEK-PLSIIHIPKSEKLPCAHTCSYQLDLPDYSNFELLKKKIL 1613
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A7S4L4Z5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L4Z5_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 2.080e-16 Identity = 57/185 (30.81%), Postives = 92/185 (49.73%), Query Frame = 2
Query: 275 STNPYSRYGRGL-VTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITV-RCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLLLAMNNTASF 823
+T+P G + +T+A + ++V L +H+L S AFR GF G S L LL + +L+ G + ++ V ++Y F +S LV G++ ++ L F+ G+ +P VG++ + + R SLPVAHTCF QL +PNY +L KL++A+NN F
Sbjct: 645 NTHPLKPGGSDIPLTNANRNEYVDLYAKHILADSIERQFSAFRKGFMRLCGGNS------LALLKPEELELLVCGNPEIDFHKLEEVSQYYGFSETSTTIRHFWELVHGMTTANKKKLLFFITGTNRVPFEGVGQISLNISRSHAPKTSLPVAHTCFNQLVLPNYQNRKLLEEKLIIAINNAEGF 823
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Match: A0A8J4PNL3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PNL3_9MYCE) HSP 1 Score: 91.3 bits (225), Expect = 2.520e-16 Identity = 53/162 (32.72%), Postives = 88/162 (54.32%), Query Frame = 2
Query: 311 VTDATKGDFVRLKVRHVLVVSRLAALEAFRDGFATGLGQISPAATPFLRLLSHADWRVLLSGQQHVSGAQVAAVLRWYNFPASSQVPTWLRALVLGLSEDMLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNYDAEAVLRHKLL 796
V D K DF++ + VL+ R + LE+F+ GF + I T F +L S + ++L+ G V + ++ FP+ SQ PT+ ++ +S+D L FL F+ G +P + + +++ P+S LP AHTC YQLD+P+Y+ +L+ KLL
Sbjct: 1465 VNDLNKEDFIKRNIDKVLIGCRQSRLESFKSGFMS----IESLNTHF-KLFSPTELQLLMCGNTLVDANMLQKNFKFIGFPSDSQTPTYFSKVIEKMSQDELHLFLRFLTGMVVIPLEGLEK-PLSIVYIPKSDKLPSAHTCSYQLDLPDYNDHDILQKKLL 1620 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15036.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15036.1.1 >prot_P-wetherbeei_contig15036.1.1 ID=prot_P-wetherbeei_contig15036.1.1|Name=mRNA_P-wetherbeei_contig15036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp MLRRFLVFVCGSPSLPAAAVGRVEITVRCQPRSASLPVAHTCFYQLDVPNback to top mRNA from alignment at P-wetherbeei_contig15036:140..1386+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15036.1.1 ID=mRNA_P-wetherbeei_contig15036.1.1|Name=mRNA_P-wetherbeei_contig15036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1247bp|location=Sequence derived from alignment at P-wetherbeei_contig15036:140..1386+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15036:140..1386+ >mRNA_P-wetherbeei_contig15036.1.1 ID=mRNA_P-wetherbeei_contig15036.1.1|Name=mRNA_P-wetherbeei_contig15036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=225bp|location=Sequence derived from alignment at P-wetherbeei_contig15036:140..1386+ (Phaeothamnion wetherbeei SAG_119_79)back to top |